; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000702 (gene) of Snake gourd v1 genome

Gene IDTan0000702
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionthylakoid lumenal 16.5 kDa protein, chloroplastic
Genome locationLG04:51243990..51249242
RNA-Seq ExpressionTan0000702
SyntenyTan0000702
Gene Ontology termsGO:0010206 - photosystem II repair (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599393.1 Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
KAG7030378.1 Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
XP_022999175.1 thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucurbita maxima]9.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
XP_038889145.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida]9.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
XP_038889146.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X2 [Benincasa hispida]9.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
TrEMBL top hitse value%identityAlignment
A0A0A0LI29 Uncharacterized protein1.0e-1388.89Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLE+Q VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
A0A1S3C541 thylakoid lumenal 16.5 kDa protein, chloroplastic1.0e-1388.89Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLE+Q VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
A0A5A7V8J2 Thylakoid lumenal 16.5 kDa protein1.0e-1388.89Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLE+Q VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
A0A6J1G2S1 thylakoid lumenal 16.5 kDa protein, chloroplastic4.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
A0A6J1KEL3 thylakoid lumenal 16.5 kDa protein, chloroplastic4.6e-1490.74Show/hide
Query:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        FISSFIFPLVGQGF DAN  ILEADDD ELLEKVKKDRKKRLERQ VISSANKE
Subjt:  FISSFIFPLVGQGFFDANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
SwissProt top hitse value%identityAlignment
O22773 Thylakoid lumenal 16.5 kDa protein, chloroplastic1.2e-0676.92Show/hide
Query:  DANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        DAN  ILEADDD ELLEKVK+DRKKR+ERQ V++SA KE
Subjt:  DANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
Q9FH86 Receptor-like protein 575.8e-0659.09Show/hide
Query:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
        VGI L  G+ SLV+SFT +CIWLKI E+K   EEGK S  M  Y
Subjt:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
Q9M2Y3 Receptor-like protein 449.0e-0756.82Show/hide
Query:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
        VGI L  G+ SL++SFT +C+WL+I E+K V EEGK S+ M DY
Subjt:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
Arabidopsis top hitse value%identityAlignment
AT3G49750.1 receptor like protein 446.4e-0856.82Show/hide
Query:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
        VGI L  G+ SL++SFT +C+WL+I E+K V EEGK S+ M DY
Subjt:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
AT4G02530.1 chloroplast thylakoid lumen protein8.4e-0876.92Show/hide
Query:  DANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
        DAN  ILEADDD ELLEKVK+DRKKR+ERQ V++SA KE
Subjt:  DANVVILEADDD-ELLEKVKKDRKKRLERQEVISSANKE
AT5G65830.1 receptor like protein 574.2e-0759.09Show/hide
Query:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY
        VGI L  G+ SLV+SFT +CIWLKI E+K   EEGK S  M  Y
Subjt:  VGIDLWDGLVSLVLSFTVICIWLKIIERKRVVEEGKTSKLMSDY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGAGAGGGAAAAACATTTACATTTTGCGCCACTTTCAATACTTTTCACTAACCCTTTTTGCGCCATTTTGCACCTCTCAAGTTTCATTTCCAGTTTCATTTT
CCCTCTAGTGGGTCAAGGATTTTTCGATGCAAATGTTGTGATTCTTGAAGCTGATGATGATGAGCTTTTGGAAAAGGTGAAGAAGGATAGAAAGAAAAGGCTCGAAAGAC
AGGAGGTTATCAGTTCTGCCAATAAAGAAACAGTTGGAATCGATTTATGGGATGGGCTCGTCAGCTTGGTGTTAAGCTTCACTGTAATTTGTATATGGTTGAAGATTATT
GAACGAAAGAGGGTGGTTGAAGAAGGGAAAACCAGTAAGCTCATGTCCGATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAGAGAGGGAAAAACATTTACATTTTGCGCCACTTTCAATACTTTTCACTAACCCTTTTTGCGCCATTTTGCACCTCTCAAGTTTCATTTCCAGTTTCATTTT
CCCTCTAGTGGGTCAAGGATTTTTCGATGCAAATGTTGTGATTCTTGAAGCTGATGATGATGAGCTTTTGGAAAAGGTGAAGAAGGATAGAAAGAAAAGGCTCGAAAGAC
AGGAGGTTATCAGTTCTGCCAATAAAGAAACAGTTGGAATCGATTTATGGGATGGGCTCGTCAGCTTGGTGTTAAGCTTCACTGTAATTTGTATATGGTTGAAGATTATT
GAACGAAAGAGGGTGGTTGAAGAAGGGAAAACCAGTAAGCTCATGTCCGATTATTGATCTTTAACACCCATTTTTCAGAGATTATTGAGATGTATTCTTGATCTATTTTT
TGTTCAGGGTTGTTGGATCATCACTGGA
Protein sequenceShow/hide protein sequence
MKKEREKHLHFAPLSILFTNPFCAILHLSSFISSFIFPLVGQGFFDANVVILEADDDELLEKVKKDRKKRLERQEVISSANKETVGIDLWDGLVSLVLSFTVICIWLKII
ERKRVVEEGKTSKLMSDY