CuGenDBv2

Gene ID	Tan0000894
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG04:57261278..57262456
RNA-Seq Expression	Tan0000894
Synteny	Tan0000894
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]

9.8e-132

65.98

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI   QEQKVC+L R +  L                              +KI    VAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+HLSKEQ PKTPQ VEDMRRIPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VK +LKYLRRTR+YMLVYGAKDLIL GYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ
        KF+ +LEV PNM LP+ LYCDNSGA ANS+EPRSHKRGKHIERKYHLI EIV RG +IVTKIASEHN+ DPF K LTA+VFE HLE LGL+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]

3.7e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

3.7e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

9.8e-132

65.98

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI   QEQKVC+L R +  L                              +KI    VAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+HLSKEQ PKTPQ VEDMRRIPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VK +LKYLRRTR+YMLVYGAKDLIL GYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ
        KF+ +LEV PNM LP+ LYCDNSGA ANS+EPRSHKRGKHIERKYHLI EIV RG +IVTKIASEHN+ DPF K LTA+VFE HLE LGL+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]

3.7e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

1.8e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

A0A5A7TZD0 Gag/pol protein

4.7e-132

65.98

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI   QEQKVC+L R +  L                              +KI    VAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+HLSKEQ PKTPQ VEDMRRIPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VK +LKYLRRTR+YMLVYGAKDLIL GYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ
        KF+ +LEV PNM LP+ LYCDNSGA ANS+EPRSHKRGKHIERKYHLI EIV RG +IVTKIASEHN+ DPF K LTA+VFE HLE LGL+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ

A0A5A7UYE8 Gag/pol protein

4.7e-132

65.98

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI   QEQKVC+L R +  L                              +KI    VAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I+R+RKNKTLALSQA+YIDK+L R+ MQ+SKKGLLPFRHG+HLSKEQ PKTPQ VEDMRRIPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VK +LKYLRRTR+YMLVYGAKDLIL GYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ
        KF+ +LEV PNM LP+ LYCDNSGA ANS+EPRSHKRGKHIERKYHLI EIV RG +IVTKIASEHN+ DPF K LTA+VFE HLE LGL+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQ

A0A5D3BHG7 Gag/pol protein

1.8e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

A0A5D3CPJ6 Gag/pol protein

1.8e-131

64.3

Show/hide

Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------
        M QP+GFI P QEQK+C+L R +  L                              ++IIN SVAFL+LYVDDILLI ND                    
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL------------------------------EKIINSSVAFLILYVDDILLIEND--------------------

Query:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---
                  I R+RKNK LALSQASYIDK++ ++ MQ+SK+GLLPFRHG+ LSKEQCPKTPQ VE+MR IPY SAVGSLMYAMLCTRPDIC+AVG+   
Subjt:  ----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGM---

Query:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR
                  T VKTILKYLRRTR+Y LVYG+KDLIL GYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRS+KQGCIADSTMEAEYVAACEA KEAVWLR
Subjt:  ----------TTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLR

Query:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN
         F+++LEV PNM+ P+ LYCDNSGA ANSREPRSHKRGKHIERKYHLI EIVHRG +IVT+IAS HNV DPF K LTA+VFE HLE LGL+  P+
Subjt:  KFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

7.5e-34

30.56

Show/hide

Query:  INSSVAFLILYVDDILLIENDIVRNRKNK----------------------------TLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHL----SKEQ
        IN ++ +++LYVDD+++   D+ R    K                             + LSQ++Y+ K+LS+F M++      P    I+     S E 
Subjt:  INSSVAFLILYVDDILLIENDIVRNRKNK----------------------------TLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHL----SKEQ

Query:  CPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT-------------VKTILKYLRRTRNYMLVYG---AKDLILIGYTDSDFQTDKDSRKS
        C             P  S +G LMY MLCTRPD+  AV + +             +K +L+YL+ T +  L++    A +  +IGY DSD+   +  RKS
Subjt:  CPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT-------------VKTILKYLRRTRNYMLVYG---AKDLILIGYTDSDFQTDKDSRKS

Query:  TSGSVFTL-NGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLRKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVH
        T+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+  + ++ +   +  P+K+Y DN G  + +  P  HKR KHI+ KYH   E V 
Subjt:  TSGSVFTL-NGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWLRKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVH

Query:  RGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGL
          V+ +  I +E+ + D F K L A  F    + LGL
Subjt:  RGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGL

P0CV72 Secreted RxLR effector protein 161

2.7e-23

45.86

Show/hide

Query:  MRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT-------------VKTILKYLRRTRNYMLVY-GAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGA
        M+ +PY SAVG++MY M+ TRPD+  AVG+ +             +K +L+YL+ T+ Y L +  A    L+GY+D+D+  D +SR+STSG +F LNGG 
Subjt:  MRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT-------------VKTILKYLRRTRNYMLVY-GAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGA

