; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000544 (gene) of Snake gourd v1 genome

Gene IDTan0000544
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG06:40303757..40305276
RNA-Seq ExpressionTan0000544
SyntenyTan0000544
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026042.1 gag/pol protein [Cucumis melo var. makuwa]8.0e-10262.58Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + PEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSY FDQNVDEPCVYK+I  +KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ-----------HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------------------------------
        M DLGEAQ           HGVHLS+EQCPKTPQEVEDMR IPYAS+V                                                    
Subjt:  MKDLGEAQ-----------HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------------------------------

Query:  -----------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIV
                               AKEA+WLRKF  DLKVVPNM  PI+LYCDNSG VANSKEPRSHKRGKHI+RKY LIR IVQRGDV VTKIAS+HNIV
Subjt:  -----------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIV

Query:  DPFIKTLTAKVFEGHLESLGLRDMYI
        DPF KTLT KVFEGHLESLGLRDM+I
Subjt:  DPFIKTLTAKVFEGHLESLGLRDMYI

KAA0026154.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-10165.67Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + PEGFI QGQEQKVC LNR IYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYK+I   KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ----------------HGVHLSREQCPKTPQEVEDMRHIPYASAV--------------------------------------------AKE
        MKDLGEAQ                H VHLS+EQCPKTPQEVEDMR IPYAS +                                            AKE
Subjt:  MKDLGEAQ----------------HGVHLSREQCPKTPQEVEDMRHIPYASAV--------------------------------------------AKE

Query:  AIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI
        A+WLRKF  DL+VVPNM  PITLYCDNSG VANSKEP SHK+GKHIE KYYLIR I+QRGDV VTKI S+HNI D F KTLTAKVFEGHLESLGLRDMYI
Subjt:  AIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI

KAA0033228.1 gag/pol protein [Cucumis melo var. makuwa]3.7e-9961.03Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + P+GFI QGQEQKVC+LN SIYGLKQASRSWNIRFDTAIKSY FDQNVDEPCVYK+I   KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------
        MKDLGEAQ                  HGVHLS+EQCPK P EVEDMR IPYASAV                                             
Subjt:  MKDLGEAQ------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------

Query:  ----------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIAS
                                    AKE +WLRKF  DL+VVPNM  PITLYCDNSGAV NSKEPRSHKRGKHIERKY+LIR IVQR DV VTKIAS
Subjt:  ----------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIAS

Query:  KHNIVDPFIKTLTAKVFEGHLESLGLRDMYI
        K NIVDPF KTLTAKVFEGHLESLGLRDMYI
Subjt:  KHNIVDPFIKTLTAKVFEGHLESLGLRDMYI

KAA0046028.1 gag/pol protein [Cucumis melo var. makuwa]9.2e-9862.26Show/hide
Query:  SMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQM
        S+  + P+GFI QGQEQKVCKLN SIYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYK+I  +KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQM
Subjt:  SMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQM

Query:  KDLGEAQH-GVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------------------------
        KDL EAQ+ GVHLS+EQC KTPQEVEDMR IPYASAV                                                               
Subjt:  KDLGEAQH-GVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------------------------

Query:  ---------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLT
                       AKEAIWLRKF  DL+VVPNM   ITLYCDNSG V +SKEPRSHK+GKHIERKY+LIR IVQRGDV VTKIAS+HNI DPF KTLT
Subjt:  ---------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLT

Query:  AKVFEGHLESLGLRDMYI
        AKVF GHLESLGLRDMYI
Subjt:  AKVFEGHLESLGLRDMYI

TYK04889.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]7.1e-9862.96Show/hide
Query:  MDLEMESMDFN-----------------------------SPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVND
        MDLEMESM FN                              PEGFI QGQEQKVCKLNRSIYGLKQASR WNIRFDTAIKSYGFDQNVDEPCVYK+I   
Subjt:  MDLEMESMDFN-----------------------------SPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVND

