; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000449 (gene) of Snake gourd v1 genome

Gene IDTan0000449
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:109237536..109238274
RNA-Seq ExpressionTan0000449
SyntenyTan0000449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591970.1 hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4354.09Show/hide
Query:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHC-----GGYVCPPD
        M+VTKN FLVGLL FLCL+LSSANRVLK+N+AE E ++N+V SEQD+Q L +F+  EL S + +G++P+ SS+G   GDC   G +C     GGY  PP+
Subjt:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHC-----GGYVCPPD

Query:  Y------------SCGGNSGCPSYYTCMPCQWQGC---QGCQGCQ--------GCQGCQI-SPPCGCEVGAIENSKVQ-ESIQIAEPDPPRIVPPVHPAN
        Y            S GG+SGC   YT  PC WQGC   QGCQGCQ        GCQGCQ   PPC  EVG + +SK+Q ESI + E +P    PPV P N
Subjt:  Y------------SCGGNSGCPSYYTCMPCQWQGC---QGCQGCQ--------GCQGCQI-SPPCGCEVGAIENSKVQ-ESIQIAEPDPPRIVPPVHPAN

Query:  HNIKSSGGANQDMKSIGGPV
        H+IKSSGGANQDMKS GG V
Subjt:  HNIKSSGGANQDMKSIGGPV

KAG6607873.1 hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4556.99Show/hide
Query:  FMKMSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYS
        F KM+VTK+  LV LL+ LCL+ SSANRVLKDN++ENESI+NSV   Q+ + LHNF   ELN+ V +GSIP+F S      DCCN+G+H GGYVCPP+++
Subjt:  FMKMSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYS

Query:  CGGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDPPRIVPPVHPANHNIKSSGGANQDMKSIGGPV
        CG NSGC  YY+C PCQW            +   + PPCGC VG    S VQESIQ +E D    VP V PANHNIK SGGANQ+MKS GG V
Subjt:  CGGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDPPRIVPPVHPANHNIKSSGGANQDMKSIGGPV

KGN55137.1 hypothetical protein Csa_012773 [Cucumis sativus]1.2e-3846.54Show/hide
Query:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYSC--
        M+VT+   LVGLL FLCL+L SANR+LK+N+AEN+ I + VPS +++    N +  EL S +   S+ + SSI P+NGDCC+YG +CG Y  PP   C  
Subjt:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYSC--

Query:  ------------------------GGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDP-PRIVPPVHPANHNI
                                GG+S C S  TC  CQWQGC GCQ CQGCQGCQ    CGC+    ++   Q+S+Q  EP P   IVPP  P +++I
Subjt:  ------------------------GGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDP-PRIVPPVHPANHNI

Query:  KSSGGANQDMKSIGGPV
        KSSGG+NQD+KS GG V
Subjt:  KSSGGANQDMKSIGGPV

XP_023535133.1 mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]8.5e-4252.42Show/hide
Query:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHC-----GGYVCPPD
        M+VTK+ FLVGLL FLCL+LSSANRVLK+N+AE E +SN+V SEQD+Q L +F+  EL S + +G++P+ SS+G   GDC   G +C     GGY  PP+
Subjt:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHC-----GGYVCPPD

Query:  Y------------SCGGNSGCPSYYTCMPCQWQGC---QGCQGCQ---------------GCQGCQI-SPPCGCEVGAIENSKVQ-ESIQIAEPDPPRIV
        Y            S GG+SGC   YT  PC WQGC   QGCQGCQ               GCQGCQ   PPC  EVG + +SK+Q ESI + E +P    
Subjt:  Y------------SCGGNSGCPSYYTCMPCQWQGC---QGCQGCQ---------------GCQGCQI-SPPCGCEVGAIENSKVQ-ESIQIAEPDPPRIV

Query:  PPVHPANHNIKSSGGANQDMKSIGGPV
        PPV P NH+IKSSGGANQDMKS GG V
Subjt:  PPVHPANHNIKSSGGANQDMKSIGGPV

TrEMBL top hitse value%identityAlignment
A0A0A0L3F6 Uncharacterized protein5.6e-3946.54Show/hide
Query:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYSC--
        M+VT+   LVGLL FLCL+L SANR+LK+N+AEN+ I + VPS +++    N +  EL S +   S+ + SSI P+NGDCC+YG +CG Y  PP   C  
Subjt:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPMNGDCCNYGHHCGGYVCPPDYSC--

