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Tan0000594 (gene) of Snake gourd v1 genome

Gene IDTan0000594
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:64857135..64857386
RNA-Seq ExpressionTan0000594
SyntenyTan0000594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053873.1 hypothetical protein E6C27_scaffold135G002660 [Cucumis melo var. makuwa]1.7e-1156.98Show/hide
Query:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVE---VKEADQSKVSLSSMAIDKKVVRASTSMAFLPPLAYILKK
        MAGM  NFFPTDFYYPR   P+  QI+ KPL        +KTVE     E  +  +SLSS+AI+KK+V ASTSMAFLPP +YILK+
Subjt:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVE---VKEADQSKVSLSSMAIDKKVVRASTSMAFLPPLAYILKK

KAG6580888.1 hypothetical protein SDJN03_20890, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1054.65Show/hide
Query:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVEVKEADQS----KVSLSSMAIDKKVVRASTSMAFLPPLAYILK
        MAGMQYNFFPTDFYYPRPPPP     +   +L  +  P  +TVE ++ +QS    K S +SMA++K VV AS S AFLPP ++ILK
Subjt:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVEVKEADQS----KVSLSSMAIDKKVVRASTSMAFLPPLAYILK

WP_217833416.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.9e-0962.34Show/hide
Query:  PRPPPPNSVQISGKPLLPPVVPPPTKTVE-VKEADQS--------KVSLSSMAIDKKVVRASTSMAFLPPLAYILKK
        P P PPNSVQIS +PL   VVPPP KTVE  +EAD S         +  SSMAID KVV ASTSMAFLPP +YILK+
Subjt:  PRPPPPNSVQISGKPLLPPVVPPPTKTVE-VKEADQS--------KVSLSSMAIDKKVVRASTSMAFLPPLAYILKK

TrEMBL top hitse value%identityAlignment
A0A5A7UD60 Uncharacterized protein8.2e-1256.98Show/hide
Query:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVE---VKEADQSKVSLSSMAIDKKVVRASTSMAFLPPLAYILKK
        MAGM  NFFPTDFYYPR   P+  QI+ KPL        +KTVE     E  +  +SLSS+AI+KK+V ASTSMAFLPP +YILK+
Subjt:  MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVE---VKEADQSKVSLSSMAIDKKVVRASTSMAFLPPLAYILKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCGCCACCGCCTAATTCCGTTCAAATCTCCGGCAAGCCGCTCCTGCCTCCAGTTGTTCC
TCCGCCGACCAAAACAGTTGAAGTTAAAGAAGCCGACCAATCCAAAGTGTCGTTGTCGTCGATGGCCATCGACAAGAAGGTGGTTAGAGCTTCCACTTCAATGGCGTTTC
TGCCTCCTCTCGCTTACATCCTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCGCCACCGCCTAATTCCGTTCAAATCTCCGGCAAGCCGCTCCTGCCTCCAGTTGTTCC
TCCGCCGACCAAAACAGTTGAAGTTAAAGAAGCCGACCAATCCAAAGTGTCGTTGTCGTCGATGGCCATCGACAAGAAGGTGGTTAGAGCTTCCACTTCAATGGCGTTTC
TGCCTCCTCTCGCTTACATCCTCAAGAAATGA
Protein sequenceShow/hide protein sequence
MAGMQYNFFPTDFYYPRPPPPNSVQISGKPLLPPVVPPPTKTVEVKEADQSKVSLSSMAIDKKVVRASTSMAFLPPLAYILKK