CuGenDBv2

Gene ID	Tan0000431
Organism	Trichosanthes anguina (Snake gourd v1)
Description	40S ribosomal protein S3a
Genome location	LG10:6699461..6701755
RNA-Seq Expression	Tan0000431
Synteny	Tan0000431
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

1.3e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  EGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

XP_022974423.1 40S ribosomal protein S3a isoform X1 [Cucurbita maxima]

1.0e-139

98.47

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  EG TEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

1.8e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE ATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

XP_023527182.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]

2.3e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE ATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

4.6e-140

98.47

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM+NQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  EGATEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P6 40S ribosomal protein S3a

1.9e-139

97.7

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADE   EGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

A0A1S3AXI4 40S ribosomal protein S3a

6.5e-140

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  EGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

A0A5D3CZ21 40S ribosomal protein S3a

1.9e-139

97.7

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADE   EGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

A0A6J1IG66 40S ribosomal protein S3a

5.0e-140

98.47

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  EG TEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

A0A6J1IW45 40S ribosomal protein S3a

8.5e-140

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE ATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

2.6e-130

89.66

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFEISLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K+ERPADE  AEG TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

P33444 40S ribosomal protein S3a

6.1e-127

87.4

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEGL+HRVFEISLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K++RPA+EA AE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVERPADEAPAEGATEIVGA

P49198 40S ribosomal protein S3a

1.6e-127

86.97

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RPA+EA  E ATE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

Q285L8 40S ribosomal protein S3a

1.8e-126

86.97

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RPADE  AE   EI GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

Q8GTE3 40S ribosomal protein S3a

2.4e-131

91.57

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFEISLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KVE PADE   EG  EIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

7.7e-125

84.73

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVERPADEAPAEGATEIVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKV+RPADE   E  TEI+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVERPADEAPAEGATEIVGA

AT4G34670.1 Ribosomal protein S3Ae

5.9e-125

85.5

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVERPADEAPAEGATEIVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKV+RPADE   E  TEI+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVERPADEAPAEGATEIVGA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCACCTTCAGT
TTTCACTGTTAAAAATGTCGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGCTTCTGAGGGACTCAAACATAGAGTCTTCGAGATCTCGTTGGCTGATCTTC
AGGATGATGAGGAGCACGCTTACAGGAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACTGACAAGTTG
AGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACTGACAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGACC
AAACCAGGTGAAAAGGACCTGTTACGCACAATCCAGCCAGATCAGGCAGATCCGTCGTAAGATGAGGGAGATCATGGTAAACCAGGCAACCTCTTGTGATTTGAAGGAAT
TGGTTCGCAAGTTCATTCCAGAGTCAATTGGCAAGGAGATTGAAAAGGCAACTTCCAGCATCTACCCTCTCCAAAATGTGTTTATCAGGAAAGTTAAAATTTTGAAAGCT
CCCAAATTCGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGTGTGAAGGTTGAGAGACCTGCCGACGAAGCCCCGGCAGAGGGGGCTACCGA
AATTGTTGGAGCATGA

mRNA sequence

Show/hide mRNA sequence

TATATAAACGCAGAATTTAGGGTTTTGGAGGCTCTCAAACTTTCTCTGCCGTGCAGCATAATATCTGCAGAGTTAGGGCAACTCACCTCCTCCTCCAGCCATGGCCGTCG
GTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCACCTTCAGTTTTCACTGTT
AAAAATGTCGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGCTTCTGAGGGACTCAAACATAGAGTCTTCGAGATCTCGTTGGCTGATCTTCAGGATGATGA
GGAGCACGCTTACAGGAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACTGACAAGTTGAGGTCTTTAG
TACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACTGACAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGACCAAACCAGGTG
AAAAGGACCTGTTACGCACAATCCAGCCAGATCAGGCAGATCCGTCGTAAGATGAGGGAGATCATGGTAAACCAGGCAACCTCTTGTGATTTGAAGGAATTGGTTCGCAA
GTTCATTCCAGAGTCAATTGGCAAGGAGATTGAAAAGGCAACTTCCAGCATCTACCCTCTCCAAAATGTGTTTATCAGGAAAGTTAAAATTTTGAAAGCTCCCAAATTCG
ATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGTGTGAAGGTTGAGAGACCTGCCGACGAAGCCCCGGCAGAGGGGGCTACCGAAATTGTTGGA
GCATGAGTTCAGTTATGTTGAATTTCATTTGAGTTGGATTAATCTTTTTTTGTTTAATTTTGTCCCCTTTGTTTACAAACTTAGTTTTAACCCACTTCTCGGTCTAGTCA
GAGAGTTGGTTTTAAGGATCGCAATTTTGTGCTACAAGTCCTTAGTCAAGAATACTTTCATCGAATTAATTTAGCAAATTGCACCGTTTTTTTTACTGAACATGTTTTAA
ATGGATCGTTGCTATACCCAATCTTTATTATCATGTCGTATCTGGTGTGTAATTTTATTTTTTCATTTTTGGTGCGTGTTATTATCTGACCCCAACTTGGTTATATGTGA
ACGGTGAGCTAGTTGCTATATCAATT

Protein sequence

Show/hide protein sequence

MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVERPADEAPAEGATEIVGA

Tan0000431 (gene) of Snake gourd v1 genome