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Tan0000579 (gene) of Snake gourd v1 genome

Gene IDTan0000579
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein BIC1-like
Genome locationLG08:68999669..69000689
RNA-Seq ExpressionTan0000579
SyntenyTan0000579
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028105.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-4870.37Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        MESH   SFL       PPPPLTAEKAP+  EKIGIEQEL+ L S     KRSESEVQ       EVA  +EMQ  TT+ A    E  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        REMAGRVWIP+IWGQEELLK+WIDCS FDACLFPTGI  ARAALVEEGRRANNGGFR+ENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

XP_022927272.1 protein BIC1-like [Cucurbita moschata]1.5e-4870.99Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        MESH   SFL       PPPPLTAEKAP+  EKIGIEQEL+ L S     KRSESEVQ       EVA  +EMQ  TT+ A    E  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        REMAGRVWIP+IWGQEELLK+WIDCS FDACLFPTGI  ARAALVEEGRRANNGGFRLENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

XP_022983147.1 protein BIC1-like [Cucurbita maxima]1.5e-5168.52Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        M+  GAGS LH+YS+S PPPP          +  GIEQEL+CLVSSFGGGKRSES+V+EDDG  +EV   E             +E  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        RE+AGRVWIPEIWGQEELLKDWIDC AFDACLFPTGI SARAAL+EEGRRANNGGFR ENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

XP_023528325.1 protein BIC1-like [Cucurbita pepo subsp. pepo]3.6e-5067.9Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        M+  GAGS LH+YS+S PPPP             GIEQEL+CLVSSF GGKRSES+V+EDDG  +EV             A   AE  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
         E+AGRVWIPEIWGQEELLKDWIDC AFDACLFPTGI SARAAL+EEGRRANNGGFR ENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

XP_038903496.1 protein BIC1 [Benincasa hispida]6.1e-5070.06Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGG----KRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEED-GRER
        M+ HGAGS LH+Y   +PPPP  A KAP A +K GIEQEL  LVS   GG    KR ES+VQE+DGA MEVA          + AVT  +  EE+ GRER
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGG----KRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEED-GRER

Query:  LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGI SARAALVEEGRRANNGG  LENRC
Subjt:  LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

TrEMBL top hitse value%identityAlignment
A0A5A7TR64 Protein BIC1-like1.8e-4768.26Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFG----GGKRSESEVQEDDGALMEV-ATVEEMQEPTTSEAVTTAEVVEEDGRER
        M+ H  GS LH+Y  S+PPPP  A +AP   +K G EQEL  LV+S G    G K  ES+VQEDDGA MEV ATV E +E    E        EE GRER
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFG----GGKRSESEVQEDDGALMEV-ATVEEMQEPTTSEAVTTAEVVEEDGRER

Query:  LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGI SARAALVEE RRANNGG  LENRC
Subjt:  LKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

A0A6J1EGP6 protein BIC1-like7.3e-4970.99Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        MESH   SFL       PPPPLTAEKAP+  EKIGIEQEL+ L S     KRSESEVQ       EVA  +EMQ  TT+ A    E  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        REMAGRVWIP+IWGQEELLK+WIDCS FDACLFPTGI  ARAALVEEGRRANNGGFRLENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

A0A6J1F7F9 protein BIC1-like3.6e-4866.67Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        M+  GAGS L +YS+S PPP              GIEQEL+CLVSSFGGGKRSES+V+EDDG  +EV      +E             EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        RE+AGRVWIPEIWGQEELLKDWIDC AFDACLFPTGI SARAAL+EEGRRANNGGFR ENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

A0A6J1IYG7 protein BIC1-like7.1e-5268.52Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR
        M+  GAGS LH+YS+S PPPP          +  GIEQEL+CLVSSFGGGKRSES+V+EDDG  +EV   E             +E  EE GRERLKRHR
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHR

Query:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        RE+AGRVWIPEIWGQEELLKDWIDC AFDACLFPTGI SARAAL+EEGRRANNGGFR ENRC
Subjt:  REMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

A0A6J1KWF3 protein BIC1-like2.1e-4869.33Show/hide
Query:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQ-EPTTSEAVTTAEVVEEDGRERLKRH
        MESH   SFL       PPPPLTA+KAP+  EKIGIEQEL+ L S     KRSESEVQ       EVA  +EMQ + TT+ A    E  EE GRERLKRH
Subjt:  MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQ-EPTTSEAVTTAEVVEEDGRERLKRH

Query:  RREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        RREM GRVWIP+IWGQEELLK+WIDCS FDACLFPTGI  ARAALVEEGRRANNGGFRLENRC
Subjt:  RREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC12.9e-2675.34Show/hide
Query:  EDGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        + GRERLK+HRRE+AGRVWIPEIWGQEELLKDWIDCS FD CL P GI SAR ALVEE RRA +    L NRC
Subjt:  EDGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC

