; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000979 (gene) of Snake gourd v1 genome

Gene IDTan0000979
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG06:78433545..78434291
RNA-Seq ExpressionTan0000979
SyntenyTan0000979
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575019.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.2e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+A ELF+RIPE+DVISWATMIDG+VQVK+L EALLM+SAMRK DL PNEVMIVDLLSACGQS+SIDEGRQ HS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFHGM V+G+
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAA GKLAEGRW HEYVCNKAIPLNDNLSAAVIDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

KAG7013592.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+A ELF+RIPE+DVISWATMIDG+VQVK+L EALLM+SAMRK DL PNEVMIVDLLSACGQS+SIDEGRQ HS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFHGM V+G+
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAA GKLAEGRW HEYVCNKAIPLNDNLSAAVIDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

XP_016902281.1 PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 [Cucumis melo]6.2e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDEGRQFHS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFH M V+ +
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAALGKL EGRWTHEYV NKAIPLNDNLSAA+IDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

XP_016902282.1 PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 [Cucumis melo]6.2e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDEGRQFHS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFH M V+ +
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAALGKL EGRWTHEYV NKAIPLNDNLSAA+IDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

XP_023548174.1 pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo]2.1e-6757.25Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+A ELF+RIPERDVISWATMIDG+V+VK+L EALLM+SAMRKSDL PNEVMIVDLLSACGQS+SIDEGRQ HS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFHGM V+G+
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF
        EPNEITMVSV SAIAA GKLAEGRW HEYVCNKAIPLNDNLSAAVIDMY KC + R +   F
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF

TrEMBL top hitse value%identityAlignment
A0A1S3C877 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X32.5e-6663.84Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDE----------
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDE          
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDE----------

Query:  ----------------------------GRQFHSMI-----------------NELPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHE
                                     RQ   M+                 NELP+MALELFH M V+ +EPNEITMVSV SAIAALGKL EGRWTHE
Subjt:  ----------------------------GRQFHSMI-----------------NELPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHE

Query:  YVCNKAIPLNDNLSAAVIDMYDKC
        YV NKAIPLNDNLSAA+IDMY KC
Subjt:  YVCNKAIPLNDNLSAAVIDMYDKC

A0A1S4E227 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X13.0e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDEGRQFHS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFH M V+ +
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAALGKL EGRWTHEYV NKAIPLNDNLSAA+IDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

A0A1S4E229 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X23.0e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDEGRQFHS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFH M V+ +
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAALGKL EGRWTHEYV NKAIPLNDNLSAA+IDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

A0A5A7SVF5 Pentatricopeptide repeat-containing protein3.0e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MPVRNTVSWNVMLKGYVKS LVD+ARELFERIPERDV SWATMIDG+VQ+KRL EALL+YSAMRKSD  PNEV+IVDLLSACGQSVSIDEGRQFHS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFH M V+ +
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAALGKL EGRWTHEYV NKAIPLNDNLSAA+IDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

A0A6J1H4P4 pentatricopeptide repeat-containing protein At5g19020, mitochondrial5.1e-6758.33Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MP+RNTVSWNVMLKGYVKS LVD+A ELF+RIPERDVISWATMIDG+VQVK+L EAL M+SAMRKSDL PNEVMIVDLLSACGQS+SIDEGRQ HS+I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV
                                                                                         NELP+MALELFHGM V+G+
Subjt:  ---------------------------------------------------------------------------------NELPNMALELFHGMEVTGV

Query:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        EPNEITMVSV SAIAA GKLAEGRW HEYVCNKAIPLNDNLSAAVIDMY KC
Subjt:  EPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

SwissProt top hitse value%identityAlignment
O22137 Pentatricopeptide repeat-containing protein At2g45350, chloroplastic4.1e-2134.12Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MP ++ +SWN M+ GYVK   +++A+ LF+ +P RDV++WATMIDGY ++  +  A  ++  M   D+     M+   +                   N+
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNMALELFHGME-VTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
            ALE+F  ME  + + P++ T+V V  AIA LG+L++    H Y+  K   L   L  A+IDMY KC
Subjt:  LPNMALELFHGME-VTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

