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Tan0000934 (gene) of Snake gourd v1 genome

Gene IDTan0000934
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEthylene-responsive transcription factor
Genome locationLG06:10409854..10410535
RNA-Seq ExpressionTan0000934
SyntenyTan0000934
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5560331.1 hypothetical protein RHGRI_003581 [Rhododendron griersonianum]1.0e-3161.65Show/hide
Query:  EIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP---------------LMSVSSSESQSTS
        E +GGD+ VKYRGVRRRPWGKFAAEIRDSAR G R+WLGTF TAEEAARAYDRAA+ MRGQLA LNFPEEYP                +S SSS S    
Subjt:  EIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP---------------LMSVSSSESQSTS

Query:  LRNDETERKEEFVFEFECLDEKLLDELLDFDKD
          N      +  VFEFECLD+KLL+ELL+ D++
Subjt:  LRNDETERKEEFVFEFECLDEKLLDELLDFDKD

PON62613.1 AP2/ERF transcription factor [Parasponia andersonii]7.0e-3368.64Show/hide
Query:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-----MSVSSSESQSTSLRNDETERKEEFVF
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL      + SS+ S S++ RN ET+++ E VF
Subjt:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-----MSVSSSESQSTSLRNDETERKEEFVF

Query:  EFECLDEKLLDELLDFDK
        EFE LD+KLLDELLDF+K
Subjt:  EFECLDEKLLDELLDFDK

PON81721.1 AP2/ERF transcription factor [Trema orientale]2.1e-3265.08Show/hide
Query:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MSVSSSESQSTSLRNDET
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL              S SS+ S S++ RN ET
Subjt:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MSVSSSESQSTSLRNDET

Query:  ERKEEFVFEFECLDEKLLDELLDFDK
        +++ E VFEFE LD+KLLDELLDF+K
Subjt:  ERKEEFVFEFECLDEKLLDELLDFDK

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]6.4e-3468.85Show/hide
Query:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +SV           SSS S S+++RN ET+++
Subjt:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK

Query:  EEFVFEFECLDEKLLDELLDFD
        E  VFEFE LD+KLLDELLDFD
Subjt:  EEFVFEFECLDEKLLDELLDFD

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]8.3e-5080.29Show/hide
Query:  MDDRRQRAPEID---------GGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQ
        M+D RQR PEI+         GG+R VKYRGVRRRPWGKFAAEIRDS RRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM VSS ESQ
Subjt:  MDDRRQRAPEID---------GGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQ

Query:  STSLRNDETERKEEFVFEFECLDEKLLDELLDFDKDM
        S+SL+NDETERKEE V EFECLDE LLDELLDF K++
Subjt:  STSLRNDETERKEEFVFEFECLDEKLLDELLDFDKDM

TrEMBL top hitse value%identityAlignment
A0A2P5CNI8 AP2/ERF transcription factor3.4e-3368.64Show/hide
Query:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-----MSVSSSESQSTSLRNDETERKEEFVF
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL      + SS+ S S++ RN ET+++ E VF
Subjt:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-----MSVSSSESQSTSLRNDETERKEEFVF

Query:  EFECLDEKLLDELLDFDK
        EFE LD+KLLDELLDF+K
Subjt:  EFECLDEKLLDELLDFDK

A0A2P5E849 AP2/ERF transcription factor9.9e-3365.08Show/hide
Query:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MSVSSSESQSTSLRNDET
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL              S SS+ S S++ RN ET
Subjt:  GDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL-------------MSVSSSESQSTSLRNDET

Query:  ERKEEFVFEFECLDEKLLDELLDFDK
        +++ E VFEFE LD+KLLDELLDF+K
Subjt:  ERKEEFVFEFECLDEKLLDELLDFDK

A0A5A7U6W8 Ethylene-responsive transcription factor ERF0965.4e-3159.09Show/hide
Query:  RQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL---------MSVSSSESQSTSL
        R    ++ GG R ++YRGVRRRPWGKFAAEIRDS R+GVRIWLGTF TAEEAARAYDRAA+ MRG LA LNFP EYPL          S  SS S S S+
Subjt:  RQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL---------MSVSSSESQSTSL

