CuGenDBv2

Gene ID	Tan0000785
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG07:60734463..60734723
RNA-Seq Expression	Tan0000785
Synteny	Tan0000785
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

2.1e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

2.1e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

2.1e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]

1.4e-21

73.33

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        MVTAKEIM SLQA+FGQ  SS  +D +K+VYN RMKEG +VREH+LDMM HFN+ EVN AV+NEKSQV FIMESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]

4.2e-21

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        MV AKEIM SLQA+FGQ  SS  +D +KYVYN RMKEG +VREH+LDMM HFN+ EVNGAV+NEK+Q  FIMESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

1.0e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

A0A5A7TU93 Gag/pol protein

1.0e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

A0A5A7TWB9 Gag/pol protein

1.0e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

A0A5A7V4M1 Gag/pol protein

1.0e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

A0A5D3CPJ6 Gag/pol protein

1.0e-20

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Query:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL
        M+TA+EIM SLQ MFGQ    + +D +KY+YN+RM EGASVREH+L+MM HFNVAE+NGAVI+E SQV+FI+ESL
Subjt:  MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTCACCGCAAAGGAGATCATGGGATCATTACAAGCGATGTTTGGACAAACGTGCTCATCGGTCCATTATGATACTGTCAAATACGTTTACAACTCCCGTATGAAGGA
GGGAGCCTCTGTTAGGGAACATATCCTTGACATGATGACCCACTTCAACGTGGCTGAAGTAAATGGGGCAGTCATAAATGAGAAAAGTCAGGTAACCTTTATTATGGAAT
CTCTTAGAAGAGTTTCCTGCCATTCCGCACAAATGCGATGA

mRNA sequence

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Protein sequence

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MVTAKEIMGSLQAMFGQTCSSVHYDTVKYVYNSRMKEGASVREHILDMMTHFNVAEVNGAVINEKSQVTFIMESLRRVSCHSAQMR

Tan0000785 (gene) of Snake gourd v1 genome