CuGenDBv2

Gene ID	Tan0000957
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L2, chloroplastic
Genome location	LG01:45292730..45295849
RNA-Seq Expression	Tan0000957
Synteny	Tan0000957
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009536 - plastid (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002171 - Ribosomal protein L2 IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR014726 - Ribosomal protein L2, domain 3 IPR022666 - Ribosomal Proteins L2, RNA binding domain IPR022669 - Ribosomal protein L2, C-terminal IPR022671 - Ribosomal protein L2, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CUR03841.1 rpl2 [Acacia kochii]

4.0e-86

67.7

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQ AR            GKS TLKLPSGEVRLISKNCS  +G VGNVGVN+
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLV-EKTRNPLGLSCIWKKK
        KSLGR GSKCWLGKCP+VRG+VMNP+++PHGVVKGG QLV +KT N L LS  WKKK
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLV-EKTRNPLGLSCIWKKK

P21434.1 RecName: Full=50S ribosomal protein L2, chloroplastic [Nicotiana debneyi]

5.3e-83

68.67

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNG VD                     RN RGIITA HRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVR ISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL
        KSLGR GSK WLGK PVVRG+VMNPVD+P GVVKG PQLVEK   PLG+
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL

QQO80911.1 ribosomal protein L2 [Prunus persica]

2.3e-86

70.04

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Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKS
        LHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQKS
Subjt:  LHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKS

Query:  LGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL
        LG+ GSKCWLGK PVVRG+VMNPVD+PHG  +GGPQLVEK   PLG+
Subjt:  LGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL

QSX28335.1 ribosomal protein L2 [Julbernardia paniculata]

5.3e-83

66.8

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRG-------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                   ESTSTDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRG-------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        KSLG+ GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

YP_009744727.1 ribosomal protein L2 [Prunus triloba]

2.6e-82

65.89

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Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV
        LHPRG                       +STSTDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGV
Subjt:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV

Query:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        NQKSLG+ GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

TrEMBL top hits

e value

%identity

Alignment

A0A1D0BZQ0 Rpl2 protein

1.9e-86

67.7

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQ AR            GKS TLKLPSGEVRLISKNCS  +G VGNVGVN+
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLV-EKTRNPLGLSCIWKKK
        KSLGR GSKCWLGKCP+VRG+VMNP+++PHGVVKGG QLV +KT N L LS  WKKK
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLV-EKTRNPLGLSCIWKKK

A0A6B9IP68 50S ribosomal protein L2, chloroplastic

1.3e-82

65.89

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV
        LHPRG                       +STSTDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGV
Subjt:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV

Query:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        NQKSLG+ GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

A0A6B9IR60 50S ribosomal protein L2, chloroplastic

1.3e-82

65.89

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Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV
        LHPRG                       +STSTDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGV
Subjt:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV

Query:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        NQKSLG+ GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

A0A6G6YB72 50S ribosomal protein L2, chloroplastic

1.3e-82

65.89

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV
        LHPRG                       +STSTDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGV
Subjt:  LHPRG-----------------------ESTSTDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGV

Query:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        NQKSLG+ GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  NQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

A0A7T8IMF6 Ribosomal protein L2

1.1e-86

70.04

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI
        MAIHLYKTSTPSTRNGAVD                   RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+RYI
Subjt:  MAIHLYKTSTPSTRNGAVDC------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYI

Query:  LHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKS
        LHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQKS
Subjt:  LHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKS

Query:  LGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL
        LG+ GSKCWLGK PVVRG+VMNPVD+PHG  +GGPQLVEK   PLG+
Subjt:  LGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL

SwissProt top hits

e value

%identity

Alignment

P18663 50S ribosomal protein L2-A, chloroplastic

1.6e-82

64.45

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+K+IYGRIVTIEYD NRNAYICLIHYGDGE++
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        K+LGR GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

P21434 50S ribosomal protein L2, chloroplastic

7.0e-86

68.67

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNG VD                     RN RGIITA HRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVR ISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL
        KSLGR GSK WLGK PVVRG+VMNPVD+P GVVKG PQLVEK   PLG+
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGL

Q09MB2 50S ribosomal protein L2, chloroplastic

1.6e-82

69.36

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVG NQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG
        KSLGR GSKCWLGK PVVRG+VMNPVD+PHG  +G
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG

Q0ZIX7 50S ribosomal protein L2, chloroplastic

9.5e-83

65.23

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRN AVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        KSLGR GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