Query:  RNDETERKEEFVFEFECLDEKLLDELLDFDKD
        R +E       V EFE LD+K+L++LLD+ ++
Subjt:  RNDETERKEEFVFEFECLDEKLLDELLDFDKD

A0A7J6GXW5 AP2/ERF domain-containing protein3.1e-3468.85Show/hide
Query:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +SV           SSS S S+++RN ET+++
Subjt:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK

Query:  EEFVFEFECLDEKLLDELLDFD
        E  VFEFE LD+KLLDELLDFD
Subjt:  EEFVFEFECLDEKLLDELLDFD

A0A803PGP0 Uncharacterized protein3.1e-3468.85Show/hide
Query:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +SV           SSS S S+++RN ET+++
Subjt:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSV-----------SSSESQSTSLRNDETERK

Query:  EEFVFEFECLDEKLLDELLDFD
        E  VFEFE LD+KLLDELLDFD
Subjt:  EEFVFEFECLDEKLLDELLDFD

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI52.4e-2361.54Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVS------SSESQSTSLRND----ETERKEEFVF
        KYRGVRRRPWGK+AAEIRDSAR G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E    SVS       S S +T+  +D    E       VF
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVS------SSESQSTSLRND----ETERKEEFVF

Query:  EFEC
        E  C
Subjt:  EFEC

P93822 Ethylene-responsive transcription factor 141.9e-2853.54Show/hide
Query:  MDDRRQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQSTSLRNDET
        MD   + +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY + + SSS + ++S  + + 
Subjt:  MDDRRQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQSTSLRNDET

Query:  ERKEEFVFEFECLDEKLLDELLDFDKD
              VFEFE LD+ +LDELL++ ++
Subjt:  ERKEEFVFEFECLDEKLLDELLDFDKD

Q9LSX0 Ethylene-responsive transcription factor ERF0963.5e-2758.33Show/hide
Query:  IDGGDRSV-----KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-VSSSESQS-TSLRNDETERK
        +D G R V     KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + S VSSS + + +S  +      
Subjt:  IDGGDRSV-----KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-VSSSESQS-TSLRNDETERK

Query:  EEFVFEFECLDEKLLDELLD
           VFEFE LD+ +L+ELL+
Subjt:  EEFVFEFECLDEKLLDELLD

Q9LTC5 Ethylene-responsive transcription factor ERF0981.5e-3058.2Show/hide
Query:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMSVSSSESQSTSLRNDETERKE
        D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P  + SSS S S S   + + + +
Subjt:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMSVSSSESQSTSLRNDETERKE

Query:  EFVFEFECLDEKLLDELLDFDK
          VFEFE LD+K+L+ELLD ++
Subjt:  EFVFEFECLDEKLLDELLDFDK

Q9LTC6 Ethylene-responsive transcription factor ERF0952.7e-2758.77Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-------VSSSESQSTSLRNDETERKEEFVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M         ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-------VSSSESQSTSLRNDETERKEEFVFEF

Query:  ECLDEKLLDELLDF
        E LD+ LL+ELLD+
Subjt:  ECLDEKLLDELLDF

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 141.3e-2953.54Show/hide
Query:  MDDRRQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQSTSLRNDET
        MD   + +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY + + SSS + ++S  + + 
Subjt:  MDDRRQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQSTSLRNDET

Query:  ERKEEFVFEFECLDEKLLDELLDFDKD
              VFEFE LD+ +LDELL++ ++
Subjt:  ERKEEFVFEFECLDEKLLDELLDFDKD

AT2G31230.1 ethylene-responsive element binding factor 152.7e-2264.1Show/hide
Query:  GGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSES
        G D    YRGVR+RPWGKFAAEIRDS R G+R+WLGTF+ AEEAA AYD+AAF  +G LATLNFP E    S+   E+
Subjt:  GGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSES

