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Tan0000976 (gene) of Snake gourd v1 genome

Gene IDTan0000976
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-conjugating enzyme family protein
Genome locationLG05:10366290..10370998
RNA-Seq ExpressionTan0000976
SyntenyTan0000976
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0090378 - seed trichome elongation (biological process)
GO:0005622 - intracellular (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY14867.1 Ubiquitin-conjugating enzyme family protein isoform 2 [Theobroma cacao]2.4e-2653.47Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGII-
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  W+IEVN A GTLYANETY  +      Y    P        P HPH YSNGHICL C     I+ 
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGII-

Query:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        D W   +TV      +  ML++  +K +  D +  V+NCRN R+
Subjt:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

KAA8537578.1 hypothetical protein F0562_027186 [Nyssa sinensis]1.8e-2653.47Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y        +IP + PPHPH YSNGHICL       + 
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII

Query:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        D W   +TV      +  ML++  +K +  D +  V+NC+N R+
Subjt:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

KAF8405291.1 hypothetical protein HHK36_010193 [Tetracentron sinense]3.1e-2652.41Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLG--CVDKKGI
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  W+IEVN A GTLYANE Y  +   S  Y    P     +  P HPH YSNGHICLG    +   +
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLG--CVDKKGI

Query:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         D W   +TV      +  ML++  +K +  D +  V+NCRN R+
Subjt:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

XP_018821184.1 probable ubiquitin-conjugating enzyme E2 16 isoform X1 [Juglans regia]1.8e-2653.85Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT
         W   +TV      +  ML++  LK +   D+  V+NCRN R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT

XP_018821185.1 probable ubiquitin-conjugating enzyme E2 16 isoform X2 [Juglans regia]1.8e-2653.85Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT
         W   +TV      +  ML++  LK +   D+  V+NCRN R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT

TrEMBL top hitse value%identityAlignment
A0A061FDS1 Ubiquitin-conjugating enzyme family protein isoform 21.1e-2653.47Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGII-
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  W+IEVN A GTLYANETY  +      Y    P        P HPH YSNGHICL C     I+ 
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGII-

Query:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        D W   +TV      +  ML++  +K +  D +  V+NCRN R+
Subjt:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

A0A2G5EAT7 UBC core domain-containing protein4.4e-2653.47Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y        +IP + P HPH YSNGHICL       + 
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII

Query:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        D W   +TV      +  ML++   K +  D +  V+NCRN R+
Subjt:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

A0A2I4EP56 probable ubiquitin-conjugating enzyme E2 16 isoform X28.8e-2753.85Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT
         W   +TV      +  ML++  LK +   D+  V+NCRN R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT

A0A2I4EP61 probable ubiquitin-conjugating enzyme E2 16 isoform X18.8e-2753.85Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT
         W   +TV      +  ML++  LK +   D+  V+NCRN R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPK-LQDEVVVRNCRNCRT

A0A5J5B4M4 UBC core domain-containing protein8.8e-2753.47Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII
        ALSKIACN LQKELVEWQVNPPAGFKHKVTDNL  WVIEVN A GTLYANETY  +      Y        +IP + PPHPH YSNGHICL       + 
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNS------YIPASNPPHPHTYSNGHICLGCVDKKGII

Query:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        D W   +TV      +  ML++  +K +  D +  V+NC+N R+
Subjt:  DGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

SwissProt top hitse value%identityAlignment
O23239 Probable ubiquitin-conjugating enzyme E2 175.3e-2142.25Show/hide
Query:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIPA-----SNPPHPHTYSNGHICLGCVDKKGIIDG
        L+KIA N LQKE +EWQ NPP+GFKH+V+DNL  W+IEV+   GTLYANETY  +      Y    P        P HPH YSNGHICL       + D 
Subjt:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIPA-----SNPPHPHTYSNGHICLGCVDKKGIIDG

Query:  WLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        W   + +      +  ML++  +K K +D +  ++NC++ R+
Subjt:  WLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

P42743 Ubiquitin-conjugating enzyme 151.0e-2447.55Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKEL EWQ+NPP GF+HKVTDNL  W I+V  A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

Q55EY8 Probable ubiquitin-conjugating enzyme E2 W6.1e-0938.53Show/hide
Query:  LQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSY-------IPASNPP-HPHTYSNGHICLGCVDKKGIIDGWLKILT
        LQKEL++ + NPP        DNL  WVI V+   G++Y  E  HF+   +F + Y       I    PP HPH YSNGHICL       + D W   LT
Subjt:  LQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSY-------IPASNPP-HPHTYSNGHICLGCVDKKGIIDGWLKILT

