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Tan0000455 (gene) of Snake gourd v1 genome

Gene IDTan0000455
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPhycobilisome rod-core linker polypeptide CpcG2 like
Genome locationLG08:73418029..73420808
RNA-Seq ExpressionTan0000455
SyntenyTan0000455
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]2.3e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR FQRFAVRTSKQIEDIS +AAQKKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
XP_022949523.1 uncharacterized protein LOC111452848 [Cucurbita moschata]4.6e-2692.96Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR+FQRFAVRTSKQIEDIST+AAQKKQELA+Q+KDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]6.7e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR FQRFAVRTSKQIEDIS +AA+KKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
XP_023527736.1 uncharacterized protein LOC111790863 [Cucurbita pepo subsp. pepo]2.3e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE++VNSLANSRTFQRFAVRTSKQIEDIS +A+QKKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
XP_038903248.1 uncharacterized protein LOC120089892 [Benincasa hispida]1.8e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSRTFQRFAVRTSKQIE+IS +AAQKKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
TrEMBL top hitse value%identityAlignment
A0A6J1CWK8 uncharacterized protein LOC1110149591.2e-2490.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNF++RVVSYLVNELLV+SLANSR+FQRFAVRTSKQIEDIS +AAQKKQELA+QVKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
A0A6J1F5E7 uncharacterized protein LOC1114424701.1e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR FQRFAVRTSKQIEDIS +AAQKKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
A0A6J1GCB5 uncharacterized protein LOC1114528482.2e-2692.96Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR+FQRFAVRTSKQIEDIST+AAQKKQELA+Q+KDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
A0A6J1I5H8 uncharacterized protein LOC1114701022.2e-2692.96Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR+FQRFAVRTSKQIEDIST+AAQKKQELA+Q+KDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
A0A6J1IZW4 uncharacterized protein LOC1114821823.2e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LVNSLANSR FQRFAVRTSKQIEDIS +AA+KKQELA+QVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein3.9e-1555.22Show/hide
Query:  GGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFK
        GGNF+ RV+SY+ NE +VN LANS  FQRFAVRTSK+IE++S  AA+ ++++A Q+++ +KN +S K
Subjt:  GGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGCTTCTCGTCAACAGTCTTGCGAACAGCCGTACATTTCAAAGGTTTGCTGTTAGGACATC
AAAGCAAATCGAGGATATATCTACCAGGGCTGCACAGAAGAAGCAAGAACTTGCAGATCAGGTGAAAGATCTCTCCAAAAATTTCGAGTCTTTCAAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
TCTAGTTCTTTTACAATCAACGCAGATTATAAATGAGACTGCGAGAAGTTCGGCTGCGGCGTACAGAGTTTGCTCAGTTTGGGGCTTGCGTTCGAAGAAAATTAGGGCTT
CAAACCATTATCATCGCGACGATATTATTCAGGCATACGCATCAAGTAGGTATCCGAATCGCTGTTGATTTATTTTAATACGTGGAAGCGAGCATGGCGGGTGGAAATTT
CATGCACAGAGTAGTTTCTTACCTCGTGAATGAGCTTCTCGTCAACAGTCTTGCGAACAGCCGTACATTTCAAAGGTTTGCTGTTAGGACATCAAAGCAAATCGAGGATA
TATCTACCAGGGCTGCACAGAAGAAGCAAGAACTTGCAGATCAGGTGAAAGATCTCTCCAAAAATTTCGAGTCTTTCAAGAACCAATAATGCAGAACAGGACGTGTTACT
GCAACATGATGTAAATCCTATTCCAAAATTCCAAATCCATTTTGCTCTCTTGTAGACATAATATTACAGCTTAACTTATAATAGTCGCAAAGTGTCTCAAAAATTGTTTG
CAGCCTTCTCTGGCTTTTCTGTGTGTTGAATAATTGTGACGGTAGATTTTGATCTGTACTTCTACTTGAATCCTGTTCATCGGTGCCTGTGTTTGAAGCCAGGATATGAC
CATTTGCCTTTGACGTGTATGCACTTGCATGCTTCTGTAACTTGTTATCTTTGCTCCATTAACACAATTGGATTGGATCAGATTTTTAAACGCCA
Protein sequenceShow/hide protein sequence
MAGGNFMHRVVSYLVNELLVNSLANSRTFQRFAVRTSKQIEDISTRAAQKKQELADQVKDLSKNFESFKNQ