CuGenDBv2

Gene ID	Tan0000761
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L13a
Genome location	LG11:58994624..58997256
RNA-Seq Expression	Tan0000761
Synteny	Tan0000761
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005829 - cytosol (cellular component) GO:0015934 - large ribosomal subunit (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597292.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+  ++ E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

KJB72097.1 hypothetical protein B456_011G159000 [Gossypium raimondii]

5.7e-45

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Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI+AKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

XP_022936364.1 60S ribosomal protein L13a-4-like [Cucurbita moschata]

3.4e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+  ++ E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

XP_023521847.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]

3.4e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+  ++ E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

XP_038878195.1 60S ribosomal protein L13a-4-like [Benincasa hispida]

4.4e-45

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Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI+AKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L439 Uncharacterized protein

2.8e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE++ +  E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

A0A5A7U034 60S ribosomal protein L13a-4

2.8e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE++ +  E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

A0A6J1F834 60S ribosomal protein L13a-4-like

1.6e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+  ++ E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

A0A6J1ICM6 60S ribosomal protein L13a-4-like

1.6e-45

56.63

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRLSSIIAKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+  ++ E+ K+  ++ +K ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQE

M5XEU8 Uncharacterized protein

2.8e-45

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Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI+AKELL+GQKVVVVRCEEICISGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAPAKILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

SwissProt top hits

e value

%identity

Alignment

O65055 60S ribosomal protein L13a

1.5e-43

50.72

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI+AKELL GQ+VVVVRCEEIC+SGGLVRQKM Y+RFLRKRMNTKPSHGPIHFRAP++ILWRTI GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 F      + +  +  I   +    +      CL+G L   VG   F                   +  T L+E+ K K +++ + ++   K
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  QRPKTIK
         R K ++
Subjt:  QRPKTIK

Q9FKC0 60S ribosomal protein L13a-4

7.8e-45

51.74

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI AKELL+GQKVV+VRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+   + E+ K+  ++ +K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

Q9LRX8 60S ribosomal protein L13a-2

2.0e-45

53.23

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHM GRL+SIIAKELL+GQ VVVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 F      + KV +  I   +    + +    CL+G L   VG + +       T+K  + +V+ KE++ +L E+ K+  ++  K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

Q9SFU1 60S ribosomal protein L13a-1

3.1e-46

51.24

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+S++AK+LL+GQ +VVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
         N       F      + K+ +  +   +    + +    CL+G L   VG + +       T+K  +NK   KE+  ++ E+ K+  ++  K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

Q9SVR0 60S ribosomal protein L13a-3

5.0e-44

51.74

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVD RHHMLGRL+S  AKELL+GQ+VVVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 F      + K+ +  I   +    + S    CL+G L   VG + +       T+K  + K   KE++  + E+ K+  ++  K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

2.2e-47

51.24

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+S++AK+LL+GQ +VVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
         N       F      + K+ +  +   +    + +    CL+G L   VG + +       T+K  +NK   KE+  ++ E+ K+  ++  K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

AT3G07110.2 Ribosomal protein L13 family protein

4.2e-46

50.99

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+S++AK+LL+GQ +VVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKL-FKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTK
         N       F      + K+ +  +   +    + +    CL+G L   VG + +       T+K   +NK   KE+  ++ E+ K+  ++  K ++  +
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKL-FKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTK

Query:  KQ
        ++
Subjt:  KQ

AT3G24830.1 Ribosomal protein L13 family protein

1.4e-46

53.23

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHM GRL+SIIAKELL+GQ VVVVRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 F      + KV +  I   +    + +    CL+G L   VG + +       T+K  + +V+ KE++ +L E+ K+  ++  K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

AT5G48760.1 Ribosomal protein L13 family protein

5.5e-46

51.74

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI AKELL+GQKVV+VRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+   + E+ K+  ++ +K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

AT5G48760.2 Ribosomal protein L13 family protein

5.5e-46

51.74

Show/hide

Query:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG
        MVSGSGIC K VVVDARHHMLGRL+SI AKELL+GQKVV+VRCEEIC+SGGLVRQKM YMRFLRKRMNTKPSHGPIHFRAP+KI WRT+ GMIPHKTKRG
Subjt:  MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRG

Query:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK
                 +      + K+ +  I   +    + +    CL+G L   VG + +       T+K  + K   KE+   + E+ K+  ++ +K ++  ++
Subjt:  TNINTITNCF-----TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKK

Query:  Q
        +
Subjt:  Q

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGTCGGGTTCTGGAATCTGTGTGAAGTGCGTCGTCGTCGACGCCAGGCACCATATGCTCGGGAGGCTTTCTTCGATCATCGCTAAAGAGCTTCTCGATGGCCAGAA
GGTGGTCGTTGTTCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAATTACATGAGGTTCTTGAGGAAGCGTATGAATACCAAGCCCTCTCATG
GTCCCATTCACTTCCGTGCTCCTGCCAAGATCCTTTGGCGAACAATCTGTGGTATGATCCCACACAAGACAAAGCGTGGGACTAATATAAACACTATAACAAACTGCTTC
ACATGGACAAAAGTGAACCAAAATTACATAGCTTCAAATATTGGGAAATGGATTGTCCATTCAATTCTGGGAAGATGCCTGGTTGGGGGACTCGGCTTTCATGTTGGCCT
TTCCTTCTTTGTTCACTCTTGCAACCAACAAACAATGAAACTATTCAAAAATAAAGTGAGGACAAAGGAGAAAACAACATCTCTCCAAGAACAACCCAAAAGAAAGAGAA
GAATAACCATAAAAATACAAGAACCAACGAAAAAACAAAGACCAAAAACTATAAAAGGTTGA

mRNA sequence

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Protein sequence

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MVSGSGICVKCVVVDARHHMLGRLSSIIAKELLDGQKVVVVRCEEICISGGLVRQKMNYMRFLRKRMNTKPSHGPIHFRAPAKILWRTICGMIPHKTKRGTNINTITNCF
TWTKVNQNYIASNIGKWIVHSILGRCLVGGLGFHVGLSFFVHSCNQQTMKLFKNKVRTKEKTTSLQEQPKRKRRITIKIQEPTKKQRPKTIKG

Tan0000761 (gene) of Snake gourd v1 genome