; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000642 (gene) of Snake gourd v1 genome

Gene IDTan0000642
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-binding storekeeper protein-related transcriptional regulator
Genome locationLG11:63677076..63677759
RNA-Seq ExpressionTan0000642
SyntenyTan0000642
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585873.1 putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1129.76Show/hide
Query:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE
        +E++S  +   ++ + +   K   +   L W +EDE+IVL++L++F G N S   Y+  FY +V K L + Q+S +QLS  I   +K+YL +     E++
Subjt:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE

Query:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL---K
            + H   VF LS +IW          K  K+   R  Y K    Y +EE+ +  DCLT S +E  K++W+    +  +    +++F   L +L   K
Subjt:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL---K

Query:  TNMHN
        ++ HN
Subjt:  TNMHN

KAG6607616.1 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5053.5Show/hide
Query:  LNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDS
        +   +YEAPTC EL KIL ++YSL WSK DE+IVLEKL EF GQ++S NYYT QFYN V+K LSV + +NQL YMIYCLRKQYL++   S  D+      
Subjt:  LNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDS

Query:  HALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHNTHFE
          L+V ELS K+WEVD+   ++          D+Y ++L+VYVV+ L + ADCLT+ V+E+IKEDW++FR V+D+FR +Q RF+L LC+L  +MHNT  E
Subjt:  HALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHNTHFE

XP_022158998.1 probable transcription factor At4g01260 [Momordica charantia]1.1e-1227.6Show/hide
Query:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDSHALRVFELSTK
        +E KK  S++    WS  DE ++L+  +EF+G+N S   Y+  FY++V   LSV +S +QLS  +Y LRK++L    +     K    +   +++E+S  
Subjt:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDSHALRVFELSTK

Query:  IWEVDSN-------NNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHN
        IW  +SN        N  K     +L  + +E+     V+E +K+   C+  +V+ +I++DW+  +  QD++ +      L +  ++   +N
Subjt:  IWEVDSN-------NNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHN

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]7.9e-1129.59Show/hide
Query:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE
        +E++S  +   ++ + +   K   +   L W +EDE+IVL++L++F G N S   Y+  FY +V K L + Q+S +QLS  I   +K+YL +     E++
Subjt:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE

Query:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL
            + H   VF LS +IW          K  K+   R  Y K    Y +EE+ +  DCLT S +E  K++W+    +  +    +++F   L +L
Subjt:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL

XP_038877618.1 STOREKEEPER protein-like [Benincasa hispida]1.3e-1030.89Show/hide
Query:  ELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYL-----DHN----IESFEDEKDHLDSHAL
        E +K   ++    WS  DE  +LE  +EF+G+N +   Y+  FY++V   LS ++S +QLS  +Y LRK+++     D+N     E F DEK        
Subjt:  ELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYL-----DHN----IESFEDEKDHLDSHAL

Query:  RVFELSTKIWEVDSNN----------------NIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRM
         VFELS  IW  D  N                NII +W K + +   YEK  +++ +E +KL    + T V+E+++++W+D R  ++ + +
Subjt:  RVFELSTKIWEVDSNN----------------NIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRM

TrEMBL top hitse value%identityAlignment
A0A251JMP0 Uncharacterized protein3.1e-0538.54Show/hide
Query:  WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDS--HALRVFELSTKIWEVDSN
        WS++DE+ +L  L ++  +  S  Y     F+ ++ K L V +S+NQL   I  L+K+Y D NIE  E+ +D + S  H L+ FELS K W+ D N
Subjt:  WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDS--HALRVFELSTKIWEVDSN

A0A6J1DXL5 probable transcription factor At4g012605.3e-1327.6Show/hide
Query:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDSHALRVFELSTK
        +E KK  S++    WS  DE ++L+  +EF+G+N S   Y+  FY++V   LSV +S +QLS  +Y LRK++L    +     K    +   +++E+S  
Subjt:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHLDSHALRVFELSTK

Query:  IWEVDSN-------NNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHN
        IW  +SN        N  K     +L  + +E+     V+E +K+   C+  +V+ +I++DW+  +  QD++ +      L +  ++   +N
Subjt:  IWEVDSN-------NNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHN

A0A6J1E125 probable transcription factor At4g006103.0e-0829.78Show/hide
Query:  SLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHN-IESFEDEKDHLDSHALRVFELSTKIWEV--DSNN
        S  W +EDE+ VL++L+EFSG+N +   Y+ +FY +V K L  Q+S +Q+   I  LR++YL+++     +        H  +V   S +IW    + N 
Subjt:  SLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHN-IESFEDEKDHLDSHALRVFELSTKIWEV--DSNN

Query:  NIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHNT
        N  K    T+ + + YE+   V  +EE+++  DCL  S +E + +DW+    +  Q    + +    L +L     NT
Subjt:  NIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHNT

A0A6J1GK86 probable transcription factor At1g664203.8e-1129.59Show/hide
Query:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE
        +E++S  +   ++ + +   K   +   L W +EDE+IVL++L++F G N S   Y+  FY +V K L + Q+S +QLS  I   +K+YL +     E++
Subjt:  VEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKML-SVQLSENQLSYMIYCLRKQYLDHNIESFEDE

Query:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL
            + H   VF LS +IW          K  K+   R  Y K    Y +EE+ +  DCLT S +E  K++W+    +  +    +++F   L +L
Subjt:  KDHLDSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKL

A0A6J1I882 probable transcription factor At1g617302.5e-1030.05Show/hide
Query:  KHNFVEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLS-VQLSENQLSYMIYCLRKQYLDHNIES
        K+   E+ S   +         +KK + +   L W +EDE+IVL++L+EF G N S   Y+  FY +V K LS  Q+S +Q S  I   +K+YL +    
Subjt:  KHNFVEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLS-VQLSENQLSYMIYCLRKQYLDHNIES

