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Tan0000776 (gene) of Snake gourd v1 genome

Gene IDTan0000776
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand
Genome locationLG02:84735382..84735660
RNA-Seq ExpressionTan0000776
SyntenyTan0000776
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]3.6e-3175.82Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        MGNSKS TY+RVLVPF+EEQLA++FK+HD+DGDG LTKEELK AF +LGS FS+FR +EALRAAD +GDG ISMDEM KL++YAK RKYTI
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3481.52Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC
        MGNSKS TY+RVLVP TEEQLA IFKSHD+DGDGKLTKEELK AFN+LGS FSSFRA EALRAADADGDGTI+M EM KL++Y K RKYT+C
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3277.17Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC
        MGNSKS TY+RVLVPF+EEQLA +FK+HD DGDGKLTKEELK AF++LGS FSSFR +EALRAAD DGDG ISM EM KL++YAK RKYT+C
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3480.43Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC
        MGN+KST Y+RVLVPFTEEQLA IFKSHD+DGDGKL+KEELK AFN+LGS FSSFR KEALRAAD +GDG ISMDEM KL++Y KGRKYT+C
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3277.17Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC
        MGNSKS TY+RVLVPF+EEQLA +FK+HD DGDGKLTKEELK AF++LGS FSSFR +EALRAAD DGDG ISM EM KL++YAK RKYT+C
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein8.7e-3174.73Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        MGNSKS TY+RVLVPF+EEQLA++FK+HD+DGDG LTKEELK AF +LGS F +FR +EALRAAD +GDG ISMDEM KL++YAK RKYTI
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

A0A2N9FYQ0 Uncharacterized protein7.7e-1955.17Show/hide
Query:  KSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        K  +++R  +PFTEEQL +IFKSHD DGDGKL+++E+K AF +LGS + ++RA +A+  ADAD DG I  +E+KKLV+YA    YTI
Subjt:  KSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.8e-3175.82Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        MGNSKS TY+RVLVPF+EEQLA++FK+HD+DGDG LTKEELK AF +LGS FS+FR +EALRAAD +GDG ISMDEM KL++YAK RKYTI
Subjt:  MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

A0A5A7VBH2 Calcium-binding EF-hand1.4e-1755.42Show/hide
Query:  YRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        Y+R  VPF+ +QL DIF  HD DGDG+L++ ELK AF+ LGS +S FRA+++L+AADADGDG +++DE+  L++YA  R+Y I
Subjt:  YRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

A0A7N2KRS3 Uncharacterized protein3.4e-1956.32Show/hide
Query:  KSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI
        K+  ++R  VPF E+QL +IFKSHD DGDGKL+++ELK+AF +LGS + ++R  +ALR ADA+ DG I+ DE+KKLVEYA    YT+
Subjt:  KSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTI

SwissProt top hitse value%identityAlignment
O96102 Calmodulin1.7e-0740Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        TEE++ + FK  D+DG+G ++  EL+H    LG   S     E +R AD DGDG ++ DE  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

P02599 Calmodulin2.2e-0738.46Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        TEE++ + FK  D+DG+G ++  EL+H    LG   ++    E +R AD DGDG ++ DE  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

P05933 Calmodulin3.8e-0739.06Show/hide
Query:  EEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        EE++ + FK  D+DG+G +T EEL H    LG   S     + +R AD DGDG I+ +E  +++
Subjt:  EEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

P24044 Calmodulin1.0e-0740Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        TEE+L + F+  D+DGDG ++ +EL+H    LG   ++    E +R AD DGDG I+ +E  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

P62203 Calmodulin1.0e-0740Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        TEE+L + F+  D+DGDG ++ +EL+H    LG   ++    E +R AD DGDG I+ +E  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein3.5e-0838.57Show/hide
Query:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYA
        P+TEEQL  +F+  D DG+G +T  EL H+   LG   +       ++ AD+DGDG I+  E  K +  A
Subjt:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYA

AT3G03000.1 EF hand calcium-binding protein family1.3e-0735.62Show/hide
Query:  VLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYA
        V  P+T++QL  IF+  D+DG+G +T  EL H+   LG   ++      ++ AD DGDG I   E  + +  A
Subjt:  VLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYA

AT3G50770.1 calmodulin-like 413.0e-0735.38Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV
        ++E+L  +F   D DGDGK++  EL+H F  +G   S   A+EA+   D D DG++  ++   L+
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLV

AT5G12180.1 calcium-dependent protein kinase 178.7e-0735.44Show/hide
Query:  MGNSKSTTYRRVLVPFTEEQ---LADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDE
        M N K    R +    +EE+   L ++FK  D D  G +T EEL+      G+  S +  ++ + AADADG+GTI   E
Subjt:  MGNSKSTTYRRVLVPFTEEQ---LADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDE

AT5G42380.1 calmodulin like 373.0e-0737.31Show/hide
Query:  QLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKG
        +L  +F   D + DGK++ EEL+   + LG   SS   +E ++ +D DGDG I  +E  KL+E   G
Subjt:  QLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTACAACTTACAGACGAGTTTTGGTTCCATTCACAGAGGAGCAACTGGCCGACATTTTCAAGAGCCACGACCAAGACGGTGACGGGAAGCTGAC
AAAGGAGGAGTTGAAGCACGCCTTCAACTTTCTTGGTTCATGCTTCAGCTCCTTCAGAGCCAAAGAAGCTCTACGGGCCGCCGATGCTGACGGCGATGGCACCATCAGCA
TGGACGAGATGAAGAAGCTAGTTGAATATGCCAAAGGTCGTAAATACACTATTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTCCAAAAGTACAACTTACAGACGAGTTTTGGTTCCATTCACAGAGGAGCAACTGGCCGACATTTTCAAGAGCCACGACCAAGACGGTGACGGGAAGCTGAC
AAAGGAGGAGTTGAAGCACGCCTTCAACTTTCTTGGTTCATGCTTCAGCTCCTTCAGAGCCAAAGAAGCTCTACGGGCCGCCGATGCTGACGGCGATGGCACCATCAGCA
TGGACGAGATGAAGAAGCTAGTTGAATATGCCAAAGGTCGTAAATACACTATTTGTTAA
Protein sequenceShow/hide protein sequence
MGNSKSTTYRRVLVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRAADADGDGTISMDEMKKLVEYAKGRKYTIC