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Tan0000622 (gene) of Snake gourd v1 genome

Gene IDTan0000622
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 9
Genome locationLG01:9303749..9304195
RNA-Seq ExpressionTan0000622
SyntenyTan0000622
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]3.8e-1452.87Show/hide
Query:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG
        M + K   L FIGIL V  DM++I NA  +I Y  +  GD+SPGC+  HPELC+    NPYQRGC+ IDRCR+G D  D+EE+ I+G
Subjt:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]5.7e-1848.37Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEK-------PIDGKENDITNG---
        KG ML FIGIL V   M+ I NA  YI+Y  LK D+SPGC+ KHP LCK  E N YQRGCSAI+RCR   D  DSEEK        ID  E+D   G   
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEK-------PIDGKENDITNG---

Query:  EQDIIKEDEEK-------DIIDREIEKIYKDDAQNDVKDSEENIVKDNTHKIN
          DI  +D+EK       D I+ + EK  K  A +D+KDSEE I ++N  K++
Subjt:  EQDIIKEDEEK-------DIIDREIEKIYKDDAQNDVKDSEENIVKDNTHKIN

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]2.0e-2350Show/hide
Query:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG-KENDITNGEQDII
        M I KG M  F+GIL  C+ M+ I NA  +I YDPL+GD+SPGC+  HPELCK    NPY+RGC++IDRCR G D  D  E  ++G  EN I + +  I+
Subjt:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG-KENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDAQNDVKDSEENIVKDN
        K D + D+I    EKI K DA+N+VKDS+E I++ +
Subjt:  KEDEEKDIIDREIEKIYKDDAQNDVKDSEENIVKDN

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]1.0e-1440.85Show/hide
Query:  MLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKENDITNGEQDIIKEDEEKD
        ML   G LF+CIDM+ I   NAN I Y+ ++ D+SPGCN KHP LC+  + NPY+RGC+AI++CR       +  + ID K NDI         E E K 
Subjt:  MLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKENDITNGEQDIIKEDEEKD

Query:  IIDREIEKIYKDDAQNDVKDSEENIVKDNTHKINPNVTKDIS
          D  + K+              + VKDNT KINP   ++IS
Subjt:  IIDREIEKIYKDDAQNDVKDSEENIVKDNTHKINPNVTKDIS

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]1.4e-1347.71Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKEND--ITNGEQDIIKED
        KG M+ FI +LFV I+M+ I NA +YI+YDPLK +    C+  HP+LCK    NPYQRGC+ IDRCR              G E+D  I N E+DI   D
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKEND--ITNGEQDIIKED

Query:  EEKDIIDRE
        EE DI+D +
Subjt:  EEKDIIDRE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein1.8e-1452.87Show/hide
Query:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG
        M + K   L FIGIL V  DM++I NA  +I Y  +  GD+SPGC+  HPELC+    NPYQRGC+ IDRCR+G D  D+EE+ I+G
Subjt:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG

A0A6J1C8U5 uncharacterized protein LOC1110084952.7e-1848.37Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEK-------PIDGKENDITNG---
        KG ML FIGIL V   M+ I NA  YI+Y  LK D+SPGC+ KHP LCK  E N YQRGCSAI+RCR   D  DSEEK        ID  E+D   G   
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEK-------PIDGKENDITNG---

Query:  EQDIIKEDEEK-------DIIDREIEKIYKDDAQNDVKDSEENIVKDNTHKIN
          DI  +D+EK       D I+ + EK  K  A +D+KDSEE I ++N  K++
Subjt:  EQDIIKEDEEK-------DIIDREIEKIYKDDAQNDVKDSEENIVKDNTHKIN

A0A6J1DYH7 uncharacterized protein LOC1110257779.7e-2450Show/hide
Query:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG-KENDITNGEQDII
        M I KG M  F+GIL  C+ M+ I NA  +I YDPL+GD+SPGC+  HPELCK    NPY+RGC++IDRCR G D  D  E  ++G  EN I + +  I+
Subjt:  MTIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDG-KENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDAQNDVKDSEENIVKDN
        K D + D+I    EKI K DA+N+VKDS+E I++ +
Subjt:  KEDEEKDIIDREIEKIYKDDAQNDVKDSEENIVKDN