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.9e-2858.77Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-------VSSSESQSTSLRNDETERKEEFVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M         ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-------VSSSESQSTSLRNDETERKEEFVFEF

Query:  ECLDEKLLDELLDF
        E LD+ LL+ELLD+
Subjt:  ECLDEKLLDELLDF

AT3G23230.1 Integrase-type DNA-binding superfamily protein1.1e-3158.2Show/hide
Query:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMSVSSSESQSTSLRNDETERKE
        D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P  + SSS S S S   + + + +
Subjt:  DRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMSVSSSESQSTSLRNDETERKE

Query:  EFVFEFECLDEKLLDELLDFDK
          VFEFE LD+K+L+ELLD ++
Subjt:  EFVFEFECLDEKLLDELLDFDK

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.5e-2858.33Show/hide
Query:  IDGGDRSV-----KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-VSSSESQS-TSLRNDETERK
        +D G R V     KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + S VSSS + + +S  +      
Subjt:  IDGGDRSV-----KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMS-VSSSESQS-TSLRNDETERK

Query:  EEFVFEFECLDEKLLDELLD
           VFEFE LD+ +L+ELL+
Subjt:  EEFVFEFECLDEKLLDELLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATCGCCGCCAGAGAGCACCGGAGATCGACGGCGGAGATAGGAGTGTGAAGTACAGGGGAGTACGGCGGCGACCGTGGGGGAAGTTCGCGGCGGAGATTCGGGA
CTCGGCGCGGCGAGGGGTTCGGATTTGGCTGGGGACTTTCGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCGTTCCGCATGAGAGGTCAATTGGCCACTC
TGAATTTTCCGGAGGAGTATCCATTGATGAGCGTTTCAAGCTCTGAATCTCAATCGACTTCGTTGCGAAATGATGAAACAGAGAGAAAAGAGGAATTTGTTTTTGAATTT
GAGTGTTTGGATGAGAAACTGTTGGATGAGCTTCTTGACTTTGACAAGGATATGTAG
mRNA sequenceShow/hide mRNA sequence
CCAATCATCATCCCTCAATTCCACATTCATTGTACTCACTAAAATCAAACACAAATCCATCAATTCAATACATCACGTTGCACGAAACTGTTTACTCCATGGCGGCATTT
TCATCAAATCGCTCACGTATATATACAAATCAAACGATTGCAAAGACATTGGGAATTAGGGCACAAATACCGAAATGGACGATCGCCGCCAGAGAGCACCGGAGATCGAC
GGCGGAGATAGGAGTGTGAAGTACAGGGGAGTACGGCGGCGACCGTGGGGGAAGTTCGCGGCGGAGATTCGGGACTCGGCGCGGCGAGGGGTTCGGATTTGGCTGGGGAC
TTTCGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCGTTCCGCATGAGAGGTCAATTGGCCACTCTGAATTTTCCGGAGGAGTATCCATTGATGAGCGTTT
CAAGCTCTGAATCTCAATCGACTTCGTTGCGAAATGATGAAACAGAGAGAAAAGAGGAATTTGTTTTTGAATTTGAGTGTTTGGATGAGAAACTGTTGGATGAGCTTCTT
GACTTTGACAAGGATATGTAGGGGCATATTGGTAATTTAAGTTAAATAGAGGTCCTATTTTCGTCATGAATTTTCGTACTTATTTTGTTTTCAAACTTTGGATTTAGTTT
CTATTTTAGTCCTTACCGTGCA
Protein sequenceShow/hide protein sequence
MDDRRQRAPEIDGGDRSVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMSVSSSESQSTSLRNDETERKEEFVFEF
ECLDEKLLDELLDFDKDM