Query:  KVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLGEAQ-HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------
        KVA LVLYVD+ILLI NDVGYLTD+K W+A QFQMKDLGEAQ HGVHLS+EQCPK PQEVEDMR IPYAS V                            
Subjt:  KVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLGEAQ-HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------

Query:  --------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKH
                                  AKEAIWLRKF  DL+VVPNM   ITLYCDNSGAVANSKEP SHKR KHIERKY+LIR IVQR D  VTKIAS+H
Subjt:  --------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKH

Query:  NIVDPFIKTLTAKVFEGHLESLGL
        NI +PF KTLTAKVFEGHLESLGL
Subjt:  NIVDPFIKTLTAKVFEGHLESLGL

TrEMBL top hitse value%identityAlignment
A0A5A7SKC5 Gag/pol protein4.3e-10165.67Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + PEGFI QGQEQKVC LNR IYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYK+I   KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ----------------HGVHLSREQCPKTPQEVEDMRHIPYASAV--------------------------------------------AKE
        MKDLGEAQ                H VHLS+EQCPKTPQEVEDMR IPYAS +                                            AKE
Subjt:  MKDLGEAQ----------------HGVHLSREQCPKTPQEVEDMRHIPYASAV--------------------------------------------AKE

Query:  AIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI
        A+WLRKF  DL+VVPNM  PITLYCDNSG VANSKEP SHK+GKHIE KYYLIR I+QRGDV VTKI S+HNI D F KTLTAKVFEGHLESLGLRDMYI
Subjt:  AIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI

A0A5A7SLM0 Gag/pol protein3.9e-10262.58Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + PEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSY FDQNVDEPCVYK+I  +KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ-----------HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------------------------------
        M DLGEAQ           HGVHLS+EQCPKTPQEVEDMR IPYAS+V                                                    
Subjt:  MKDLGEAQ-----------HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------------------------------

Query:  -----------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIV
                               AKEA+WLRKF  DLKVVPNM  PI+LYCDNSG VANSKEPRSHKRGKHI+RKY LIR IVQRGDV VTKIAS+HNIV
Subjt:  -----------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIV

Query:  DPFIKTLTAKVFEGHLESLGLRDMYI
        DPF KTLT KVFEGHLESLGLRDM+I
Subjt:  DPFIKTLTAKVFEGHLESLGLRDMYI

A0A5A7SRR6 Gag/pol protein1.8e-9961.03Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + P+GFI QGQEQKVC+LN SIYGLKQASRSWNIRFDTAIKSY FDQNVDEPCVYK+I   KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------
        MKDLGEAQ                  HGVHLS+EQCPK P EVEDMR IPYASAV                                             
Subjt:  MKDLGEAQ------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV---------------------------------------------

Query:  ----------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIAS
                                    AKE +WLRKF  DL+VVPNM  PITLYCDNSGAV NSKEPRSHKRGKHIERKY+LIR IVQR DV VTKIAS
Subjt:  ----------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIAS

Query:  KHNIVDPFIKTLTAKVFEGHLESLGLRDMYI
        K NIVDPF KTLTAKVFEGHLESLGLRDMYI
Subjt:  KHNIVDPFIKTLTAKVFEGHLESLGLRDMYI

A0A5A7TZD0 Gag/pol protein5.5e-9652.38Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        ES+  + PEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYK+I   KVA LVLYVD+ILLIGNDVGYLTD+K W+A QFQ
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQ--------------------------------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV-------------------
        MKDLGEAQ                                            HGVHLS+EQ PKTPQEVEDMR IPYASAV                   
Subjt:  MKDLGEAQ--------------------------------------------HGVHLSREQCPKTPQEVEDMRHIPYASAV-------------------

Query:  ------------------------------------------------------------------------------------------------AKEA
                                                                                                        AKEA
Subjt:  ------------------------------------------------------------------------------------------------AKEA

Query:  IWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI
        +WLRKF  DL+VVPNM  PITLYCDNSGAVANSKEPRSHKRGKHIERKY+LIR IVQRGDV VTKIAS+HNI DPF KTLTAKVFEGHLESLGLRDMYI
Subjt:  IWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGLRDMYI

