; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000488 (gene) of Snake gourd v1 genome

Gene IDTan0000488
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:27572691..27573101
RNA-Seq ExpressionTan0000488
SyntenyTan0000488
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]9.5e-3655.47Show/hide
Query:  MDSSSTLALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ L+L +SL+  +E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]1.0e-3455.73Show/hide
Query:  LALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ L+L +SL+  +E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]4.4e-3355.12Show/hide
Query:  VLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + L+L +SL+  +E IS   ETTV  +N++ GP+L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]5.7e-3356.67Show/hide
Query:  SLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRD
        S +G  E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  
Subjt:  SLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRD

Query:  GPCLLHPKDTGTYNVCFPWN
        GPCL H + + T   CFPWN
Subjt:  GPCLLHPKDTGTYNVCFPWN

KAF8111848.1 hypothetical protein N665_0072s0059 [Sinapis alba]1.6e-2244.44Show/hide
Query:  MDSSSTLALSVLLMLFMSLNGFEESISYAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFH
        M +S  L ++ L+M+       E    + ETTVT  N L GP+L+VHC+SKD+DLGVH++     Y FTF+ N+W +TLF CSF W       F I+D  
Subjt:  MDSSSTLALSVLLMLFMSLNGFEESISYAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFH

Query:  RDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPW
        RDA+ C  C W I  DGPC L  K       CFPW
Subjt:  RDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPW

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog2.8e-3356.67Show/hide
Query:  SLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRD
        S +G  E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  
Subjt:  SLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRD

Query:  GPCLLHPKDTGTYNVCFPWN
        GPCL H + + T   CFPWN
Subjt:  GPCLLHPKDTGTYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein1.3e-2247.1Show/hide
Query:  MDSSSTLALSVLLMLFMSLNGFEESISYAE-TTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++   +L   + SI     TTV  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLLMLFMSLNGFEESISYAE-TTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

A0A5A7TXE8 S-protein homolog2.1e-3355.12Show/hide
Query:  VLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + L+L +SL+  +E IS   ETTV  +N++ GP+L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F817 S-protein homolog4.6e-3655.47Show/hide
Query:  MDSSSTLALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ L+L +SL+  +E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F818 S-protein homolog5.1e-3555.73Show/hide
Query:  LALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ L+L +SL+  +E IS   ETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFMSLNGFEESIS-YAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.7e-1641.67Show/hide
Query:  INKLVGPVLSV--HCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGT
        IN  +G  L++  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  
Subjt:  INKLVGPVLSV--HCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGT

Query:  YNVCFPWN
        +++C+PWN
Subjt:  YNVCFPWN

F4JZG1 S-protein homolog 43.0e-1642.24Show/hide
Query:  SYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCL
        S  ++ VT  N+L  G  L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC 
Subjt:  SYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCL

Query:  LHPKDTGTYNVCFPWN
            D   +N+C+ WN
Subjt:  LHPKDTGTYNVCFPWN

O23020 S-protein homolog 56.6e-2448.57Show/hide
Query:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 291.1e-1533.33Show/hide
Query:  MDSSSTLALSVLLMLFMSLNGFEESISYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M +SS + + + ++LF  ++       +A+T VT  N +     L++ CRSKD+DLG H+L    ++ + FRP+ + TTLF+C F+W       F  Y  
Subjt:  MDSSSTLALSVLLMLFMSLNGFEESISYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN
         RD   C  C W I  D  C+     +G +N     C+PWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN

Q9FMQ4 S-protein homolog 37.1e-1843Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.7e-2548.57Show/hide
Query:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family3.8e-1943.24Show/hide
Query:  TTVTTINKLVGPV-LSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHPKD
        TTV   N L G + L  HC+SK++DLG   +    ++SF FRP+V+G TLF C F+W +   H F IY   RD       C  C W+I +DGPC L+ K+
Subjt:  TTVTTINKLVGPV-LSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHPKD

Query:  TGTYNVCFPWN
        +  ++VC PWN
Subjt:  TGTYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family1.2e-1741.67Show/hide
Query:  INKLVGPVLSV--HCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGT
        IN  +G  L++  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  
Subjt:  INKLVGPVLSV--HCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGT

Query:  YNVCFPWN
        +++C+PWN
Subjt:  YNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family5.0e-1943Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

AT5G12070.1 Plant self-incompatibility protein S1 family2.1e-1742.24Show/hide
Query:  SYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCL
        S  ++ VT  N+L  G  L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC 
Subjt:  SYAETTVTTINKL-VGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCL

Query:  LHPKDTGTYNVCFPWN
            D   +N+C+ WN
Subjt:  LHPKDTGTYNVCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCATCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTATGAGTCTAAATGGTTTTGAAGAATCAATCTCATACGCGGAAACTACAGTGACAACGATTAA
TAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAATAAGCTACTCCTTTACCTTTAGACCCAATG
TTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGCAGA
TGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCATCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTATGAGTCTAAATGGTTTTGAAGAATCAATCTCATACGCGGAAACTACAGTGACAACGATTAA
TAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAATAAGCTACTCCTTTACCTTTAGACCCAATG
TTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGCAGA
TGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLLMLFMSLNGFEESISYAETTVTTINKLVGPVLSVHCRSKDNDLGVHVLDREISYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCR
WEIYRDGPCLLHPKDTGTYNVCFPWN