Query:  FEDEKDHLDSHALRVFELSTKIW---EVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHL
         E++    + H   VF LS +IW      SN   +K           Y K    Y +EE+ +  DCLT S +E  K++W+    +  +    +++F+  L
Subjt:  FEDEKDHLDSHALRVFELSTKIW---EVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHL

Query:  CKL
         +L
Subjt:  CKL

SwissProt top hitse value%identityAlignment
Q9SYA9 Probable transcription factor At1g617302.1e-0630.37Show/hide
Query:  EAPTCDELKKILSQEYSLP--------WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDH
        EA      K++   E S+         WS+EDE++VL+ + +F        Y  T  FY+++ K +S ++S+NQ    I  LRK+Y+    +   +E   
Subjt:  EAPTCDELKKILSQEYSLP--------WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDH

Query:  LDSHALRVFELSTKIW-----EVDSN---NNIIKK
        + +H  + FELS  IW      +DSN   N + KK
Subjt:  LDSHALRVFELSTKIW-----EVDSN---NNIIKK

Arabidopsis top hitse value%identityAlignment
AT1G11510.1 DNA-binding storekeeper protein-related transcriptional regulator1.2e-0430.77Show/hide
Query:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFED--EKDHLDSHALRVFELS
        +E KK   Q     W+++DE++VL+ L +        N  T + Y  V K +S  +S+NQL   +  L+K+Y ++N+   +D  E   +  H  + FELS
Subjt:  DELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFED--EKDHLDSHALRVFELS

Query:  TKIW
          +W
Subjt:  TKIW

AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator1.5e-0730.37Show/hide
Query:  EAPTCDELKKILSQEYSLP--------WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDH
        EA      K++   E S+         WS+EDE++VL+ + +F        Y  T  FY+++ K +S ++S+NQ    I  LRK+Y+    +   +E   
Subjt:  EAPTCDELKKILSQEYSLP--------WSKEDELIVLEKLFEFSGQNESVNYY-TPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDH

Query:  LDSHALRVFELSTKIW-----EVDSN---NNIIKK
        + +H  + FELS  IW      +DSN   N + KK
Subjt:  LDSHALRVFELSTKIW-----EVDSN---NNIIKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAAACATAATTTTGTTGAGAAGCAAAGTCTGAATGACAAAAATTATGAAGCCCCCACATGTGATGAGTTGAAGAAGATACTGAGCCAAGAATATTCATTGCC
ATGGAGTAAAGAGGATGAATTAATTGTCCTCGAGAAGCTATTTGAATTTTCAGGCCAAAATGAGAGTGTTAATTATTACACACCCCAATTCTACAATTATGTCAACAAAA
TGTTAAGTGTTCAACTCTCTGAGAATCAATTGTCTTACATGATATATTGTTTAAGAAAACAATATTTAGATCATAATATTGAATCATTTGAAGATGAAAAGGATCATTTG
GATTCTCATGCCCTCAGAGTTTTTGAATTATCAACTAAAATATGGGAAGTTGATAGCAATAATAATATTATTAAGAAGTGGCCAAAGACAAAACTACTGAGAGATCATTA
TGAAAAATACTTACAAGTTTACGTTGTTGAAGAATTAAAGCTTCGGGCGGATTGCTTGACAACCTCTGTTATCGAAGAAATTAAGGAAGATTGGCAAGATTTTCGATTTG
TTCAAGATCAGTTTCGAATGATGCAAAATAGATTTTCTTTGCATCTTTGTAAATTGAAGACCAACATGCATAACACACATTTTGAAGTCGGACACTCCTTTAGAAGAAAA
AAACTTCCACATCTTAACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAAAACATAATTTTGTTGAGAAGCAAAGTCTGAATGACAAAAATTATGAAGCCCCCACATGTGATGAGTTGAAGAAGATACTGAGCCAAGAATATTCATTGCC
ATGGAGTAAAGAGGATGAATTAATTGTCCTCGAGAAGCTATTTGAATTTTCAGGCCAAAATGAGAGTGTTAATTATTACACACCCCAATTCTACAATTATGTCAACAAAA
TGTTAAGTGTTCAACTCTCTGAGAATCAATTGTCTTACATGATATATTGTTTAAGAAAACAATATTTAGATCATAATATTGAATCATTTGAAGATGAAAAGGATCATTTG
GATTCTCATGCCCTCAGAGTTTTTGAATTATCAACTAAAATATGGGAAGTTGATAGCAATAATAATATTATTAAGAAGTGGCCAAAGACAAAACTACTGAGAGATCATTA
TGAAAAATACTTACAAGTTTACGTTGTTGAAGAATTAAAGCTTCGGGCGGATTGCTTGACAACCTCTGTTATCGAAGAAATTAAGGAAGATTGGCAAGATTTTCGATTTG
TTCAAGATCAGTTTCGAATGATGCAAAATAGATTTTCTTTGCATCTTTGTAAATTGAAGACCAACATGCATAACACACATTTTGAAGTCGGACACTCCTTTAGAAGAAAA
AAACTTCCACATCTTAACTTGTAA
Protein sequenceShow/hide protein sequence
MGRKHNFVEKQSLNDKNYEAPTCDELKKILSQEYSLPWSKEDELIVLEKLFEFSGQNESVNYYTPQFYNYVNKMLSVQLSENQLSYMIYCLRKQYLDHNIESFEDEKDHL
DSHALRVFELSTKIWEVDSNNNIIKKWPKTKLLRDHYEKYLQVYVVEELKLRADCLTTSVIEEIKEDWQDFRFVQDQFRMMQNRFSLHLCKLKTNMHNTHFEVGHSFRRK
KLPHLNL