Query:  VKKYQLYMM
        V    L ++
Subjt:  VKKYQLYMM

Q9FMM0 Probable ubiquitin-conjugating enzyme E2 182.1e-2549.65Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKEL EWQVNPP GFKH+VTDNL  WVIEV  A GTLYANETY+ +    + Y    P        P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 168.7e-2446.9Show/hide
Query:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSYIPASNPP---------HPHTYSNGHICLGCVDKKGI
        LSKIA N LQKELVEWQ+NPP GFKHKVTDNL  W+IEV  A GTLYAN+TY    L   +  + P  +P          HPH YSNGHICL       +
Subjt:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSYIPASNPP---------HPHTYSNGHICLGCVDKKGI

Query:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         D W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

Arabidopsis top hitse value%identityAlignment
AT1G45050.1 Ubiquitin-conjugating enzyme family protein7.3e-2647.55Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKEL EWQ+NPP GF+HKVTDNL  W I+V  A GTLYANETY  +      Y    P     +  P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

AT1G75440.1 ubiquitin-conjugating enzyme 166.2e-2546.9Show/hide
Query:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSYIPASNPP---------HPHTYSNGHICLGCVDKKGI
        LSKIA N LQKELVEWQ+NPP GFKHKVTDNL  W+IEV  A GTLYAN+TY    L   +  + P  +P          HPH YSNGHICL       +
Subjt:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFRGLSRFYNSYIPASNPP---------HPHTYSNGHICLGCVDKKGI

Query:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         D W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  IDGWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

AT4G36410.1 ubiquitin-conjugating enzyme 173.8e-2242.25Show/hide
Query:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIPA-----SNPPHPHTYSNGHICLGCVDKKGIIDG
        L+KIA N LQKE +EWQ NPP+GFKH+V+DNL  W+IEV+   GTLYANETY  +      Y    P        P HPH YSNGHICL       + D 
Subjt:  LSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIPA-----SNPPHPHTYSNGHICLGCVDKKGIIDG

Query:  WLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
        W   + +      +  ML++  +K K +D +  ++NC++ R+
Subjt:  WLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT

AT5G42990.1 ubiquitin-conjugating enzyme 181.5e-2649.65Show/hide
Query:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID
        ALSKIACN LQKEL EWQVNPP GFKH+VTDNL  WVIEV  A GTLYANETY+ +    + Y    P        P HPH YSNGHICL       + D
Subjt:  ALSKIACNFLQKELVEWQVNPPAGFKHKVTDNL--WVIEVNEALGTLYANETYHFR-GLSRFYNSYIP-----ASNPPHPHTYSNGHICLGCVDKKGIID

Query:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT
         W   +TV      +  ML++   K +  D +  V+NC+N R+
Subjt:  GWLKILTVKK--YQLYMMLTARRLKPKLQD-EVVVRNCRNCRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGCTCTGAGTAAGATTGCTTGCAATTTCCTCCAGAAGGAACTTGTCGAGTGGCAGGTTAACCCTCCTGCTGGTTTTAAACACAAGGTCACCGATAATCTGTGGGT
GATTGAAGTCAACGAAGCTCTTGGAACTCTCTATGCAAATGAAACCTATCACTTTCGTGGACTTTCCCGATTTTATAACAGCTATATTCCCGCATCCAACCCTCCGCATC
CTCATACCTATAGCAATGGTCACATTTGTCTAGGTTGTGTCGATAAAAAGGGTATTATTGACGGTTGGCTAAAAATATTGACGGTTAAAAAATATCAACTATACATGATG
TTGACGGCTCGCAGATTAAAACCGAAATTACAAGATGAAGTTGTTGTAAGGAACTGTAGAAATTGCAGAACCGAAATTGCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGCTCTGAGTAAGATTGCTTGCAATTTCCTCCAGAAGGAACTTGTCGAGTGGCAGGTTAACCCTCCTGCTGGTTTTAAACACAAGGTCACCGATAATCTGTGGGT
GATTGAAGTCAACGAAGCTCTTGGAACTCTCTATGCAAATGAAACCTATCACTTTCGTGGACTTTCCCGATTTTATAACAGCTATATTCCCGCATCCAACCCTCCGCATC
CTCATACCTATAGCAATGGTCACATTTGTCTAGGTTGTGTCGATAAAAAGGGTATTATTGACGGTTGGCTAAAAATATTGACGGTTAAAAAATATCAACTATACATGATG
TTGACGGCTCGCAGATTAAAACCGAAATTACAAGATGAAGTTGTTGTAAGGAACTGTAGAAATTGCAGAACCGAAATTGCAAGATAA
Protein sequenceShow/hide protein sequence
MTALSKIACNFLQKELVEWQVNPPAGFKHKVTDNLWVIEVNEALGTLYANETYHFRGLSRFYNSYIPASNPPHPHTYSNGHICLGCVDKKGIIDGWLKILTVKKYQLYMM
LTARRLKPKLQDEVVVRNCRNCRTEIAR