Q4VZK5 50S ribosomal protein L2, chloroplastic

3.3e-83

65.23

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITAGHRGGGHKRLY KIDFRRN+KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLGKGGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGN GVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK
        KSLGR GSKCWLGK PVVRG+VMNPVD+PHG  +G  P   +K   P G   + ++
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG-GPQLVEKTRNPLGLSCIWKK

Arabidopsis top hits

e value

%identity

Alignment

AT2G44065.1 Ribosomal protein L2 family

1.7e-15

39.42

Show/hide

Query:  MPLGTTIHNIEITLGKGGQLARGKSTT-------------LKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHG
        M +GT IHNIE+  G+G ++ R   T              +KLPSG+ + I+  C  T+G V N     K L + G   WLG  P VRG+ MNP D+PHG
Subjt:  MPLGTTIHNIEITLGKGGQLARGKSTT-------------LKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHG

Query:  VVKG
          +G
Subjt:  VVKG

AT2G44065.2 Ribosomal protein L2 family

1.7e-15

39.42

Show/hide

Query:  MPLGTTIHNIEITLGKGGQLARGKSTT-------------LKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHG
        M +GT IHNIE+  G+G ++ R   T              +KLPSG+ + I+  C  T+G V N     K L + G   WLG  P VRG+ MNP D+PHG
Subjt:  MPLGTTIHNIEITLGKGGQLARGKSTT-------------LKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHG

Query:  VVKG
          +G
Subjt:  VVKG

AT3G51190.1 Ribosomal protein L2 family

5.8e-11

34.55

Show/hide

Query:  MPLGTTIHNIEITLGKGGQLAR--------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGS---------KCWLGKCPVVRGI
        +P G  I N+E+ +G  G LAR                +T +KLPSG  +++   C   +GQV   G  +K L + G+          CW    PVVRG+
Subjt:  MPLGTTIHNIEITLGKGGQLAR--------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGS---------KCWLGKCPVVRGI

Query:  VMNPVDYPHG
         MNPV++PHG
Subjt:  VMNPVDYPHG

ATCG00830.1 ribosomal protein L2

1.3e-82

68.94

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITA HRGGGHKRLY KIDFRRN KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLG+GGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG
        KSLGR GSKCWLGK PVVRG+VMNPVD+PHG  +G
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG

ATCG01310.1 ribosomal protein L2

1.3e-82

68.94

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR
        MAIHLYKTSTPSTRNGAVD                     RN RGIITA HRGGGHKRLY KIDFRRN KDIYGRIVTIEYD NRNAYICLIHYGDGE+R
Subjt:  MAIHLYKTSTPSTRNGAVDC--------------------RNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERR

Query:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ
        YILHPRG                       TDMPLGT IHNIEITLG+GGQLAR            GKS TLKLPSGEVRLISKNCS TVGQVGNVGVNQ
Subjt:  YILHPRGESTS-------------------TDMPLGTTIHNIEITLGKGGQLAR------------GKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQ

Query:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG
        KSLGR GSKCWLGK PVVRG+VMNPVD+PHG  +G
Subjt:  KSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKG

Sequences

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CDS sequence

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ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACTGTCGTAATACCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAA
GCGTCTATACCATAAAATCGATTTTCGACGGAATAAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCTTAATCGAAATGCATACATTTGTCTTATACACT
ATGGGGATGGTGAGAGAAGATATATTTTACATCCCAGAGGGGAATCTACTTCAACCGACATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGG
GGACAATTAGCTAGAGGGAAATCGACCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAACAACGGTCGGACAAGTGGGGAATGTTGGAGT
AAACCAGAAAAGTTTGGGTAGAGTCGGATCTAAGTGTTGGCTAGGTAAGTGTCCTGTAGTAAGAGGAATAGTTATGAACCCTGTAGACTATCCCCATGGGGTGGTGAAGG
GAGGGCCCCAATTGGTAGAAAAAACCCGTAACCCCTTGGGGTTGTCCTGCATTTGGAAGAAGAAGTAG

mRNA sequence

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Protein sequence

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MAIHLYKTSTPSTRNGAVDCRNTRGIITAGHRGGGHKRLYHKIDFRRNKKDIYGRIVTIEYDLNRNAYICLIHYGDGERRYILHPRGESTSTDMPLGTTIHNIEITLGKG
GQLARGKSTTLKLPSGEVRLISKNCSTTVGQVGNVGVNQKSLGRVGSKCWLGKCPVVRGIVMNPVDYPHGVVKGGPQLVEKTRNPLGLSCIWKKK

Tan0000957 (gene) of Snake gourd v1 genome