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Tan0000720 (gene) of Snake gourd v1 genome

Gene IDTan0000720
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG09:67855566..67856916
RNA-Seq ExpressionTan0000720
SyntenyTan0000720
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146660.2 glycine-rich cell wall structural protein 2 [Cucumis sativus]2.4e-3784.97Show/hide
Query:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS
        MASIKSLA  VC LLS SAI+SE RVARKDLG++LGG+GVGLG GIGLG+G +GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE    AGSYAGS
Subjt:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS

Query:  RAGSGSGGNRNGGSGYGSGYGGGSGRG-----DGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNGGSGYGSGYGGGSGRG     +GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNGGSGYGSGYGGGSGRG-----DGEGYGEGHGYGEGRGYGGGN
XP_008443813.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]9.0e-3784.87Show/hide
Query:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS
        MASIKSLA  VC LLS S  +SE RVARKDLG++LGGLGVGLGAGIGLG+G +GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE    AGSYAGS
Subjt:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS

Query:  RAGSGSGGNRNGGSGYGSGYGGGSGR----GDGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNGGSGYGSGYGGGSGR    G+GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNGGSGYGSGYGGGSGR----GDGEGYGEGHGYGEGRGYGGGN
XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]4.5e-3684.56Show/hide
Query:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG
        MASI SL  VCFLLS S I+S+ RVARKDLGL+LGGLGVG+G GIGLGLG +GSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSYAGSRAG
Subjt:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG

Query:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
        SGSG NRNGGSG GSGYGGGSGRG     GEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
XP_023515817.1 cell wall protein IFF6-like isoform X1 [Cucurbita pepo subsp. pepo]2.7e-3375.15Show/hide
Query:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG
        MASI SL  VCFLLS SAI+S+ RVARKDLGL+LGGLGVG+G GIGLGLG +GSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSYAGSRAG
Subjt:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG

Query:  SGSGG--------------------NRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
        SGSG                     NRNGGSG GSGYGGGSGRG     GEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGG--------------------NRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
XP_023515819.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]5.8e-3684.56Show/hide
Query:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG
        MASI SL  VCFLLS SAI+S+ RVARKDLGL+LGGLGVG+G GIGLGLG +GSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSYAGSRAG
Subjt:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG

Query:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
        S SG NRNGGSG GSGYGGGSGRG     GEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein1.1e-3784.97Show/hide
Query:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS
        MASIKSLA  VC LLS SAI+SE RVARKDLG++LGG+GVGLG GIGLG+G +GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE    AGSYAGS
Subjt:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS

Query:  RAGSGSGGNRNGGSGYGSGYGGGSGRG-----DGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNGGSGYGSGYGGGSGRG     +GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNGGSGYGSGYGGGSGRG-----DGEGYGEGHGYGEGRGYGGGN
A0A1S3B9N0 glycine-rich cell wall structural protein 2-like4.4e-3784.87Show/hide
Query:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS
        MASIKSLA  VC LLS S  +SE RVARKDLG++LGGLGVGLGAGIGLG+G +GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE    AGSYAGS
Subjt:  MASIKSLAF-VCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS

Query:  RAGSGSGGNRNGGSGYGSGYGGGSGR----GDGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNGGSGYGSGYGGGSGR    G+GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNGGSGYGSGYGGGSGR----GDGEGYGEGHGYGEGRGYGGGN
A0A6J1C497 putative glycine-rich cell wall structural protein 12.1e-3181.08Show/hide
Query:  MASIKSLAFVCFLLSLS-AIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS
        MA+I+  A V F+L LS AI+SE RVARKDLG++LGG+GVGLGAGIGLG G +GSGSG+G+GSGSGSGSSSSSSSYSSSSSSGSGAGSE    AGSYAGS
Subjt:  MASIKSLAFVCFLLSLS-AIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSE----AGSYAGS

Query:  RAGSGSGGNRNGGSGYGSGYGGGSGRGDGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNR  GSG GSGYGGGSGRG GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNGGSGYGSGYGGGSGRGDGEGYGEGHGYGEGRGYGGGN
A0A6J1E2L1 cell wall protein IFF6-like isoform X15.0e-3374.56Show/hide
Query:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG
        MASI SL  VCFLLS S I+S+ RVARKDLGL+LGGLGVG+G GIGLGLG +GSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSYAGSRAG
Subjt:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG

Query:  SGSGG--------------------NRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
        SGSG                     NRNGGSG GSGYGGGSGRG     GEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGG--------------------NRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X32.2e-3684.56Show/hide
Query:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG
        MASI SL  VCFLLS S I+S+ RVARKDLGL+LGGLGVG+G GIGLGLG +GSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSYAGSRAG
Subjt:  MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAG

Query:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
        SGSG NRNGGSG GSGYGGGSGRG     GEGYGEGHGYGEGRGYGGGN
Subjt:  SGSGGNRNGGSGYGSGYGGGSGRGD----GEGYGEGHGYGEGRGYGGGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein3.0e-1469.89Show/hide
Query:  LLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGL-GENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG--AGSEAGSYAGSRAGSGSG
        ++S   +++E R+ARKDLG++LGG+G+GLG G+G+GL G +GSG+G+GSGSGSGS SSSSSSS SSSSSSGSG  AGS AGS+AGSRAGSGSG
Subjt:  LLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGL-GENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG--AGSEAGSYAGSRAGSGSG
AT4G30460.1 glycine-rich protein3.3e-2163.51Show/hide
Query:  SLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSRAGSGSG
        SL  +  +L+ S ++SE RVARKDLGL+LGG+G G+G GIG+G G +GSG+G+GSGSG G  SSSSSSS SSSSSSG G   AGSEAGSYAGS AGSGSG
Subjt:  SLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSRAGSGSG

Query:  G--------NRNGGSGYGSGYGGGSGRGDGEGYGEGHGYGEGRGYGGG
        G           GG G+G G GGG GRG G G G G GYGEG GYGGG
Subjt:  G--------NRNGGSGYGSGYGGGSGRGDGEGYGEGHGYGEGRGYGGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCAAGTCCCTCGCTTTTGTTTGTTTTTTACTCTCTTTGTCCGCCATTATCTCTGAATGTCGAGTGGCCAGGAAGGATCTCGGCCTTAACCTTGGAGGACT
TGGAGTTGGACTTGGAGCTGGAATAGGCTTAGGCTTAGGTGAAAACGGGTCGGGTTCTGGGTCCGGGTCCGGGTCTGGGTCTGGATCTGGGTCGAGTTCATCTTCTTCAT
CATACTCCTCAAGCTCAAGCTCTGGGTCTGGAGCTGGGTCCGAAGCTGGATCCTATGCAGGTTCTCGGGCAGGCTCAGGTTCGGGTGGAAACAGGAATGGAGGCTCGGGG
TACGGTTCGGGATACGGCGGAGGTTCGGGCAGAGGCGACGGTGAAGGATATGGTGAAGGTCATGGATACGGCGAGGGCCGTGGTTATGGCGGAGGCAACTGA
mRNA sequenceShow/hide mRNA sequence
CCAAACTTCTTCATTCAAATCCCACCACTTTTAAAACTTTAGCCAAAGCATTTGAACAACAACACTTGTCCAAACGCCATACAATATTACTCTTCAAACAATTTGGGGCA
TTTTCCTCAGCCACAGAAGTTGCCTCCGCCAACCTTTTTAATTTGTAGTGGCAACCTCGCCATTTCCCAAACAAACCCATTATAAATAGCTCCCTCAAGTCTCCTCAATT
CCCACAACAAACCCATTAAATTAAAACACTAGTCTCAGTTACCTTGTGTTTTTAAACAATGGCTTCAATCAAGTCCCTCGCTTTTGTTTGTTTTTTACTCTCTTTGTCCG
CCATTATCTCTGAATGTCGAGTGGCCAGGAAGGATCTCGGCCTTAACCTTGGAGGACTTGGAGTTGGACTTGGAGCTGGAATAGGCTTAGGCTTAGGTGAAAACGGGTCG
GGTTCTGGGTCCGGGTCCGGGTCTGGGTCTGGATCTGGGTCGAGTTCATCTTCTTCATCATACTCCTCAAGCTCAAGCTCTGGGTCTGGAGCTGGGTCCGAAGCTGGATC
CTATGCAGGTTCTCGGGCAGGCTCAGGTTCGGGTGGAAACAGGAATGGAGGCTCGGGGTACGGTTCGGGATACGGCGGAGGTTCGGGCAGAGGCGACGGTGAAGGATATG
GTGAAGGTCATGGATACGGCGAGGGCCGTGGTTATGGCGGAGGCAACTGAAAAATAAAAGCCAATCAATCATAGGATAGGTAGGTAAAGGTTACGAGGTTGATTTAGATC
AACTTTATTTTATGTATTTAAATAAAGGTAAGATGATAAGTCGTGTTGTGAAATTGTTCTTGTTCAGTTTGTTTGCGTTTGTGTGGGTGTCAGTGTCAATTTTCATGTGT
ATGTTTCAGAATAATATAAATTCAGACTTGGTGGAATTTATATTGCAGAAAATGGCGTCTTGGAACTTTAGTGCTAGTTTATGACGTTGAAAAATATAATATGGATTATG
GACAGGACAGCTGTGTAAATGTAATATTTGCCGGTAGACGCTTTCGCAACTTTAGGTCAAAAATTACATGAGCTTTCCTTTCCAGCTAGTTTTTTTGTTTGCCTTCGTGT
TGGTAATAATATAGAGGCTATATTATTAAAAATATTCTTCAACTTTAACCTTTTATTTCAAAAATATACGTCCTAAACTTTTAAAAGTTTCAAAATACCTTCCAACTTTC
TAAAAAGTTTTTAAAAATGCCATTCTATTTAAAATGAGAGACGGAAAATAGATGTGTTACGATGGCTTATGTACGGAAGGTTTAGTACTAAAGAATGAAACAATAATGTG
TTTTTTAGATTGTCACTAGGATTTGTCTTAG
Protein sequenceShow/hide protein sequence
MASIKSLAFVCFLLSLSAIISECRVARKDLGLNLGGLGVGLGAGIGLGLGENGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSG
YGSGYGGGSGRGDGEGYGEGHGYGEGRGYGGGN