Query:  VVWRSVKQGCIADSTMEAEYVAACEANKEAVWL
        V WRS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVWRSVKQGCIADSTMEAEYVAACEANKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.3e-54

34.78

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Query:  MDQPKGFIEPRQEQKVCRLKRMMMNL-------------------------------EKIINSSVAFLILYVDDILLIEND-------------------
        M+QP+GF    ++  VC+L + +  L                               ++   ++   L+LYVDD+L++  D                   
Subjt:  MDQPKGFIEPRQEQKVCRLKRMMMNL-------------------------------EKIINSSVAFLILYVDDILLIEND-------------------

Query:  -----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT
                   IVR R ++ L LSQ  YI++VL RF M+++K    P    + LSK+ CP T +   +M ++PY SAVGSLMYAM+CTRPDI  AVG+ +
Subjt:  -----------IVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRRIPYDSAVGSLMYAMLCTRPDICFAVGMTT

Query:  -------------VKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWL
                     VK IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL
Subjt:  -------------VKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEANKEAVWL

Query:  RKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGL
        ++F+  L +     +   +YCD+  A   S+    H R KHI+ +YH I E+V    + V KI++  N  D   K +    FE   E +G+
Subjt:  RKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGL

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.2e-17

33.52

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Query:  YDSAVGSLMYAMLCTRPDICFAVG-------------MTTVKTILKYLRRTRNYMLVYGAK-DLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS
        Y   +G LMY  + TR DI FAV                 V  IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S
Subjt:  YDSAVGSLMYAMLCTRPDICFAVG-------------MTTVKTILKYLRRTRNYMLVYGAK-DLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS

Query:  VKQGCIADSTMEAEYVAACEANKEAVWLRKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWE
         KQ  ++ S+ EAEY A   A  E +WL +F   L++   ++ P  L+CDN+ A   +     H+R KHIE   H + E
Subjt:  VKQGCIADSTMEAEYVAACEANKEAVWLRKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWE

Sequences

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CDS sequence

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ATGGACCAACCCAAAGGGTTCATTGAACCAAGACAAGAGCAAAAGGTTTGCAGGCTTAAAAGAATGATGATGAACCTTGAGAAAATCATCAATAGTTCTGTCGCATTCCT
AATTCTCTATGTGGATGATATCCTACTCATTGAGAATGATATTGTCCGGAATCGCAAGAATAAAACACTAGCCTTGTCTCAAGCATCTTACATAGACAAAGTGTTGTCAA
GGTTTAAGATGCAAGATTCCAAAAAGGGCTTGTTGCCTTTTAGACATGGAATCCATTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGGAGTTGAGGATATGAGACGG
ATTCCTTACGATTCGGCTGTTGGGAGCCTGATGTACGCCATGTTGTGTACTAGGCCCGACATCTGTTTTGCAGTTGGGATGACAACGGTTAAAACAATCCTTAAGTATCT
TCGGAGAACAAGGAACTACATGCTCGTGTATGGGGCTAAGGATTTGATTCTTATAGGATACACGGATTCTGACTTTCAGACTGATAAAGATTCTCGAAAATCTACATCAG
GGTCAGTATTCACTCTTAACGGAGGAGCTGTAGTATGGCGAAGCGTCAAGCAAGGATGCATCGCTGATTCCACCATGGAGGCCGAGTATGTAGCGGCTTGTGAAGCAAAT
AAGGAGGCCGTTTGGTTAAGAAAATTCATGCTAAATTTGGAAGTTTTTCCAAATATGACTTTGCCCATGAAGCTGTATTGCGATAACAGTGGTGCAGAAGCAAATTCAAG
GGAACCTCGAAGTCACAAGAGGGGAAAGCACATAGAGCGAAAGTATCATCTCATCTGGGAGATCGTGCATAGAGGAGTCATGATTGTCACGAAGATAGCCTCAGAGCACA
ACGTTGTTGATCCTTTTAGAAAGGCTCTCACGGCTAGAGTATTTGAGAGTCACCTAGAAGGTCTAGGTTTACAAGTCTTCCCCAACTAG

mRNA sequence

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Protein sequence

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MDQPKGFIEPRQEQKVCRLKRMMMNLEKIINSSVAFLILYVDDILLIENDIVRNRKNKTLALSQASYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQGVEDMRR
IPYDSAVGSLMYAMLCTRPDICFAVGMTTVKTILKYLRRTRNYMLVYGAKDLILIGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSVKQGCIADSTMEAEYVAACEAN
KEAVWLRKFMLNLEVFPNMTLPMKLYCDNSGAEANSREPRSHKRGKHIERKYHLIWEIVHRGVMIVTKIASEHNVVDPFRKALTARVFESHLEGLGLQVFPN

Tan0000894 (gene) of Snake gourd v1 genome