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Tan0000941 (gene) of Snake gourd v1 genome

Gene IDTan0000941
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:65314513..65317764
RNA-Seq ExpressionTan0000941
SyntenyTan0000941
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]8.8e-0740.35Show/hide
Query:  KCVFIRYGGVWEEDTCTYTGGHMTSIVVPSTITYKEFRSEIYNVTSIDEHSYEIEMR
        K +FIR+GG WE++T +Y GG +  I+VP T+TYKE ++ ++ +  +D++ Y++ +R
Subjt:  KCVFIRYGGVWEEDTCTYTGGHMTSIVVPSTITYKEFRSEIYNVTSIDEHSYEIEMR
XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]4.4e-0636.17Show/hide
Query:  MDNKCVFIRYGGVWEEDTCTYTGGHMTSIVVPSTITYKEFRSEIYNVTSIDEHSYEIEMRKQLVTNGGESNEDTGEDLEYNPLHEEESDEVVKF
        M  KCV  RYG  W+E+   Y GG +T IVVP T+ YKEF++ IY V +++   +++ MR +              D E  PL+ +  D+V  F
Subjt:  MDNKCVFIRYGGVWEEDTCTYTGGHMTSIVVPSTITYKEFRSEIYNVTSIDEHSYEIEMRKQLVTNGGESNEDTGEDLEYNPLHEEESDEVVKF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACAAGTGTGTTTTCATTAGGTATGGCGGTGTATGGGAAGAGGATACATGTACTTATACCGGAGGTCATATGACCAGTATCGTTGTGCCATCAACGATAACATA
CAAAGAATTTCGGTCGGAGATTTATAATGTTACGTCTATAGACGAGCATTCTTATGAAATTGAAATGAGGAAACAACTCGTCACTAACGGTGGAGAATCTAATGAAGATA
CAGGTGAGGACCTAGAGTACAACCCTTTGCACGAAGAAGAAAGCGATGAGGTTGTGAAATTCGAAGAAGATGAAGAGGAATACGAGGATGAAGATGCAAAGGAATATGAG
GTTGTGGAATTCGAAGAAGATGAAGAAGAATACGCGGATGAAGAGGAATACGAGGATGAAGATATGCTATATGACGACGAGTACGAGAAAGATATATCGGGTGAATCGAA
AGACGAAGAAGAATGTAGAGACGATGGATACGTTCCAAATGATGGGCTTCATTTCGGTAACGTACTGGATACAAACTGGTTTGGGTCGTTCGATAACTTAAATATATTCC
AAGTGACGCAGTGTGACTTAAACCCTACTGTGGATGTAGTCAACCAATTTATAGGAGGTGACTTGCACGAGTGGGGTGATTACTCAAGTCTCAATGTCGATATACACGAT
GCCCAACCCAGCTCACAACCCCAAGATTACATAATAGTAGAGAAGAGTGACGACATTAAGTTGGTGAGCCACGGGCCAAGTAGCCGTTTCGGTATGTCAACCGAACAATG
TGGCAGAAATGGTACAATAGGTCCATCCGCTTCGGTAAATTTCGGAAGAACAGGCGACATCGTACTCCAAGGGGCAGATGGTAGAGATATGGTTGCCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACAAGTGTGTTTTCATTAGGTATGGCGGTGTATGGGAAGAGGATACATGTACTTATACCGGAGGTCATATGACCAGTATCGTTGTGCCATCAACGATAACATA
CAAAGAATTTCGGTCGGAGATTTATAATGTTACGTCTATAGACGAGCATTCTTATGAAATTGAAATGAGGAAACAACTCGTCACTAACGGTGGAGAATCTAATGAAGATA
CAGGTGAGGACCTAGAGTACAACCCTTTGCACGAAGAAGAAAGCGATGAGGTTGTGAAATTCGAAGAAGATGAAGAGGAATACGAGGATGAAGATGCAAAGGAATATGAG
GTTGTGGAATTCGAAGAAGATGAAGAAGAATACGCGGATGAAGAGGAATACGAGGATGAAGATATGCTATATGACGACGAGTACGAGAAAGATATATCGGGTGAATCGAA
AGACGAAGAAGAATGTAGAGACGATGGATACGTTCCAAATGATGGGCTTCATTTCGGTAACGTACTGGATACAAACTGGTTTGGGTCGTTCGATAACTTAAATATATTCC
AAGTGACGCAGTGTGACTTAAACCCTACTGTGGATGTAGTCAACCAATTTATAGGAGGTGACTTGCACGAGTGGGGTGATTACTCAAGTCTCAATGTCGATATACACGAT
GCCCAACCCAGCTCACAACCCCAAGATTACATAATAGTAGAGAAGAGTGACGACATTAAGTTGGTGAGCCACGGGCCAAGTAGCCGTTTCGGTATGTCAACCGAACAATG
TGGCAGAAATGGTACAATAGGTCCATCCGCTTCGGTAAATTTCGGAAGAACAGGCGACATCGTACTCCAAGGGGCAGATGGTAGAGATATGGTTGCCCGTTAA
Protein sequenceShow/hide protein sequence
MDNKCVFIRYGGVWEEDTCTYTGGHMTSIVVPSTITYKEFRSEIYNVTSIDEHSYEIEMRKQLVTNGGESNEDTGEDLEYNPLHEEESDEVVKFEEDEEEYEDEDAKEYE
VVEFEEDEEEYADEEEYEDEDMLYDDEYEKDISGESKDEEECRDDGYVPNDGLHFGNVLDTNWFGSFDNLNIFQVTQCDLNPTVDVVNQFIGGDLHEWGDYSSLNVDIHD
AQPSSQPQDYIIVEKSDDIKLVSHGPSSRFGMSTEQCGRNGTIGPSASVNFGRTGDIVLQGADGRDMVAR