A0A6J1FQ53 auxin-induced in root cultures protein 12-like4.8e-1540.85Show/hide
Query:  MLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKENDITNGEQDIIKEDEEKD
        ML   G LF+CIDM+ I   NAN I Y+ ++ D+SPGCN KHP LC+  + NPY+RGC+AI++CR       +  + ID K NDI         E E K 
Subjt:  MLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKENDITNGEQDIIKEDEEKD

Query:  IIDREIEKIYKDDAQNDVKDSEENIVKDNTHKINPNVTKDIS
          D  + K+              + VKDNT KINP   ++IS
Subjt:  IIDREIEKIYKDDAQNDVKDSEENIVKDNTHKINPNVTKDIS

A0A6J1HAJ8 protein RALF-like 97.0e-1447.71Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKEND--ITNGEQDIIKED
        KG M+ FI +LFV I+M+ I NA +YI+YDPLK +    C+  HP+LCK    NPYQRGC+ IDRCR              G E+D  I N E+DI   D
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKEND--ITNGEQDIIKED

Query:  EEKDIIDRE
        EE DI+D +
Subjt:  EEKDIIDRE

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 67.5e-0535.82Show/hide
Query:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        S I I FV + +++ +         YI+Y+ +KGDI PGC++K+P+ C +     Y RGC    RC+
Subjt:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

A8MQM7 Protein RALF-like 152.6e-0539.06Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        ++S   ILF+ +    +    YISY  +  GD +  C+  HP  CK+   NPY+RGC  I+RCR
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

A8MRM1 Protein RALF-like 164.8e-0434.48Show/hide
Query:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGFDATDSEEKPIDGKENDITN
        I+F+   M++++        A  + Y  +KGD  P C  K+P  C +  VN Y RGC  I RC RD    T+S    +D  E+ I N
Subjt:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGFDATDSEEKPIDGKENDITN

Q3ECL0 Protein RALF-like 96.1e-0739.39Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG
        +LS   ++F+ +    +    YI+Y  + +GD +  C+  HP  CK+ E NPYQRGC  I+RCR G
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 65.3e-0635.82Show/hide
Query:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        S I I FV + +++ +         YI+Y+ +KGDI PGC++K+P+ C +     Y RGC    RC+
Subjt:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

AT1G61563.1 ralf-like 81.3e-0432.81Show/hide
Query:  MLSFIGILFVCI-DMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC
        +LS   ++F+ +    V  +  YI+Y  + +GD +  C+  HP  CK+ + NPY+RGC  ++ C
Subjt:  MLSFIGILFVCI-DMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC

AT1G61566.1 ralf-like 94.3e-0839.39Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG
        +LS   ++F+ +    +    YI+Y  + +GD +  C+  HP  CK+ E NPYQRGC  I+RCR G
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG

AT2G22055.1 RALF-like 151.8e-0639.06Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        ++S   ILF+ +    +    YISY  +  GD +  C+  HP  CK+   NPY+RGC  I+RCR
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

AT2G32835.1 RALF-like 163.4e-0534.48Show/hide
Query:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGFDATDSEEKPIDGKENDITN
        I+F+   M++++        A  + Y  +KGD  P C  K+P  C +  VN Y RGC  I RC RD    T+S    +D  E+ I N
Subjt:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGFDATDSEEKPIDGKENDITN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGG
TGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATTTG
ATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAA
ATAGAAAAGATTTATAAAGACGATGCACAAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTC
TCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGG
TGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATTTG
ATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAA
ATAGAAAAGATTTATAAAGACGATGCACAAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTC
TCATTAA
Protein sequenceShow/hide protein sequence
MTIIKGCMLSFIGILFVCIDMLVIINANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGFDATDSEEKPIDGKENDITNGEQDIIKEDEEKDIIDRE
IEKIYKDDAQNDVKDSEENIVKDNTHKINPNVTKDISH