Q9M280 Protein BIC22.0e-1148.05Show/hide
Query:  GRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEE------GRRANNGGFRLENRC
        GR+RLKRHR E+AG+V IP+ WG+E LL  W+D S FDA    + IVSARAAL+ +       R +     R+E+ C
Subjt:  GRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEE------GRRANNGGFRLENRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein1.4e-1248.05Show/hide
Query:  GRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEE------GRRANNGGFRLENRC
        GR+RLKRHR E+AG+V IP+ WG+E LL  W+D S FDA    + IVSARAAL+ +       R +     R+E+ C
Subjt:  GRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEE------GRRANNGGFRLENRC

AT3G52740.1 unknown protein2.1e-2775.34Show/hide
Query:  EDGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC
        + GRERLK+HRRE+AGRVWIPEIWGQEELLKDWIDCS FD CL P GI SAR ALVEE RRA +    L NRC
Subjt:  EDGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCACGGCGCTGGTTCTTTTCTTCATCGATACTCTGTTTCCGTTCCTCCGCCGCCGTTGACGGCTGAGAAAGCTCCTTTGGCGGAAGAGAAAATCGGAATCGA
ACAGGAACTGCAATGTCTGGTTTCGAGTTTCGGCGGAGGAAAACGCTCGGAATCGGAAGTGCAGGAGGACGACGGAGCGCTAATGGAGGTCGCGACGGTGGAGGAAATGC
AAGAACCGACGACCTCCGAGGCGGTGACGACGGCGGAGGTGGTGGAGGAAGATGGACGGGAGAGACTGAAGAGGCACCGGCGGGAGATGGCCGGCAGAGTCTGGATACCG
GAGATATGGGGGCAAGAGGAGCTTCTGAAGGATTGGATTGATTGCTCCGCCTTCGACGCTTGTTTATTTCCGACTGGAATCGTGTCGGCGAGGGCAGCGCTGGTTGAAGA
AGGAAGGAGGGCCAACAATGGCGGATTCAGACTGGAGAACAGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCATTTCATTTTCCCTCAAATTCCCATATCCCAATCAAAACCAAAACCACAAATCTTTCCAACTACAAATCCGCGTCTCCAATTTCTCCATCTGGATTCTCTCTTTTT
CATTCTTTCATTTCGACTTCACTGTTCAATTCATCTCATTGATTCATTAATCGCCAAATTCATTTTTCATGGCCGACGGAGCTTTCGTCTAGGGTTTCGCTGCATGAGGA
GAGAGGTTTGACCTAGTTTGCGGAAGATGGAATCTCACGGCGCTGGTTCTTTTCTTCATCGATACTCTGTTTCCGTTCCTCCGCCGCCGTTGACGGCTGAGAAAGCTCCT
TTGGCGGAAGAGAAAATCGGAATCGAACAGGAACTGCAATGTCTGGTTTCGAGTTTCGGCGGAGGAAAACGCTCGGAATCGGAAGTGCAGGAGGACGACGGAGCGCTAAT
GGAGGTCGCGACGGTGGAGGAAATGCAAGAACCGACGACCTCCGAGGCGGTGACGACGGCGGAGGTGGTGGAGGAAGATGGACGGGAGAGACTGAAGAGGCACCGGCGGG
AGATGGCCGGCAGAGTCTGGATACCGGAGATATGGGGGCAAGAGGAGCTTCTGAAGGATTGGATTGATTGCTCCGCCTTCGACGCTTGTTTATTTCCGACTGGAATCGTG
TCGGCGAGGGCAGCGCTGGTTGAAGAAGGAAGGAGGGCCAACAATGGCGGATTCAGACTGGAGAACAGGTGCTGATTTTTCAGATAATTATTTTAGGGTGGGATAAATTA
ATCGCAATAAAAAAAGAAAAAAAAAACAAAGAAATCCTTTTCCCATGCTCTGAAATTAGTTTCCAACATCTGGGGGAGAGGATTTTGAATGGAAACAATTAAACAAAATA
ATGCTTCTTTTTTTTTTTTTTTTTGTCTATGGCTTTTCTTTCATTGGCCATTTGATTTTCCATTATTGTTAATTAATACAATTATGAATTCTCCATGCTACTTTTGATAC
TATTATTGTTGGTTATTATTATTTCGATTAA
Protein sequenceShow/hide protein sequence
MESHGAGSFLHRYSVSVPPPPLTAEKAPLAEEKIGIEQELQCLVSSFGGGKRSESEVQEDDGALMEVATVEEMQEPTTSEAVTTAEVVEEDGRERLKRHRREMAGRVWIP
EIWGQEELLKDWIDCSAFDACLFPTGIVSARAALVEEGRRANNGGFRLENRC