CuGenDBv2

Gene ID	Tan0000433
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nucleolin 1
Genome location	LG04:87167979..87170064
RNA-Seq Expression	Tan0000433
Synteny	Tan0000433
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR008984 - SMAD/FHA domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7018280.1 hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.4e-126

81.33

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFEVIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
         +WF+LNKI  FEEGE+I            +R SDSEDIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSD+DEDYGRK+K  VRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED
        KRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSKD  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   DDEE+D
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

XP_022152655.1 protein bfr2 [Momordica charantia]

9.1e-140

86.33

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLV+ EPVTIFGRGSGF SKDRTVSRRH+LIEAKTSEN +GAP E  +SFEVIGRNPIWVRSG+NG+IR FRRSEKGE+APGESFCVGGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P WFKLNKIA  EEG++I PK E++F ERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE RK SD+DEDYGR+K+RGVRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED
        KRKKGANSDDEDWTDENEDAVEM AK+KK QRPKYSTRSKDH KT+KDQ KAA SNK YDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD+E++
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

XP_022955501.1 uncharacterized protein LOC111457508 [Cucurbita moschata]

1.7e-125

80.67

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVT FGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFEVIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P+WF+LNKIA FEEGE+I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSD+DEDYGRK+K  VRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED
        KRKKGAN+DDEDWTDENEDAVEM  K+KKFQRP+YSTRS D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   D EE+D
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

XP_022980683.1 protein BFR2 [Cucurbita maxima]

1.2e-126

81.67

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Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSR HILI+AKTSENSNG P E  VSFEVIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P+WF+LNKIA FEEGE+I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSD++EDYGRK+K  VRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE
        KRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSKD  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD E++
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE

XP_038898830.1 protein PIF [Benincasa hispida]

3.0e-127

81.76

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Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF SKDRTVSRRHILIEAKTSENSNGAP E  VSFEVIGRNPIWVRS +NG+IR FRRSEKGEMA GESFCVG QE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        PIWF+LNKIA FEE +Q             +RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLDE RKDSD+DEDYGRKKKRGV+G
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDED-----EEEEF
        KRKKGANSDDEDWTDENEDAVEM  K+KKF+RPKYSTRSKD +KT  DQKKAA+SNK YD   EEDEDDETLGGFIVDDE DN EQMDED     EEEEF
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDED-----EEEEF

Query:  SDDDEEE
        SDDDEE+
Subjt:  SDDDEEE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHB4 nucleolin 1

9.8e-124

79.61

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF SKDRT+SRRHILIEAKTS+N+NGAP E  VSFEVIGRNPIWVRS +NG+IR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDS-DEDEDYGRKKKRGVR
        PIWF+LNKI  FEEG+ +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS D+DEDY RKKKRGVR
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDS-DEDEDYGRKKKRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+M  K +K QRPKYSTRSKD  K   DQ+KAAKSNK YD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  EEED
        ++E+
Subjt:  EEED

A0A5D3BXV5 Nucleolin 1

9.8e-124

79.61

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF SKDRT+SRRHILIEAKTS+N+NGAP E  VSFEVIGRNPIWVRS +NG+IR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDS-DEDEDYGRKKKRGVR
        PIWF+LNKI  FEEG+ +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS D+DEDY RKKKRGVR
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDS-DEDEDYGRKKKRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+M  K +K QRPKYSTRSKD  K   DQ+KAAKSNK YD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  EEED
        ++E+
Subjt:  EEED

A0A6J1DEJ6 protein bfr2

4.4e-140

86.33

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLV+ EPVTIFGRGSGF SKDRTVSRRH+LIEAKTSEN +GAP E  +SFEVIGRNPIWVRSG+NG+IR FRRSEKGE+APGESFCVGGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P WFKLNKIA  EEG++I PK E++F ERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE RK SD+DEDYGR+K+RGVRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED
        KRKKGANSDDEDWTDENEDAVEM AK+KK QRPKYSTRSKDH KT+KDQ KAA SNK YDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD+E++
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

A0A6J1GTX9 uncharacterized protein LOC111457508

8.1e-126

80.67

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVT FGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFEVIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P+WF+LNKIA FEEGE+I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSD+DEDYGRK+K  VRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED
        KRKKGAN+DDEDWTDENEDAVEM  K+KKFQRP+YSTRS D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   D EE+D
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

A0A6J1J012 protein BFR2

5.6e-127

81.67

Show/hide

Query:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE
        ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSR HILI+AKTSENSNG P E  VSFEVIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE
Subjt:  MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG
        P+WF+LNKIA FEEGE+I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSD++EDYGRK+K  VRG
Subjt:  PIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE
        KRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSKD  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD E++
Subjt:  KRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13780.1 SMAD/FHA domain-containing protein

