CuGenDBv2

Gene ID	Tan0000429
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L2, chloroplastic
Genome location	LG05:27170601..27172087
RNA-Seq Expression	Tan0000429
Synteny	Tan0000429
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002171 - Ribosomal protein L2 IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR014726 - Ribosomal protein L2, domain 3 IPR022666 - Ribosomal Proteins L2, RNA binding domain IPR022669 - Ribosomal protein L2, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7944041.1 hypothetical protein I3843_15G077700, partial [Carya illinoinensis]

7.2e-70

60.95

Show/hide

Query:  IHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEKRY
        IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEKRY
Subjt:  IHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEKRY

Query:  ILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI--------------
        ILH   AIIGDTIV+ T EVPIKM NALPLKKSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +              
Subjt:  ILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI--------------

Query:  ---------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLIL
                                         P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLIL
Subjt:  ---------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLIL

QDH07784.1 ribosomal protein L2 [Cucumis sativus]

1.9e-70

61.21

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL KSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

QVG61285.1 ribosomal protein L2 [Geum rupestre var. rupestre]

3.8e-71

60.5

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPLK+STSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRRSRKRNKYSDNLI+RRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

YP_009574711.1 ribosomal protein L2 [Carya illinoinensis]

7.2e-70

59.72

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Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPL       +KSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

YP_010032126.1 ribosomal protein L2 [Castanopsis mekongensis]

7.2e-70

59.72

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPLK       +STSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

TrEMBL top hits

e value

%identity

Alignment

A0A411PPH5 50S ribosomal protein L2, chloroplastic

3.5e-70

59.72

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPL       +KSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

A0A411PVF1 50S ribosomal protein L2, chloroplastic

3.5e-70

59.72

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPL       +KSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPL-------KKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

A0A513U0P5 50S ribosomal protein L2, chloroplastic

3.5e-70

59.72

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPLK       +STSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

A0A513X1K1 50S ribosomal protein L2, chloroplastic

9.2e-71

61.21

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL KSTSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

A0A7S6ZNY8 Ribosomal protein L2

3.5e-70

59.72

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----
        RYILH   AIIGDTIV+ T EVPIKM NALPLK       +STSTDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +     
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLK-------KSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI-----

Query:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                                  P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  ------------------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

SwissProt top hits

e value

%identity

Alignment

Q09MB2 50S ribosomal protein L2, chloroplastic

2.0e-70

59.43

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRR+K
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Q2MI59 50S ribosomal protein L2, chloroplastic

2.0e-70

59.43

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Q2MIE6 50S ribosomal protein L2, chloroplastic

2.0e-70

59.43

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Q4VZK5 50S ribosomal protein L2, chloroplastic

8.8e-71

59.79

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK  ATPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Q8S8V3 50S ribosomal protein L2-A, chloroplastic

2.0e-70

59.43

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLIYGQ                   GGHKR+Y  K  FRRNEKDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL KG      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRRSRKRNKYSDNLILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00830.1 ribosomal protein L2

3.6e-67

56.94

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLI GQ                   GGHKR+Y  K  FRRN KDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL +G      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRR+RKR KYS+ LILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

ATCG01310.1 ribosomal protein L2

3.6e-67

56.94

Show/hide

Query:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK
        M IHLYKTSTPSTRNG VDSQVK NP NNLI GQ                   GGHKR+Y  K  FRRN KDIYG IVTIEYD NRNA ICLIHYGDGEK
Subjt:  MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSL----------------GGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEK

Query:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------
        RYILH   AIIGDTIV+ T EVPIKM NALPL     TDMPLGT IHNIEITL +G      A  VAK IAKEGKSATLKLPSG   +            
Subjt:  RYILHLIWAIIGDTIVTFTYEVPIKMRNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTI------------

Query:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK
                                           P GG +  APIGRK   TPWGYPA GRR+RKR KYS+ LILRRRSK
Subjt:  -----------------------------------PTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGTCGTAGACAGTCAAGTAAAATTCAATCCACTTAATAATTTGATCTATGGACAAACATCGTT
GGGAGGTCATAAGCGTGTATATACAGTAAAATCGATTTTTCGACGGAATGAAAAAGACATATATGGTGGAATCGTAACCATAGAATACGACCTTAATCGAAATGCATGCA
TTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCTCATATGGGCTATAATTGGAGATACTATTGTTACGTTTACGTACGAAGTTCCTATAAAAATG
AGAAATGCCCTACCTTTGAAAAAATCTACTTCAACCGATATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTAGGAAGGGGACAATTAGTTGGAGCAAAGC
AGTCTTTGTAGCTAAACCGATTGCAAAAGAAGGAAAATCGGCCACATTAAAATTACCTTCCGGGAGGAGTACCATCCCCACGGGGGGGTGGAAGAAGGAGGCCCCAATTG
GTAGAAAAACCCATGCAACCCCTTGGGGTTATCCTGCACATGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVIHLYKTSTPSTRNGVVDSQVKFNPLNNLIYGQTSLGGHKRVYTVKSIFRRNEKDIYGGIVTIEYDLNRNACICLIHYGDGEKRYILHLIWAIIGDTIVTFTYEVPIKM
RNALPLKKSTSTDMPLGTTIHNIEITLRKGTISWSKAVFVAKPIAKEGKSATLKLPSGRSTIPTGGWKKEAPIGRKTHATPWGYPAHGRRSRKRNKYSDNLILRRRSK

Tan0000429 (gene) of Snake gourd v1 genome