| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.1e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| A0A5A7TWB9 Gag/pol protein | 1.1e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
|
|
| A0A5A7TZD7 Gag/pol protein | 1.1e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
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| A0A5A7UGV2 Gag/pol protein | 1.1e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
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| A0A5A7V4M1 Gag/pol protein | 1.1e-176 | 48.46 | Show/hide |
Query: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
MN AVIDE SQVSFILESLP+SFLQF SNAVMNKI Y LTTLLNELQ+FESL+K KGQ GEAN+ +++F + S+SGTK + KK+KGG+G
Subjt: MNEAVIDEQSQVSFILESLPKSFLQFHSNAVMNKIEYNLTTLLNELQSFESLIKNKGQADGEANLFAHSKRFQKSSSSGTKPCGLTR-----KKRKGGKG
Query: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
KA A I + K K+GK DLLVLETCLVEN+D WI+DSGATNHVCSSFQ SS+++LE GEMT+RVG
Subjt: ------------KASATADI--------------------ELKEKKGKLDLLVLETCLVENNDFTWILDSGATNHVCSSFQKTSSFKELEEGEMTLRVG-
Query: -----------------------------------------------------------------------------RETSSQ-----------------
R +S+
Subjt: -----------------------------------------------------------------------------RETSSQ-----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
L+Q + LEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP TPQ++GVSERRNRTLLDMVRSMMSYA LP SFWGYA
Subjt: ----LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYA
Query: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
++TAV ILN VPSKSVSETP +LW GRK SL+HFRIWGC AHVL PKKLEPRS+LC FVGYPK TRGG FYDP++NKV VSTNATFLEEDH+R HKPR
Subjt: IKTAVQILNSVPSKSVSETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPR
Query: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
SK+VLN E T TRVV + +RV +S+R+ QSL RR + I + E DKD+WIKAM+L
Subjt: SKLVLN----EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQSLGMSRRRWEKIHCLI------------------------SSNEWRDKDQWIKAMDL
Query: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
E+ESM FNSVW+LVDQ +GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EGVDYEE F PVAMLKSIRILLSIAA++DYEIWQMDVKTAFLNGNL
Subjt: EMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNL
Query: DESIYMSQPEG
+E+IYM QPEG
Subjt: DESIYMSQPEG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-44 | 26.13 | Show/hide |
Query: LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTA
L++++ F+++ AK E + L D G EY+ + + ++ GI L+ P+TPQ +GVSER RT+ + R+M+S A+L SFWG A+ TA
Subjt: LVQWQMPTLEKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTA
Query: VQILNSVPSKSV---SETPFELWKGRKPSLQHFRIWGCLAHVLVTIPK-KLEPRSRLCQFVGYPKETRGGLFYD--------------------------
++N +PS+++ S+TP+E+W +KP L+H R++G +V + + K + +S FVGY E G +D
Subjt: VQILNSVPSKSV---SETPFELWKGRKPSLQHFRIWGCLAHVLVTIPK-KLEPRSRLCQFVGYPKETRGGLFYD--------------------------
Query: -----------------PQENKVIVST----------NATFLEE-------------------------------DHMRNHKPRSKLVLNEA--------
P +++ I+ T N FL++ +++ K +K LNE+
Subjt: -----------------PQENKVIVST----------NATFLEE-------------------------------DHMRNHKPRSKLVLNEA--------
Query: -----------------THEPTRVVNQAGPSS----RVDGRASTSSRSRPSQSLGMSRRRWEKI----HCLIS-------SNEWR-DKDQWIKAMDLEME
T E + + P+ + R S +++P S K+ H + + ++R DK W +A++ E+
Subjt: -----------------THEPTRVVNQAGPSS----RVDGRASTSSRSRPSQSLGMSRRRWEKI----HCLIS-------SNEWR-DKDQWIKAMDLEME
Query: SMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNLDES
+ N+ W + + E + +W++ K + G +KARLVA+GFTQ+ +DYEE F PVA + S R +LS+ Y+ ++ QMDVKTAFLNG L E
Subjt: SMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDVKTAFLNGNLDES
Query: IYMSQPEGL
IYM P+G+
Subjt: IYMSQPEGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-69 | 37.86 | Show/hide |
Query: FKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPSKS
F+++ A VE G+ +K LRSD GGEY F++Y HGI+ + + P TPQ +GV+ER NRT+++ VRSM+ A+LP SFWG A++TA ++N PS
Subjt: FKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPSKS
Query: VS-ETPFELWKGRKPSLQHFRIWGC--LAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLN------
++ E P +W ++ S H +++GC AHV KL+ +S C F+GY E G +DP + KVI S + F E +R S+ V N
Subjt: VS-ETPFELWKGRKPSLQHFRIWGC--LAHVLVTIPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEEDHMRNHKPRSKLVLN------
Query: -----------------------------------------EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQS--LGMSRRRWEKIHCLISSNEWRDK
E PT+ Q P R + R SR PS L R E + ++S E K
Subjt: -----------------------------------------EATHEPTRVVNQAGPSSRVDGRASTSSRSRPSQS--LGMSRRRWEKIHCLISSNEWRDK
Query: DQWIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDV
+Q +KAM EMES+ N ++LV+ +G RP+ CKW++K K+D K+ +KARLV KGF Q++G+D++EIF PV + SIR +LS+AA D E+ Q+DV
