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Tan0000845 (gene) of Snake gourd v1 genome

Gene IDTan0000845
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSHSP domain-containing protein
Genome locationLG11:8115375..8117857
RNA-Seq ExpressionTan0000845
SyntenyTan0000845
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]5.2e-2157.27Show/hide
Query:  MSSPSMRQSWRNVI-QSNQPFSPEKSWEEGND-GSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDH
        MSS  + Q WRNV+ Q NQ F P  ++EE  +      SMKL GFSKD+LRINLNTR++ ++VTG K+DG FN+TRLNER+ IKE C L+GV AKL +D 
Subjt:  MSSPSMRQSWRNVI-QSNQPFSPEKSWEEGND-GSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDH

Query:  TLTVTFPKNQ
        TL VTF K +
Subjt:  TLTVTFPKNQ
KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0752.24Show/hide
Query:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTD
        MSS  + Q WR+V +S+QPFSP+  W E  + S  LSMKL GF K++L+I LN  ++TL VTG K D
Subjt:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTD
KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0632.32Show/hide
Query:  WRNVIQSNQPFSPEKSW---EEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPK
        W  + Q  + + P   W   +E N    ++ +  +G S++QL+I+++   +T+ +   K +G+N+ R+NE I I+  CSLD V A  F ++ L +TFPK
Subjt:  WRNVIQSNQPFSPEKSW---EEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPK
KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2056.48Show/hide
Query:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL
        MSS  + Q WR+V +S+QPFSP+  W E  + S  LSMKL GF K++L+I LN  ++TL VTG K DG FN+ RLNERI I + CSLDGV A+L  DHTL
Subjt:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL

Query:  TVTFPKNQ
         VTF K +
Subjt:  TVTFPKNQ
XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]2.8e-1955.56Show/hide
Query:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL
        MSS  + Q W +V +S+QPFSP+  W E  + S  LSMKL GF K+QL+I LN  ++TL VTG K DG FN+ RLNERI I + CSLDGV A+L  D TL
Subjt:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL

Query:  TVTFPKNQ
         VTF K +
Subjt:  TVTFPKNQ
TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein2.5e-2157.27Show/hide
Query:  MSSPSMRQSWRNVI-QSNQPFSPEKSWEEGND-GSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDH
        MSS  + Q WRNV+ Q NQ F P  ++EE  +      SMKL GFSKD+LRINLNTR++ ++VTG K+DG FN+TRLNER+ IKE C L+GV AKL +D 
Subjt:  MSSPSMRQSWRNVI-QSNQPFSPEKSWEEGND-GSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDH

Query:  TLTVTFPKNQ
        TL VTF K +
Subjt:  TLTVTFPKNQ
A0A6J1FGX8 uncharacterized protein LOC1114452971.4e-1955.56Show/hide
Query:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL
        MSS  + Q W +V +S+QPFSP+  W E  + S  LSMKL GF K+QL+I LN  ++TL VTG K DG FN+ RLNERI I + CSLDGV A+L  D TL
Subjt:  MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDG-FNVTRLNERIQIKEACSLDGVSAKLFSDHTL

Query:  TVTFPKNQ
         VTF K +
Subjt:  TVTFPKNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04890.1 HSP20-like chaperones superfamily protein9.5e-0529.21Show/hide
Query:  QPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMK-TDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPK
        + F P+  W++  + +  L++ LTGF+K+Q+++     SK + VTG +       +R NE   + + C +D +    F ++ LT+T PK
Subjt:  QPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMK-TDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGTCCGAGTATGAGGCAAAGTTGGAGAAATGTAATTCAATCAAATCAGCCGTTTTCTCCAGAAAAAAGTTGGGAAGAAGGGAACGATGGCAGCCATAAGTTGAG
CATGAAACTCACAGGTTTTTCAAAGGATCAACTACGAATAAACTTGAATACAAGATCAAAGACTCTTATAGTTACGGGAATGAAAACAGATGGCTTCAATGTGACTCGTT
TAAATGAACGCATTCAAATTAAAGAAGCATGTTCATTAGATGGAGTCTCAGCAAAATTATTTTCTGATCATACTCTTACTGTTACATTCCCCAAAAACCAATAA
mRNA sequenceShow/hide mRNA sequence
GGCATATATAAAAGTAAAAGTGCTTCTTCTCTTGCATATAAATCATCACCAAAACTATAGCCATCTAAGTCATTATTTGGTGGTGAATTGAAGCGCTTTGAAGAAGTGAT
TTTGCCATTTTGTTCACGTTTTTTGAACAGAAGCGAAGAAAGATGTCGAGTCCGAGTATGAGGCAAAGTTGGAGAAATGTAATTCAATCAAATCAGCCGTTTTCTCCAGA
AAAAAGTTGGGAAGAAGGGAACGATGGCAGCCATAAGTTGAGCATGAAACTCACAGGTTTTTCAAAGGATCAACTACGAATAAACTTGAATACAAGATCAAAGACTCTTA
TAGTTACGGGAATGAAAACAGATGGCTTCAATGTGACTCGTTTAAATGAACGCATTCAAATTAAAGAAGCATGTTCATTAGATGGAGTCTCAGCAAAATTATTTTCTGAT
CATACTCTTACTGTTACATTCCCCAAAAACCAATAAATTAAATTAATCTTCATTTTATTTCTATCCAAATCAAAAAATTTACTTTGTTTAAATTAGTGAATAAATATCAA
CTTCTATATATGTGAGTTGGTGTATAAATTTGTTTTCTAAAGTTGTAATCAAATTGTGGGTAAAGGATCGATATCGATCAATGATGTTATATTGTGTACCAATGAAACCA
CGTTATCTAATATTATCAATCGACTCGTGTGGTTGTGTTTGTGGAATGAAGAAAAACCTATATTTGTTTGTTGTTTTTGAAATTGGTCACGCGAGATTTAATTTTACTTG
AACAAATAATAGTATTGTGTATTTGTTTGTTATGAATAAAGTGAACCTTTATATATCTCTACATGCGAGAAACTATTTGTTGAAACTTTTCTTTGGGAATCGAAGGGTGC
TTTTGATTGGGGATTCAAAAACAGAATTTTGAAAACAATAGATTTAATGGAAAAAAAAAAAGATATGGTTGTGTTTTATATGTTTCATTGTTTTTTTTAATGTATGTATT
TAGTGGTAGATTTTGAATCGGAAAACAAATAGAAACATATAGATGTTTTTTTCTTTTTTTCTTTTTTGTCAAAGAGAGCATAGTTTAATTGACATCTCGAATGTATTAAT
GAGTAATGAC
Protein sequenceShow/hide protein sequence
MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPKNQ