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Tan0000460 (gene) of Snake gourd v1 genome

Gene IDTan0000460
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUBN2 domain-containing protein
Genome locationLG03:27994588..27995085
RNA-Seq ExpressionTan0000460
SyntenyTan0000460
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]2.0e-6479.01Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        +KIVN  +VPKLENE+DE D+KK  LNA AINC YCALS DEFNR+ MCSSA EIW  LEVTHEGTNQVKE+KISMLVHNYELFK++ NE I +MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
        NI N LK LGKVY+ SENVRKILRSLPK WEAKVTAI+EAKDLTKL L+EL+GSLMTHEITM
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

XP_022971787.1 uncharacterized protein LOC111470465, partial [Cucurbita maxima]2.0e-6479.01Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        +KIVN  +VPKLENE+DE D+KK  LNA AINC YCALS DEFNR+ MCSSA EIW  LEVTHEGTNQVKE+KISMLVHNYELFK++ NE I +MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
        NI N LK LGKVY+ SENVRKILRSLPK WEAKVTAI+EAKDLTKL L+EL+GSLMTHEITM
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]1.8e-6882.82Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        MK V+  D PKLE EYDE ++KK   NA+AINC YCALSKDEFNRISMCSSA+EIWN LE+THEGTNQVKESKISM VHNYELFK+DANE+IT+MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK
        NI N LKGLGKVYT SENVRKILRSLPK WEAKVTAI+EAKDLTKL LEELIGSLMTHEI MK
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.8e-6882.82Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        MK V+  D PKLE EYDE ++KK   NA+AINC YCALSKDEFNRISMCSSA+EIWN LE+THEGTNQVKESKISM VHNYELFK+DANE+IT+MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK
        NI N LKGLGKVYT SENVRKILRSLPK WEAKVTAI+EAKDLTKL LEELIGSLMTHEI MK
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]4.3e-5972.22Show/hide
Query:  KIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTN
        KIV+  D+PK E + ++ D KK  +NA+A+NC +C L  +EFN+IS C+SAKEIW++L+VTHEGTNQVKESKISMLVHNY+LFK+DANE+I+EMFTRFTN
Subjt:  KIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTN

Query:  ITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK
        I N LKGLGK YT SENVRKILRSLPK WEAKVT I+EAKDL+KL LEEL+GSLM HEI MK
Subjt:  ITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK

TrEMBL top hitse value%identityAlignment
A0A1Q3BTP4 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein4.4e-4965.58Show/hide
Query:  PKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNITNTLKGL
        PK ENEY++ D +   LN++A +  +C +  +EFNRIS C SAKE+W++LEVT+EGTNQVKESKISMLVH YELF +  +E I++MFTRFT ITN+LK L
Subjt:  PKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNITNTLKGL

Query:  GKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK
        GK Y+N E VRKILR LPK W  KVTAIEEAKDL+ LHLE  +GSLMTHE TMK
Subjt:  GKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMK

A0A1Q3C832 DUF4219 domain-containing protein/UBN2 domain-containing protein3.4e-4966.25Show/hide
Query:  IVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNI
        IV+   VPKL+NEY   D K   LNARA++ FYCAL  +EFNRI  C SAKEIW+ LE THEGTNQVK+S+I ML+H YELF++   ESI  MF R+TNI
Subjt:  IVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNI

Query:  TNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
         N+L  LGK ++N+E VRKILRSLPK W+ KVTAIEEAKDLTKL LE+L+GSL+THEITM
Subjt:  TNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

A0A1Q3CYA8 DUF4219 domain-containing protein/UBN2 domain-containing protein4.4e-4965.62Show/hide
Query:  IVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNI
        IV+   VPKL+NEY   D K   LNARA++ FYCAL  +EFNRI  C SAKEIW+ LE THEGTNQVK+S+I ML+H YELF++   ESI  MF RFTNI
Subjt:  IVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNI

Query:  TNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
         N+L  LGK ++N+E VRKILRSLPK W+ KVTAIEEAKDLTKL LE+L+GSL+THE+ M
Subjt:  TNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

A0A6J1F0H1 uncharacterized protein LOC1114380999.7e-6579.01Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        +KIVN  +VPKLENE+DE D+KK  LNA AINC YCALS DEFNR+ MCSSA EIW  LEVTHEGTNQVKE+KISMLVHNYELFK++ NE I +MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
        NI N LK LGKVY+ SENVRKILRSLPK WEAKVTAI+EAKDLTKL L+EL+GSLMTHEITM
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

A0A6J1I2X4 uncharacterized protein LOC1114704659.7e-6579.01Show/hide
Query:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT
        +KIVN  +VPKLENE+DE D+KK  LNA AINC YCALS DEFNR+ MCSSA EIW  LEVTHEGTNQVKE+KISMLVHNYELFK++ NE I +MFTRFT
Subjt:  MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFT

Query:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM
        NI N LK LGKVY+ SENVRKILRSLPK WEAKVTAI+EAKDLTKL L+EL+GSLMTHEITM
Subjt:  NITNTLKGLGKVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGTTAATGAAAATGATGTGCCAAAATTAGAAAATGAATATGATGAAATTGATTTGAAAAAGCGTGGTCTTAATGCTAGAGCTATAAATTGTTTTTATTGTGC
TTTGAGTAAGGATGAATTTAATAGGATTTCTATGTGCTCTTCGGCTAAAGAAATATGGAATATTCTTGAAGTGACTCATGAGGGAACTAATCAAGTTAAAGAATCAAAAA
TTAGCATGCTAGTTCATAATTATGAATTGTTTAAGTTGGATGCTAATGAATCTATTACCGAGATGTTTACTAGATTTACTAACATTACAAATACTTTGAAAGGTCTTGGT
AAAGTTTATACTAACTCGGAAAATGTTAGAAAAATTCTTAGATCTCTACCTAAGATTTGGGAAGCTAAGGTGACGGCAATTGAAGAAGCAAAGGATCTCACCAAACTTCA
TTTGGAGGAACTTATTGGCTCTCTCATGACACATGAGATCACTATGAAGGTGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGTTAATGAAAATGATGTGCCAAAATTAGAAAATGAATATGATGAAATTGATTTGAAAAAGCGTGGTCTTAATGCTAGAGCTATAAATTGTTTTTATTGTGC
TTTGAGTAAGGATGAATTTAATAGGATTTCTATGTGCTCTTCGGCTAAAGAAATATGGAATATTCTTGAAGTGACTCATGAGGGAACTAATCAAGTTAAAGAATCAAAAA
TTAGCATGCTAGTTCATAATTATGAATTGTTTAAGTTGGATGCTAATGAATCTATTACCGAGATGTTTACTAGATTTACTAACATTACAAATACTTTGAAAGGTCTTGGT
AAAGTTTATACTAACTCGGAAAATGTTAGAAAAATTCTTAGATCTCTACCTAAGATTTGGGAAGCTAAGGTGACGGCAATTGAAGAAGCAAAGGATCTCACCAAACTTCA
TTTGGAGGAACTTATTGGCTCTCTCATGACACATGAGATCACTATGAAGGTGTTATAG
Protein sequenceShow/hide protein sequence
MKIVNENDVPKLENEYDEIDLKKRGLNARAINCFYCALSKDEFNRISMCSSAKEIWNILEVTHEGTNQVKESKISMLVHNYELFKLDANESITEMFTRFTNITNTLKGLG
KVYTNSENVRKILRSLPKIWEAKVTAIEEAKDLTKLHLEELIGSLMTHEITMKVL