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Tan0000633 (gene) of Snake gourd v1 genome

Gene IDTan0000633
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionArabinogalactan peptide
Genome locationLG01:112331039..112331582
RNA-Seq ExpressionTan0000633
SyntenyTan0000633
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1684.62Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA
        MAAV+  SFMALVAVLF V+S+A+AQSAESPAPAPASPATSVVPSLS ACVGAFVAL+FGSA KA
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0657.81Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK
        MA V+ AS +AL+A++FAV S+A   + E+PAP+PASPATS+ PS   ACV AFVAL FGS  +
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-1684.62Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA
        MAAV+  SFMALVAVLF V+S+A+AQSAESPAPAPASPATSVVPSLS ACVGAFVAL+FGSA KA
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.3e-1686.15Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA
        MAAV+  SFMALVAVLFAVLS+A+AQSAESPAP PASPA SVVPSLSFACVGAF+ALLFGSA KA
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA

XP_040998978.1 probable protein phosphatase 2C 72 [Juglans microcarpa x Juglans regia]9.2e-0559.09Show/hide
Query:  AVTNASFMALVAVLFAVLSI---AIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA
        AV+ AS MAL+AV FAVLS+   A AQ+ E+PAP+P SPA S  PSL+FA +G+ VAL FGS  +A
Subjt:  AVTNASFMALVAVLFAVLSI---AIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein1.3e-0451.56Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK
        MAA++  S +AL+A++FA+ S+A   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS  +
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK

A0A2P5DTQ4 Arabinogalactan peptide8.4e-0451.56Show/hide
Query:  AAVTNASFMALVAVLFAVLS-IAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK
        A+ +NAS + L+AV+  VLS +  A +AE+PAP+PASPA+++ PS   AC+ A VAL+FGSA +
Subjt:  AAVTNASFMALVAVLFAVLS-IAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK

A0A2P5EL16 Arabinogalactan peptide8.4e-0452.46Show/hide
Query:  TNASFMALVAVLFAVLS-IAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK
        +NAS + L+AV+  VLS +  A +AE+PAP+PASPA+++ PS   AC+ A VAL+FGSA +
Subjt:  TNASFMALVAVLFAVLS-IAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFK

Q96504 CRG161.1e-1686.15Show/hide
Query:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA
        MAAV+  SFMALVAVLFAVLS+A+AQSAESPAP PASPA SVVPSLSFACVGAF+ALLFGSA KA
Subjt:  MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTCACCAACGCTTCCTTCATGGCTCTTGTAGCTGTTCTGTTCGCCGTACTCTCCATTGCCATCGCGCAGTCTGCTGAGTCTCCTGCTCCGGCACCGGCTTC
TCCGGCTACTTCTGTCGTGCCGTCCTTGAGCTTCGCTTGCGTTGGTGCTTTTGTCGCTCTCCTCTTTGGATCTGCATTTAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
CACTTTTTCCGTTGCCAAAGTTCCATTTCATCGATAGCTCTCTCAAATTTCTAGTCTTTTTCTTTCAAAACCCTAGAAATTTTCAGAGCAATGGCCGCCGTCACCAACGC
TTCCTTCATGGCTCTTGTAGCTGTTCTGTTCGCCGTACTCTCCATTGCCATCGCGCAGTCTGCTGAGTCTCCTGCTCCGGCACCGGCTTCTCCGGCTACTTCTGTCGTGC
CGTCCTTGAGCTTCGCTTGCGTTGGTGCTTTTGTCGCTCTCCTCTTTGGATCTGCATTTAAGGCTTGAGATTGACGTTGTTGTTTCTACGCGTTCTGTGATTCTAGCCAT
TCATTCGGTACTGATGCTCGATTATTGAGTGTATAGGATATGATATTCGATGTTGAGATTAGATTTTATTAGATACTGCTGGTTTGTATTCATGTATTCGTTGTGTGTTA
TCTCATTATTGTTCTTTTTATATATCGACATTATTTGAGTATATAAGTTATTTCAGTTTTCTACTCTCTGTTTCGTTTCGTGATATTGAAGATCTTCAGTTTCT
Protein sequenceShow/hide protein sequence
MAAVTNASFMALVAVLFAVLSIAIAQSAESPAPAPASPATSVVPSLSFACVGAFVALLFGSAFKA