| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S Q L GE+T+RVG+G +VS A+G ++L+ +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHS+LCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.9e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| A0A5A7TU93 Gag/pol protein | 1.0e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S Q L GE+T+RVG+G +VS A+G ++L+ +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHS+LCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| A0A5A7TWB9 Gag/pol protein | 2.9e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| A0A5A7V4M1 Gag/pol protein | 2.9e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| A0A5D3CPJ6 Gag/pol protein | 2.9e-134 | 56.15 | Show/hide |
Query: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
M EG+SVREHVL+MM HFN+AEMNGA IDE+SQVSFILE E F SN VMNKI+YTL TLLNELQ F+SL ++K + EANVA R +HRGSTSG
Subjt: MKEGSSVREHVLDMMTHFNLAEMNGASIDESSQVSFILEDSSEEFPSVSSNVVMNKISYTLATLLNELQNFQSLNRVK--ESEANVA--YRSYHRGSTSG
Query: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
TK + S + KG KK+ K+GK D A H
Subjt: TKPVAPS-------RPKG-------------------------------------------KKRMKRGKTD--------------------RAAPH--KG
Query: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
+GI+S + L GE+T+RVG+G +VS A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ S++F +K FI G ICSA LE+NLYVL+
Subjt: KKGINSLQPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKP
Query: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
+ K++LNTE+FKTA T+ K+ K+SPK+NAHLWHLRLGHINLNRIE+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+GKG+RAKEPLELVHSDLCGPM
Subjt: NSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPM
Query: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
NVKARGG+EYF++F +DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI SQLSA G PQ
Subjt: NVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.2e-21 | 29.09 | Show/hide |
Query: GELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKK
GE + G V+L + L D L+ NL+S+ L E +S+ F+ S IS G L V+K + + + + F+ K
Subjt: GELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKK
Query: AKVSPKDNAHLWHLRLGHIN------LNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRA--KEPLELVHSDLCGPMNVKARGGYEYFVS
K+N LWH R GHI+ + R LLN L E S +CE CL GK + PF + K PL +VHSD+CGP+ YFV
Subjt: AKVSPKDNAHLWHLRLGHIN------LNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRA--KEPLELVHSDLCGPMNVKARGGYEYFVS
Query: FIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
F++ ++ Y YL+ KS+ F+++ + E + + L D G EY+ E + + ++ GI L+ PQ
Subjt: FIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-29 | 30.43 | Show/hide |
Query: TLRVGSGELVSVAAIGTVKLHFG-GKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKT
T+++G+ +A IG + + G L+L ++ VP NL+S +L F + K ++ KG+L+ + K V L++T
Subjt: TLRVGSGELVSVAAIGTVKLHFG-GKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKT
Query: -AETRTKKAKVSPKD-NAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFV
AE + + + + LWH R+GH++ ++ L K L++ + ++ C+ CL GK + F R L+LV+SD+CGPM +++ GG +YFV
Subjt: -AETRTKKAKVSPKD-NAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFV
Query: SFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
+FI+D SR ++Y++ K + + F+++ VE + LK LRSD GGEY EF++Y HGI + + G PQ
Subjt: SFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 9.9e-15 | 25.47 | Show/hide |
Query: VSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKV
+ + AIG + +F P +L+S+S L Q I+ F + S G ++ + Y L S K ++ + + K K+K
Subjt: VSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKV
Query: SPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLP-------VCESCLEGKMTKRPFSGKGYRAK-----EPLELVHSDLCGPMNVKARGGYEYFV
K L H LGH N I+K +K + L+E+ + C CL GK TK KG R K EP + +H+D+ GP++ + YF+
Subjt: SPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELEENSLP-------VCESCLEGKMTKRPFSGKGYRAK-----EPLELVHSDLCGPMNVKARGGYEYFV
Query: SFIEDYSRYGYIYLMH--RKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGI
SF ++ +R+ ++Y +H R+ L F ++N + + ++ DRG EY + + GI
Subjt: SFIEDYSRYGYIYLMH--RKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-17 | 26.67 | Show/hide |
Query: DRAAPHKGKKGINSL---QPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSA
D A H N+L QP G+ + V G + ++ G+ L + L L N+ VP +NL+S+ L VS E A K
Subjt: DRAAPHKGKKGINSL---QPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSLIEQCISVSFESSKAFISFKGNLICSA
Query: SLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKRPFSGKGYRAKEP
L + +L+ K L +++ + A S K WH RLGH + + ++ + L+ L + C CL K K PFS + P
Subjt: SLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKRPFSGKGYRAKEP
Query: LELVHSDLCGPMNVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
LE ++SD+ + + Y Y+V F++ ++RY ++Y + +KS+ E F +K +EN + T SD GGE++ +Y +HGI S P+
Subjt: LELVHSDLCGPMNVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGEYMDTEFQDYMIEHGIPSQLSARGMPQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-16 | 25.77 | Show/hide |
Query: TKPVAPSRPKGKKRM------KRGKTDRAAPHKGKKGINSL---QPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSL
T P P +P+ + D A H N+L QP G+ + + G + + G+ L + L L+ + VP +NL+S+ L
Subjt: TKPVAPSRPKGKKRM------KRGKTDRAAPHKGKKGINSL---QPLREGEVTLRVGSGELVSVAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISSL
Query: IEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELE-ENSL
VS E A K L + +L+ K L +++ + A K WH RLGH +L + ++ + L L + L
Subjt: IEQCISVSFESSKAFISFKGNLICSASLEHNLYVLKPNSVKSVLNTELFKTAETRTKKAKVSPKDNAHLWHLRLGHINLNRIEKLVKSGLLNELE-ENSL
Query: PVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGE
C C K K PFS + +PLE ++SD+ + + Y Y+V F++ ++RY ++Y + +KS+ + F +K+ VEN + TL SD GGE
Subjt: PVCESCLEGKMTKRPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIEDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLDKSLKTLRSDRGGE
Query: YMDTEFQDYMIEHGIPSQLSARGMPQ
++ +DY+ +HGI S P+
Subjt: YMDTEFQDYMIEHGIPSQLSARGMPQ
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