Subjt: DQWIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDV
Query: KTAFLNGNLDESIYMSQPEG
KTAFL+G+L+E IYM QPEG
Subjt: KTAFLNGNLDESIYMSQPEG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.8e-12 | 39.53 | Show/hide |
Query: WIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIA
W +AM E++++ N W LV +GCKW++K K + G + KARLVAKGF Q EG+ + E + PV +IR +L++A
Subjt: WIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.1e-36 | 25.19 | Show/hide |
Query: EKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPS
E F +K +EN I T SD GGE++ L +Y +HGI S P+TP+ +G+SER++R +++ +++S+A +P ++W YA AV ++N +P+
Subjt: EKFKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPS
Query: KSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVT--IPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEE-----------DHMRNHKP
+ E+PF+ G P+ R++GC + + KL+ +SR C F+GY L Q +++ +S + F E ++ +
Subjt: KSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVT--IPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLEE-----------DHMRNHKP
Query: RSKLVLNEATHEPTRVV-------------------------NQAGPSSRVDGRASTS------------------------------------------
S V + T PTR N SS +D S+S
Subjt: RSKLVLNEATHEPTRVV-------------------------NQAGPSSRVDGRASTS------------------------------------------
Query: -------SRSRPSQSLGMS-------------------------------------------------------RRRWEKIHCLISSNEWR------DKD
S S P+QS S ++ L + +E R +
Subjt: -------SRSRPSQSLGMS-------------------------------------------------------RRRWEKIHCLISSNEWR------DKD
Query: QWIKAMDLEMESMDFNSVWELVDQSEG-VRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDV
+W AM E+ + N W+LV V +GC+WI+ +K ++ G + +KARLVAKG+ QR G+DY E F PV SIRI+L +A + I Q+DV
Subjt: QWIKAMDLEMESMDFNSVWELVDQSEG-VRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYEIWQMDV
Query: KTAFLNGNLDESIYMSQPEG
AFL G L + +YMSQP G
Subjt: KTAFLNGNLDESIYMSQPEG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-37 | 24.25 | Show/hide |
Query: WQMPTLEK------FKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAI
W P +K F +K+ VEN I TL SD GGE++ LR DY+ +HGI S P+TP+ +G+SER++R +++M +++S+A +P ++W YA
Subjt: WQMPTLEK------FKEYKAKVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSQLSAPNTPQKHGVSERRNRTLLDMVRSMMSYAQLPASFWGYAI
Query: KTAVQILNSVPSKSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVT--IPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLE--------
AV ++N +P+ + ++PF+ G+ P+ + +++GC + + KLE +S+ C F+GY L ++ S + F E
Subjt: KTAVQILNSVPSKSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVT--IPKKLEPRSRLCQFVGYPKETRGGLFYDPQENKVIVSTNATFLE--------
Query: -----------------------------------------------------------------------------------------EDHMRNHKPRS
+ H + +
Subjt: -----------------------------------------------------------------------------------------EDHMRNHKPRS
Query: KLVLN-----------------------EATHEPTRVVNQAGPSSRVDGRAST------------------------SSRSRPSQSLGMSRRRWEKIHCL
+LN + H PT + + P+S ST S +R + +++ L
Subjt: KLVLN-----------------------EATHEPTRVVNQAGPSSRVDGRAST------------------------SSRSRPSQSLGMSRRRWEKIHCL
Query: ISSNEWR------DKDQWIKAMDLEMESMDFNSVWELV-DQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRIL
+++E R D+W +AM E+ + N W+LV V +GC+WI+ +K ++ G + +KARLVAKG+ QR G+DY E F PV SIRI+
Subjt: ISSNEWR------DKDQWIKAMDLEMESMDFNSVWELV-DQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRIL
Query: LSIAAFYDYEIWQMDVKTAFLNGNLDESIYMSQPEG
L +A + I Q+DV AFL G L + +YMSQP G
Subjt: LSIAAFYDYEIWQMDVKTAFLNGNLDESIYMSQPEG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.9e-30 | 46.03 | Show/hide |
Query: NEWRDKDQWIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYE
NE ++ W AMD E+ +M+ WE+ +PIGCKW+YK K ++ G ++ +KARLVAKG+TQ+EG+D+ E F PV L S++++L+I+A Y++
Subjt: NEWRDKDQWIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIAAFYDYE
Query: IWQMDVKTAFLNGNLDESIYMSQPEG
+ Q+D+ AFLNG+LDE IYM P G
Subjt: IWQMDVKTAFLNGNLDESIYMSQPEG
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 2.5e-08 | 36.59 | Show/hide |
Query: NRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPSKSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSR
NRT+++ VRSM+ LP +F A TAV I+N PS +++ P E+W P+ + R +GC+A++ KL+PR++
Subjt: NRTLLDMVRSMMSYAQLPASFWGYAIKTAVQILNSVPSKSVS-ETPFELWKGRKPSLQHFRIWGCLAHVLVTIPKKLEPRSR
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0e-13 | 39.53 | Show/hide |
Query: WIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIA
W +AM E++++ N W LV +GCKW++K K + G + KARLVAKGF Q EG+ + E + PV +IR +L++A
Subjt: WIKAMDLEMESMDFNSVWELVDQSEGVRPIGCKWIYKRKRDATGKVQTFKARLVAKGFTQREGVDYEEIFFPVAMLKSIRILLSIA
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