| GenBank top hits | e value | %identity | Alignment |
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| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 1.0e-72 | 93.84 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLFDDIFKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEGD+ILMVLSPTLNYDGAPVT YSGQ+GKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFR+DQ+MFLLLRK+T
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 2.6e-71 | 91.72 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLF+D+FKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEG++ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| XP_022942165.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 1.5e-71 | 93.79 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLFDDIFKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEGD+ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMH KLYKL+D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQMMLKGDPLHC KFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 2.7e-73 | 94.52 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M E+LFDDIFKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEGD+ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFR+DQ+MFLLLRK+T
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
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| XP_038901286.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Benincasa hispida] | 2.2e-70 | 91.67 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLFDDIF VKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEG++ILMVLSPTLNYDGAPVTSY+GQEGKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
+GSGSDLKVEVYASFGGLQM+LKGDP+HCAKFR+DQ+MFLLLRK
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1C3H4 DNA-directed RNA polymerases II and V subunit 8A-like | 4.4e-69 | 88.97 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
MVELLFDDIFKVKCVNPDG+KYDKVSRI+A SEKL+M+MLLDVNTEIYPIDEG++ILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGKLYKLS+
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 1.2e-71 | 91.72 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLF+D+FKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEG++ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| A0A6J1FVR2 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 7.3e-72 | 93.79 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLFDDIFKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEGD+ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMH KLYKL+D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQMMLKGDPLHC KFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 1.2e-71 | 91.72 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ELLF+D+FKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEG++ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGK+YKLSD
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFR+DQ+MFLLLRK+
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| A0A6J1J6Q9 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 1.3e-73 | 94.52 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M E+LFDDIFKVKCVNPDGKKYDKVSRIEA SEKLSMYMLLDVNTEIYPIDEGD+ILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKL+D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFR+DQ+MFLLLRK+T
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKIT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 2.1e-28 | 40 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ++FDD+F VK V+PDGKK+D+VSR +E M +++D+N++IYP+ + D+ +VL+ TL DG + + ++EY+M+GK+Y+L D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
+ SG+D ++ YASFGGL M LKG+ ++ F +D +++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 1.2e-42 | 57.75 | Show/hide |
Query: LLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSDEGS
+LF+DIF V ++PDGKK+DKV+R++A S L M+M LDVNTE+YP+ GD+ + L+PTLN DG P T Y KK+LADK+EYIMHGKLYK+S E
Subjt: LLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
G K E+Y SFGGL M+LKGDP H + F +DQ +FLL+RK+
Subjt: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 1.9e-29 | 40.69 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M ++FDD+FKVK V+PDGKK+D+VSR +E M +++D+N++IYP+ + D++ +VL+ TL DG + + ++EY+M+GK+Y+L D
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
+ +G+D K+ YASFGGL M LKG+ ++ F +D +++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
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| Q54YW8 DNA-directed RNA polymerases I, II, and III subunit rpabc3 | 6.6e-30 | 45.14 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
M +LF+D F+VK ++PDGKK+D+VSR +SE M + +D+ T IYP+ +R MVL+ +LN DG+ S S K SLADK++Y+M+GK++K
Subjt: MVELLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
E S S KV V+ASFGGL ++L+GDP + +D ++LL++K
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 5.8e-42 | 56.34 | Show/hide |
Query: LLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSDEGS
++F+DIF V ++PDGKK+DKV+R+EA S L M+M LDVNTE+YP+ GD+ + ++PTLN DG P T Y KK+LADK+EYIMHGKLYK+S E
Subjt: LLFDDIFKVKCVNPDGKKYDKVSRIEAWSEKLSMYMLLDVNTEIYPIDEGDRILMVLSPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKLYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
G K E+Y SFGGL M+L+GDP H + F +DQ +FLL+RK+
Subjt: GSDLKVEVYASFGGLQMMLKGDPLHCAKFRMDQSMFLLLRKI
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