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Tan0000710 (gene) of Snake gourd v1 genome

Gene IDTan0000710
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFanconi anemia group D2 protein
Genome locationLG06:11075599..11079207
RNA-Seq ExpressionTan0000710
SyntenyTan0000710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014563.1 hypothetical protein SDJN02_24741, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2364.15Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASF---------------------------------MERNFDALEARISNLESVRNRNSIPS
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSDASF                                 +ERNFDALEARISNLESVRNR+SIPS
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASF---------------------------------MERNFDALEARISNLESVRNRNSIPS

Query:  AEVFLF
        AEVFLF
Subjt:  AEVFLF

KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]9.2e-2662.79Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE----------VFLFFAIVLYVLCVWPL--CW
        MLRTRLFWFS+GF  TAASIS FVWRDLLAYRCALSSDASFMER+FDALEARISNLES RNRNS+ SAE          V    A VL VLC WP+  CW
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE----------VFLFFAIVLYVLCVWPL--CW

Query:  FLPKNLHFCILPFLLPVSSPHPHRREAIS
        +           F L       HRREAIS
Subjt:  FLPKNLHFCILPFLLPVSSPHPHRREAIS

XP_022953273.1 uncharacterized protein LOC111455871 isoform X1 [Cucurbita moschata]4.3e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

XP_022992002.1 uncharacterized protein LOC111488481 isoform X1 [Cucurbita maxima]4.3e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

XP_022992003.1 uncharacterized protein LOC111488481 isoform X2 [Cucurbita maxima]4.3e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

TrEMBL top hitse value%identityAlignment
A0A0A0K8L3 Uncharacterized protein4.5e-2662.79Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE----------VFLFFAIVLYVLCVWPL--CW
        MLRTRLFWFS+GF  TAASIS FVWRDLLAYRCALSSDASFMER+FDALEARISNLES RNRNS+ SAE          V    A VL VLC WP+  CW
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE----------VFLFFAIVLYVLCVWPL--CW

Query:  FLPKNLHFCILPFLLPVSSPHPHRREAIS
        +           F L       HRREAIS
Subjt:  FLPKNLHFCILPFLLPVSSPHPHRREAIS

A0A6J1GMY6 uncharacterized protein LOC111455871 isoform X12.1e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

A0A6J1GP63 uncharacterized protein LOC111455871 isoform X22.1e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

A0A6J1JNH5 uncharacterized protein LOC111488481 isoform X12.1e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

A0A6J1JXU9 uncharacterized protein LOC111488481 isoform X22.1e-2388.41Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFSVGF AT+ASISQFVWRDLLA+RCALSSD   +ERNFDALEARISNLESVRNR+SIPSAE
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07568.1 unknown protein8.1e-1253.73Show/hide
Query:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPS
        MLRTRL WF++GF  T  SI+  VWRDL A R A+SSD   M+  F ALE R+S LES    N  P+
Subjt:  MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAACTCGATTGTTCTGGTTCAGTGTTGGATTTGGGGCAACAGCCGCTTCCATTTCTCAATTCGTCTGGAGAGATCTATTGGCCTACCGATGTGCTCTTTCCTC
TGATGCAAGTTTTATGGAGCGGAATTTCGACGCACTGGAAGCTAGAATCTCGAATCTCGAGTCTGTTCGAAACCGGAATTCGATTCCATCCGCTGAGGTATTTCTCTTCT
TTGCTATTGTTTTATACGTGCTATGTGTGTGGCCTCTTTGTTGGTTTTTGCCTAAAAACTTACATTTTTGTATTTTGCCTTTTCTCTTACCTGTATCATCACCTCACCCA
CACAGGAGGGAAGCAATCTCATCTCATGAATGTCTTGTAGATGGAATTTTGTATCAACAGTTGTGCAGGTGTAACTCCTTTTCTTGCTTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAACTCGATTGTTCTGGTTCAGTGTTGGATTTGGGGCAACAGCCGCTTCCATTTCTCAATTCGTCTGGAGAGATCTATTGGCCTACCGATGTGCTCTTTCCTC
TGATGCAAGTTTTATGGAGCGGAATTTCGACGCACTGGAAGCTAGAATCTCGAATCTCGAGTCTGTTCGAAACCGGAATTCGATTCCATCCGCTGAGGTATTTCTCTTCT
TTGCTATTGTTTTATACGTGCTATGTGTGTGGCCTCTTTGTTGGTTTTTGCCTAAAAACTTACATTTTTGTATTTTGCCTTTTCTCTTACCTGTATCATCACCTCACCCA
CACAGGAGGGAAGCAATCTCATCTCATGAATGTCTTGTAGATGGAATTTTGTATCAACAGTTGTGCAGGTGTAACTCCTTTTCTTGCTTTCCCTGA
Protein sequenceShow/hide protein sequence
MLRTRLFWFSVGFGATAASISQFVWRDLLAYRCALSSDASFMERNFDALEARISNLESVRNRNSIPSAEVFLFFAIVLYVLCVWPLCWFLPKNLHFCILPFLLPVSSPHP
HRREAISSHECLVDGILYQQLCRCNSFSCFP