A0A5D3C3C9 Retrovirus-related pol polyprotein from transposon tnt 1-943.4e-9862.96Show/hide
Query:  MDLEMESMDFN-----------------------------SPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVND
        MDLEMESM FN                              PEGFI QGQEQKVCKLNRSIYGLKQASR WNIRFDTAIKSYGFDQNVDEPCVYK+I   
Subjt:  MDLEMESMDFN-----------------------------SPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVND

Query:  KVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLGEAQ-HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------
        KVA LVLYVD+ILLI NDVGYLTD+K W+A QFQMKDLGEAQ HGVHLS+EQCPK PQEVEDMR IPYAS V                            
Subjt:  KVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLGEAQ-HGVHLSREQCPKTPQEVEDMRHIPYASAV----------------------------

Query:  --------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKH
                                  AKEAIWLRKF  DL+VVPNM   ITLYCDNSGAVANSKEP SHKR KHIERKY+LIR IVQR D  VTKIAS+H
Subjt:  --------------------------AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKH

Query:  NIVDPFIKTLTAKVFEGHLESLGL
        NI +PF KTLTAKVFEGHLESLGL
Subjt:  NIVDPFIKTLTAKVFEGHLESLGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-1132.77Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY---KRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMAT
        E +    P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K  +N+ + +L LYVD++++   D+  + + K ++  
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY---KRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMAT

Query:  QFQMKDLGEAQHGVHLSRE
        +F+M DL E +H + +  E
Subjt:  QFQMKDLGEAQHGVHLSRE

P04146 Copia protein1.5e-1035.05Show/hide
Query:  KEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGL
        +EA+WL+   T + +   +E+PI +Y DN G ++ +  P  HKR KHI+ KY+  R  VQ   + +  I +++ + D F K L A  F    + LGL
Subjt:  KEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-2423.81Show/hide
Query:  DLEMESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWM
        DLE E +    PEGF   G++  VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR   +   +L+LYVD++L++G D G +  +K  +
Subjt:  DLEMESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWM

Query:  ATQFQMKDLGEAQH--------------------------------------------GVHLSREQCPKTPQEVEDMRHIPYASAV--------------
        +  F MKDLG AQ                                              + LS++ CP T +E  +M  +PY+SAV              
Subjt:  ATQFQMKDLGEAQH--------------------------------------------GVHLSREQCPKTPQEVEDMRHIPYASAV--------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGL
          KE IWL++F  +L +    +    +YCD+  A+  SK    H R KHI+ +Y+ IR +V    + V KI++  N  D   K +    FE   E +G+
Subjt:  -AKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVDPFIKTLTAKVFEGHLESLGL

P25600 Putative transposon Ty5-1 protein YCL074W2.0e-0728.21Show/hide
Query:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ
        E +    P GF+ +     V +L   +YGLKQA   WN   +  +K  GF ++  E  +Y R  +D    + +YVD++L+          +K  +   + 
Subjt:  ESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQ

Query:  MKDLGEAQHGVHLSREQ
        MKDLG+    + L+  Q
Subjt:  MKDLGEAQHGVHLSREQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.2e-1128.95Show/hide
Query:  NSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLG
        + P GFI + +   VCKL +++YGLKQA R+W +     + + GF  +V +  ++       +  +++YVD+IL+ GND   L +  + ++ +F +KD  
Subjt:  NSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLG

Query:  EAQHGVHLSREQCP
        E  + + +  ++ P
Subjt:  EAQHGVHLSREQCP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-1026.09Show/hide
Query:  NSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLG
        + P GF+ + +   VC+L ++IYGLKQA R+W +   T + + GF  ++ +  ++       +  +++YVD+IL+ GND   L    + ++ +F +K+  
Subjt:  NSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLG

