CuGenDBv2

Gene ID	Tan0000661
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein PARTING DANCERS
Genome location	LG11:621510..625808
RNA-Seq Expression	Tan0000661
Synteny	Tan0000661
Gene Ontology terms	GO:0000712 - resolution of meiotic recombination intermediates (biological process) GO:0006352 - DNA-templated transcription, initiation (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010845 - positive regulation of reciprocal meiotic recombination (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR039172 - Protein parting dancers

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138826.1 protein PARTING DANCERS isoform X3 [Cucumis sativus]

8.2e-80

87.06

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+  A+QM GN VKAKN G GVCLMSN WRDEQHPSFI F+SNFLC+NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSW+CSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        FANLYVVV LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD+ SKLRTE
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

XP_008441175.1 PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo]

7.0e-79

89.51

Show/hide

Query:  ANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVV
        A+QM GN +KAKN G GVCLMSN WRDEQHPSFI F+SNFLC+NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSWDCSNTSS+FSRVQKLKKQFANLYVVV
Subjt:  ANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVV

Query:  ALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
         LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD+ SKLRTE
Subjt:  ALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

XP_022152444.1 protein PARTING DANCERS isoform X1 [Momordica charantia]

4.8e-80

88.82

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+S AN+MAGN VKAKNS  GVCLMSN WRDEQHPSFI F+SNFL TNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        FAN Y VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDV SKLRTE
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

XP_022152445.1 protein PARTING DANCERS isoform X2 [Momordica charantia]

3.7e-80

88.37

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+S AN+MAGN VKAKNS  GVCLMSN WRDEQHPSFI F+SNFL TNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTEVS
        FAN Y VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDV SKLRTE S
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTEVS

XP_031737263.1 protein PARTING DANCERS isoform X4 [Cucumis sativus]

8.2e-80

87.06

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+  A+QM GN VKAKN G GVCLMSN WRDEQHPSFI F+SNFLC+NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSW+CSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        FANLYVVV LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD+ SKLRTE
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP7 Uncharacterized protein

4.0e-80

87.06

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+  A+QM GN VKAKN G GVCLMSN WRDEQHPSFI F+SNFLC+NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSW+CSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        FANLYVVV LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD+ SKLRTE
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

A0A1S3B2D1 uncharacterized protein LOC103485388 isoform X3

3.4e-79

89.51

Show/hide

Query:  ANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVV
        A+QM GN +KAKN G GVCLMSN WRDEQHPSFI F+SNFLC+NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSWDCSNTSS+FSRVQKLKKQFANLYVVV
Subjt:  ANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVV

Query:  ALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
         LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD+ SKLRTE
Subjt:  ALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

A0A6J1DDY5 protein PARTING DANCERS isoform X2

1.8e-80

88.37

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+S AN+MAGN VKAKNS  GVCLMSN WRDEQHPSFI F+SNFL TNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTEVS
        FAN Y VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDV SKLRTE S
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTEVS

A0A6J1DG15 protein PARTING DANCERS isoform X1

2.3e-80

88.82

Show/hide

Query:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ
        MA  S+S AN+MAGN VKAKNS  GVCLMSN WRDEQHPSFI F+SNFL TNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSS+FSRVQKLKKQ
Subjt:  MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQ

Query:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        FAN Y VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDV SKLRTE
Subjt:  FANLYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

A0A6J1JWN6 protein PARTING DANCERS

1.3e-78

89.76

Show/hide

Query:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL
        S+   NQM GN VKAKNSG GVCLMSN WRDEQHPS I F+SNFL TNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSS+F RVQKL KQFAN 
Subjt:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL

Query:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDV SKLRTE
Subjt:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

SwissProt top hits

e value

%identity

Alignment

F4IDW9 Protein PARTING DANCERS

3.3e-55

65.06

Show/hide

Query:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL
        S S  +Q++  LV   N   GVC+MSN W+ EQ PS I F+S FL  NSFRLNFV I PDLIFNCGG+S+AF FVT WD SN +S+FSRV++LK QFA L
Subjt:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL

Query:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        YVV  L TKEQ+DSF++SYF+  ME GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKL+ E
Subjt:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

Q6L5B5 Protein PARTING DANCERS homolog

1.4e-50

63.51

Show/hide

Query:  GVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVVALPTKEQNDSFVQS
        G GVC MS  WRD+Q PS I F++ FL  NS+RLNF+ I+PD IFN G LSVAF F T+WDC N  +VFSRV  LK+Q  +LYVVVA+PTKEQN+SF +S
Subjt:  GVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVVALPTKEQNDSFVQS

Query:  YFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        Y + GM++G P FVPV D EMGFEKIVKIAH+ G CKQQD+ S+L+ E
Subjt:  YFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

Arabidopsis top hits

e value

%identity

Alignment

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.3e-56

65.06

Show/hide

Query:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL
        S S  +Q++  LV   N   GVC+MSN W+ EQ PS I F+S FL  NSFRLNFV I PDLIFNCGG+S+AF FVT WD SN +S+FSRV++LK QFA L
Subjt:  SRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANL

Query:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE
        YVV  L TKEQ+DSF++SYF+  ME GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKL+ E
Subjt:  YVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTE

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGATTCCGTCACGGAGCGTTGCTAATCAAATGGCTGGAAATCTAGTGAAAGCAAAAAATTCTGGTGTTGGAGTCTGTTTGATGAGCAATAAATGGAGAGATGAGCA
GCATCCATCTTTCATCAAATTTGTGTCAAATTTCCTTTGCACAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGACTTGATATTCAATTGTGGGGGTTTATCGG
TGGCTTTTGCTTTCGTGACAAGTTGGGATTGCAGCAATACATCATCAGTCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTATACGTTGTCGTTGCCCTT
CCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAGATTGGTAAGCCACCGTTTGTACCAGTTCAGGATGTTGAGATGGGCTTCGAGAA
GATTGTAAAGATTGCACATTCTCGTGGAGCATGCAAGCAGCAAGATGTCACGTCAAAACTCAGGACAGAGGTCAGTTGGTGTAGATTATGTTCTACTTGAATTAGTAATT
AATGACAAATCAATATTTAGTGATCATATTGTGTCTTTTTTACACGAGTTTAATCACCGTCTCCCCCTTCTGGGGCTCTTGTTGAAGAGGAAGAGATCAGTGCAAGTCAT
GGATGCTTTTCGTAGAGTCATGTCTTCTGTACCAGGCATTGATGATCATGATGCAAATTCGCTAAATCAAGCCATTGGTTCAATTGAGGCGATCGCCAAAGCATCCAAGG
AGTACATTTTGGAGAACACAGATCTGTCAGTGGACAAGGCAGAGAGAATTAAGATCTTTTTCAGGGATCCAAAGTTCTACCTCAGTCCCAAAATAATTTGACGTTGGAAA
TTTCTTTTATCTCGGTTGGATTTCACGGAAGAGCTTCGAGGTTAGTCATATTTTAACAACTTTGCTTTTGTTGCCTACCGATACCCTGTAATTCACCGTTATGGTTTTGA
GCGAG

Protein sequence

Show/hide protein sequence

MAIPSRSVANQMAGNLVKAKNSGVGVCLMSNKWRDEQHPSFIKFVSNFLCTNSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSVFSRVQKLKKQFANLYVVVAL
PTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVTSKLRTEVSWCRLCST

Tan0000661 (gene) of Snake gourd v1 genome