Query:  ------------------------GGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDP-PRIVPPVHPANHNI
                                GG+S C S  TC  CQWQGC GCQ CQGCQGCQ    CGC+    ++   Q+S+Q  EP P   IVPP  P +++I
Subjt:  ------------------------GGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDP-PRIVPPVHPANHNI

Query:  KSSGGANQDMKSIGGPV
        KSSGG+NQD+KS GG V
Subjt:  KSSGGANQDMKSIGGPV

A0A5A7V9R7 Uncharacterized protein9.9e-0468.42Show/hide
Query:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESIS
        M+VTK   LVGLL FLCL+LSSANR+LK+N+AEN+ I+
Subjt:  MSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCCTCCGGACTCTTAGGCCAAACCAATGCCAATGCTTTTGTTGCTTTTAAAAGTACTCAACTTCCTCCTGAAAAGAGAGATCAAAGTTTCATGAAAATGTCTGT
TACAAAAAATGGTTTCTTGGTTGGTCTCTTGGTGTTTCTCTGCTTAAACCTTAGCTCTGCCAATCGAGTTCTCAAAGACAACAATGCTGAGAATGAATCAATAAGTAACA
GTGTACCTTCTGAGCAAGATGATCAACTTCTTCACAATTTCAGCCAAGTTGAGCTAAATAGCAAAGTATCGAAAGGTAGCATACCGGAGTTTAGTTCCATTGGTCCAATG
AATGGCGATTGCTGCAACTACGGCCACCATTGTGGAGGATATGTGTGTCCTCCGGACTACAGTTGTGGTGGAAACTCTGGTTGTCCATCCTATTACACTTGTATGCCGTG
TCAATGGCAGGGATGCCAAGGATGTCAAGGATGTCAAGGATGCCAGGGATGCCAGATATCACCTCCCTGTGGCTGCGAAGTCGGCGCCATCGAGAACTCTAAGGTCCAAG
AATCTATTCAAATTGCTGAACCTGATCCACCTAGAATCGTTCCACCAGTCCATCCAGCAAATCATAACATAAAATCCAGTGGGGGAGCAAATCAGGACATGAAATCCATT
GGCGGTCCGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGCCTCCGGACTCTTAGGCCAAACCAATGCCAATGCTTTTGTTGCTTTTAAAAGTACTCAACTTCCTCCTGAAAAGAGAGATCAAAGTTTCATGAAAATGTCTGT
TACAAAAAATGGTTTCTTGGTTGGTCTCTTGGTGTTTCTCTGCTTAAACCTTAGCTCTGCCAATCGAGTTCTCAAAGACAACAATGCTGAGAATGAATCAATAAGTAACA
GTGTACCTTCTGAGCAAGATGATCAACTTCTTCACAATTTCAGCCAAGTTGAGCTAAATAGCAAAGTATCGAAAGGTAGCATACCGGAGTTTAGTTCCATTGGTCCAATG
AATGGCGATTGCTGCAACTACGGCCACCATTGTGGAGGATATGTGTGTCCTCCGGACTACAGTTGTGGTGGAAACTCTGGTTGTCCATCCTATTACACTTGTATGCCGTG
TCAATGGCAGGGATGCCAAGGATGTCAAGGATGTCAAGGATGCCAGGGATGCCAGATATCACCTCCCTGTGGCTGCGAAGTCGGCGCCATCGAGAACTCTAAGGTCCAAG
AATCTATTCAAATTGCTGAACCTGATCCACCTAGAATCGTTCCACCAGTCCATCCAGCAAATCATAACATAAAATCCAGTGGGGGAGCAAATCAGGACATGAAATCCATT
GGCGGTCCGGTTTAG
Protein sequenceShow/hide protein sequence
MMASGLLGQTNANAFVAFKSTQLPPEKRDQSFMKMSVTKNGFLVGLLVFLCLNLSSANRVLKDNNAENESISNSVPSEQDDQLLHNFSQVELNSKVSKGSIPEFSSIGPM
NGDCCNYGHHCGGYVCPPDYSCGGNSGCPSYYTCMPCQWQGCQGCQGCQGCQGCQISPPCGCEVGAIENSKVQESIQIAEPDPPRIVPPVHPANHNIKSSGGANQDMKSI
GGPV