8.1e-54

43.45

Show/hide

Query:  MEVAGEDGSKLVLREPV-TIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNG-KIRAFRRSEKGEMAPGESFCVGG
        ME+ GEDG+KL L+  V  +FGRG+GF ++D TVSRRH+ +  K +  + G     +VSFEV+GRNP+W+R+   G KI+  R+ E GE+A G+ FCV G
Subjt:  MEVAGEDGSKLVLREPV-TIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNG-KIRAFRRSEKGEMAPGESFCVGG

Query:  QEPIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFL-DEVRKDSDEDEDYGRKKKRG
          PIWF L              K  +E +E   R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD K+W+WFL D    +SD DED  +K ++G
Subjt:  QEPIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFL-DEVRKDSDEDEDYGRKKKRG

Query:  VRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNK----------VYDEEDEDDETLGGFIVDDEVDNEEQMDED
        +  KR++   ++D+DW+ E+++  E+  KSK+   P YSTRSK   KT KD   ++ S+             +EED+DDETLGGFIV DE    E+ +E+
Subjt:  VRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNK----------VYDEEDEDDETLGGFIVDDEVDNEEQMDED

Query:  EEEEFSDDDEEED
        E+E   DD+E+ED
Subjt:  EEEEFSDDDEEED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGTAGCCGGCGAAGACGGTTCAAAGTTAGTTCTAAGAGAGCCGGTGACAATCTTCGGAAGAGGCTCAGGTTTCGGTTCAAAAGATCGAACAGTATCCCGTCGTCA
CATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCACGGAGTCTTTGGTTTCCTTCGAGGTTATCGGGAGGAACCCTATCTGGGTTCGTAGCGGCAGAA
ATGGCAAAATCAGAGCATTTAGAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGATTTGGTTCAAATTAAACAAAATCGCT
GCATTCGAAGAAGGGGAGCAAATTGGTCCGAAGATCGAGAACGAATTTGTTGAAAGATTGACGCGTTCTTCGGATTCGGAGGATATCGATGTTTCTGGCATTGATCCTGT
CAAAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGGTGAGAAAAGACA
GTGATGAAGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTTAGGGGAAAGAGGAAAAAAGGAGCAAATAGTGATGACGAAGATTGGACAGATGAGAATGAAGATGCT
GTGGAAATGACTGCAAAATCAAAGAAGTTTCAAAGACCAAAATACTCCACAAGATCAAAAGATCACTATAAAACTCACAAGGATCAAAAGAAAGCTGCTAAATCTAATAA
AGTCTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTCGG
ACGATGATGAGGAGGAAGATTGA

mRNA sequence

Show/hide mRNA sequence

GCGACACGTCGGGAAGGAACCGAAGCTTCGAATCTAAGCCACCGCTCGGCGACGGCGGGCAAAAAAGAAAACGTTCCGAAATTTCAGCTAAAATTTTCGGAGCAGCACTT
AAAATCAATGGAGGTAGCCGGCGAAGACGGTTCAAAGTTAGTTCTAAGAGAGCCGGTGACAATCTTCGGAAGAGGCTCAGGTTTCGGTTCAAAAGATCGAACAGTATCCC
GTCGTCACATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCACGGAGTCTTTGGTTTCCTTCGAGGTTATCGGGAGGAACCCTATCTGGGTTCGTAGC
GGCAGAAATGGCAAAATCAGAGCATTTAGAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGATTTGGTTCAAATTAAACAA
AATCGCTGCATTCGAAGAAGGGGAGCAAATTGGTCCGAAGATCGAGAACGAATTTGTTGAAAGATTGACGCGTTCTTCGGATTCGGAGGATATCGATGTTTCTGGCATTG
ATCCTGTCAAAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGGTGAGA
AAAGACAGTGATGAAGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTTAGGGGAAAGAGGAAAAAAGGAGCAAATAGTGATGACGAAGATTGGACAGATGAGAATGA
AGATGCTGTGGAAATGACTGCAAAATCAAAGAAGTTTCAAAGACCAAAATACTCCACAAGATCAAAAGATCACTATAAAACTCACAAGGATCAAAAGAAAGCTGCTAAAT
CTAATAAAGTCTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAA
TTTTCGGACGATGATGAGGAGGAAGATTGATGGAGCTAATGGTTTTGGTTGTTGACTGCTGCTAACCTAGGCTTGCTCTAGAAAGGTTTGTCTTTGTATAGTACTTTCCT
TTTTAGTCTCATAATCTTGTGAAATATAGAAGAAAGATCAGTTATGCTGTAGTTCAAATTGTAGGTTGAAAGTGATCTTCAGTTTCTTCTCCAATGGTTGATTATTTTCG
ATGTTGAAAAATTTGATAGCCTTCTTGTAATCTTCTTTTGTCTCTTGTTCTAAGGTTGAGCATCTCATCTCCTTTACAGACTTCTTTCCTAAACTTCCATTTATCTGAAT
TATTATTGTTTTCCTCTTAA

Protein sequence

Show/hide protein sequence

MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIA
AFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDA
VEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

Tan0000433 (gene) of Snake gourd v1 genome