O49399 Pentatricopeptide repeat-containing protein At4g188404.8e-2235.56Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MPVR+ VSWN +L  Y++  LVDEAR LF+ + ER+V SW  MI GY     + EA  ++ +M   D+     M+                       NE
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNMALELFHGMEVTGVE-PNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF
        +    LE+F+ M     E P+  T+VSV SA A+LG L++G W H Y+    I +   L+ A++DMY KC    K+   F
Subjt:  LPNMALELFHGMEVTGVE-PNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF

P0C8Q8 Pentatricopeptide repeat-containing protein At5g19020, mitochondrial1.6e-3335.18Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MP RN V+WNVML GY K+ L+++A ELF++I E+D++SW TMIDG ++  +L EAL+ Y+ M +  ++P+EVM+VDLLSA  +SV   +G Q H  I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  --------------------NEL-------------------------------------------------------------PNMALELFHGM-EVTG
                            N++                                                             P +AL LF  M   + 
Subjt:  --------------------NEL-------------------------------------------------------------PNMALELFHGM-EVTG

Query:  VEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        V+P+ ITMVSV SAI++LG L EG+  H+Y+    IP NDNL+AA+IDMY KC
Subjt:  VEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic7.9e-2531.08Show/hide
Query:  PVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE-
        P R+ VS+  ++KGY     ++ A++LF+ IP +DV+SW  MI GY +     EAL ++  M K++++P+E  +V ++SAC QS SI+ GRQ H  I++ 
Subjt:  PVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE-

Query:  ---------------------------------------------------LPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCN
                                                           L   AL LF  M  +G  PN++TM+S+  A A LG +  GRW H Y+  
Subjt:  ---------------------------------------------------LPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCN

Query:  --KAIPLNDNLSAAVIDMYDKC
          K +    +L  ++IDMY KC
Subjt:  --KAIPLNDNLSAAVIDMYDKC

Q9SIT7 Pentatricopeptide repeat-containing protein At2g136007.7e-2030.43Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MP RN  +WN ++ G  K   +DEA  LF  +PERD  +W +M+ G+ Q  R  EAL  ++ M K     NE     +LSAC     +++G Q HS+I +
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNM----------------------------------------------------ALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVC
         P +                                                    AL++F  M  + VEP+E+T+ SV SA A+L  +  G+  H  V 
Subjt:  LPNM----------------------------------------------------ALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVC

Query:  NKAIPLND-NLSAAVIDMYDKCRNRRKSCR
              ND  LS A +DMY KC +R K  R
Subjt:  NKAIPLND-NLSAAVIDMYDKCRNRRKSCR

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.6e-2631.08Show/hide
Query:  PVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE-
        P R+ VS+  ++KGY     ++ A++LF+ IP +DV+SW  MI GY +     EAL ++  M K++++P+E  +V ++SAC QS SI+ GRQ H  I++ 
Subjt:  PVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE-

Query:  ---------------------------------------------------LPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCN
                                                           L   AL LF  M  +G  PN++TM+S+  A A LG +  GRW H Y+  
Subjt:  ---------------------------------------------------LPNMALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCN

Query:  --KAIPLNDNLSAAVIDMYDKC
          K +    +L  ++IDMY KC
Subjt:  --KAIPLNDNLSAAVIDMYDKC

AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein5.4e-2130.43Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MP RN  +WN ++ G  K   +DEA  LF  +PERD  +W +M+ G+ Q  R  EAL  ++ M K     NE     +LSAC     +++G Q HS+I +
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNM----------------------------------------------------ALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVC
         P +                                                    AL++F  M  + VEP+E+T+ SV SA A+L  +  G+  H  V 
Subjt:  LPNM----------------------------------------------------ALELFHGMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVC

Query:  NKAIPLND-NLSAAVIDMYDKCRNRRKSCR
              ND  LS A +DMY KC +R K  R
Subjt:  NKAIPLND-NLSAAVIDMYDKCRNRRKSCR

AT2G45350.1 Pentatricopeptide repeat (PPR) superfamily protein2.9e-2234.12Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MP ++ +SWN M+ GYVK   +++A+ LF+ +P RDV++WATMIDGY ++  +  A  ++  M   D+     M+   +                   N+
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNMALELFHGME-VTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
            ALE+F  ME  + + P++ T+V V  AIA LG+L++    H Y+  K   L   L  A+IDMY KC
Subjt:  LPNMALELFHGME-VTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.4e-2335.56Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE
        MPVR+ VSWN +L  Y++  LVDEAR LF+ + ER+V SW  MI GY     + EA  ++ +M   D+     M+                       NE
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINE

Query:  LPNMALELFHGMEVTGVE-PNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF
        +    LE+F+ M     E P+  T+VSV SA A+LG L++G W H Y+    I +   L+ A++DMY KC    K+   F
Subjt:  LPNMALELFHGMEVTGVE-PNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREF

AT5G19020.1 mitochondrial editing factor 181.1e-3435.18Show/hide
Query:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--
        MP RN V+WNVML GY K+ L+++A ELF++I E+D++SW TMIDG ++  +L EAL+ Y+ M +  ++P+EVM+VDLLSA  +SV   +G Q H  I  
Subjt:  MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMI--

Query:  --------------------NEL-------------------------------------------------------------PNMALELFHGM-EVTG
                            N++                                                             P +AL LF  M   + 
Subjt:  --------------------NEL-------------------------------------------------------------PNMALELFHGM-EVTG

Query:  VEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC
        V+P+ ITMVSV SAI++LG L EG+  H+Y+    IP NDNL+AA+IDMY KC
Subjt:  VEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTTCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCCAGCCTTGTTGATGAAGCAAGAGAGTTGTTTGAAAGGATTCCAGAAAGAGATGT
GATTTCTTGGGCTACAATGATTGATGGGTATGTGCAAGTGAAACGGTTAAGTGAAGCTTTGTTGATGTATTCTGCAATGAGAAAAAGCGATTTGCAGCCCAATGAAGTGA
TGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAGTTTCAATTGATGAGGGCAGGCAGTTCCATTCCATGATAAATGAGTTGCCTAATATGGCTTTAGAGCTTTTCCAT
GGAATGGAGGTCACCGGGGTCGAGCCTAACGAGATCACCATGGTGAGCGTTTCCTCTGCCATTGCAGCTTTAGGCAAACTAGCAGAAGGAAGATGGACCCATGAATATGT
TTGCAACAAAGCTATCCCTCTTAATGATAATTTGAGTGCTGCGGTTATTGACATGTATGACAAATGTAGAAATAGACGAAAGAGCTGCAGAGAGTTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTTCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCCAGCCTTGTTGATGAAGCAAGAGAGTTGTTTGAAAGGATTCCAGAAAGAGATGT
GATTTCTTGGGCTACAATGATTGATGGGTATGTGCAAGTGAAACGGTTAAGTGAAGCTTTGTTGATGTATTCTGCAATGAGAAAAAGCGATTTGCAGCCCAATGAAGTGA
TGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAGTTTCAATTGATGAGGGCAGGCAGTTCCATTCCATGATAAATGAGTTGCCTAATATGGCTTTAGAGCTTTTCCAT
GGAATGGAGGTCACCGGGGTCGAGCCTAACGAGATCACCATGGTGAGCGTTTCCTCTGCCATTGCAGCTTTAGGCAAACTAGCAGAAGGAAGATGGACCCATGAATATGT
TTGCAACAAAGCTATCCCTCTTAATGATAATTTGAGTGCTGCGGTTATTGACATGTATGACAAATGTAGAAATAGACGAAAGAGCTGCAGAGAGTTTGGCTAG
Protein sequenceShow/hide protein sequence
MPVRNTVSWNVMLKGYVKSSLVDEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSDLQPNEVMIVDLLSACGQSVSIDEGRQFHSMINELPNMALELFH
GMEVTGVEPNEITMVSVSSAIAALGKLAEGRWTHEYVCNKAIPLNDNLSAAVIDMYDKCRNRRKSCREFG