Query:  EAQHGVHLSREQCPK
        +  + + +  ++ P+
Subjt:  EAQHGVHLSREQCPK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.2e-1230.58Show/hide
Query:  ESMDFNSPEGFIA-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMA
        E +    P G+ A QG       VC L +SIYGLKQASR W ++F   +  +GF Q+  +   + +I       +++YVD+I++  N+   + ++K+ + 
Subjt:  ESMDFNSPEGFIA-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMA

Query:  TQFQMKDLGEAQH--GVHLSR
        + F+++DLG  ++  G+ ++R
Subjt:  TQFQMKDLGEAQH--GVHLSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTTGAAATGGAGTCAATGGACTTCAATTCGCCCGAAGGGTTCATAGCCCAAGGTCAGGAGCAAAAAGTTTGCAAGCTTAATCGATCAATTTATGGATTGAAACA
AGCGTCAAGATCTTGGAATATAAGATTTGATACTGCGATCAAGTCTTATGGCTTTGACCAAAACGTTGATGAGCCTTGTGTTTACAAGAGGATCGTCAACGACAAAGTAG
CTTTGTTAGTACTTTATGTGGATAATATCCTACTCATTGGGAATGATGTAGGATACCTAACTGACATAAAGAATTGGATGGCGACCCAATTCCAAATGAAAGATTTGGGA
GAGGCGCAGCACGGAGTTCATCTGTCTAGGGAACAGTGTCCCAAGACACCTCAAGAAGTTGAAGATATGAGACATATTCCCTATGCCTCTGCAGTAGCTAAAGAGGCTAT
TTGGCTAAGGAAATTCTTTACTGATTTGAAAGTTGTTCCAAATATGGAATCTCCCATCACCTTATACTGTGACAACAGTGGTGCGGTAGCCAATTCGAAGGAACCTCGCA
GCCATAAGCGAGGAAAGCACATCGAGAGAAAGTATTACTTGATACGAGGAATAGTGCAACGAGGAGATGTGACAGTCACGAAGATCGCTTCGAAGCACAATATTGTTGAT
CCGTTTATAAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTGGAAAGTTTGGGTCTACGAGATATGTACATAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTTGAAATGGAGTCAATGGACTTCAATTCGCCCGAAGGGTTCATAGCCCAAGGTCAGGAGCAAAAAGTTTGCAAGCTTAATCGATCAATTTATGGATTGAAACA
AGCGTCAAGATCTTGGAATATAAGATTTGATACTGCGATCAAGTCTTATGGCTTTGACCAAAACGTTGATGAGCCTTGTGTTTACAAGAGGATCGTCAACGACAAAGTAG
CTTTGTTAGTACTTTATGTGGATAATATCCTACTCATTGGGAATGATGTAGGATACCTAACTGACATAAAGAATTGGATGGCGACCCAATTCCAAATGAAAGATTTGGGA
GAGGCGCAGCACGGAGTTCATCTGTCTAGGGAACAGTGTCCCAAGACACCTCAAGAAGTTGAAGATATGAGACATATTCCCTATGCCTCTGCAGTAGCTAAAGAGGCTAT
TTGGCTAAGGAAATTCTTTACTGATTTGAAAGTTGTTCCAAATATGGAATCTCCCATCACCTTATACTGTGACAACAGTGGTGCGGTAGCCAATTCGAAGGAACCTCGCA
GCCATAAGCGAGGAAAGCACATCGAGAGAAAGTATTACTTGATACGAGGAATAGTGCAACGAGGAGATGTGACAGTCACGAAGATCGCTTCGAAGCACAATATTGTTGAT
CCGTTTATAAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTGGAAAGTTTGGGTCTACGAGATATGTACATAAGCTAA
Protein sequenceShow/hide protein sequence
MDLEMESMDFNSPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKRIVNDKVALLVLYVDNILLIGNDVGYLTDIKNWMATQFQMKDLG
EAQHGVHLSREQCPKTPQEVEDMRHIPYASAVAKEAIWLRKFFTDLKVVPNMESPITLYCDNSGAVANSKEPRSHKRGKHIERKYYLIRGIVQRGDVTVTKIASKHNIVD
PFIKTLTAKVFEGHLESLGLRDMYIS