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Tan0000993 (gene) of Snake gourd v1 genome

Gene IDTan0000993
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:100292079..100298866
RNA-Seq ExpressionTan0000993
SyntenyTan0000993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]7.4e-0527.34Show/hide
Query:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQM-------SNQEDHNNKTFLP--------LSKRGKSIN
        R  W   D W+++   ++ E++   +++ W +W  RN   FR   +  + L R + L I S +         +    N  +LP        L  R  +  
Subjt:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQM-------SNQEDHNNKTFLP--------LSKRGKSIN

Query:  SKYWTLKADAAWSNRLERGGLGWIVKD-GDDQPLIGGCK
        +  W L  DA+WS   E GG+GWI+ D   +  L G CK
Subjt:  SKYWTLKADAAWSNRLERGGLGWIVKD-GDDQPLIGGCK

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]8.2e-0426.83Show/hide
Query:  IDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMS-------NQEDHNNKTFLPLSKRGKSINSKYWTLKADAAWSN
        +DY+D+I +  ++   +  L+++WS+WT RN +    ++      +R    + + + +       N ED N    LP +          W L  DA W +
Subjt:  IDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMS-------NQEDHNNKTFLPLSKRGKSINSKYWTLKADAAWSN

Query:  RLERGGLGWIVKDGDDQPLIGGC
         L  GGLGWIV+D + + ++  C
Subjt:  RLERGGLGWIVKDGDDQPLIGGC

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.3e-0623.13Show/hide
Query:  IGRKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------W
        I R  W   +YW+++  K   E+ +R +++   +W  RN   F+ +     D+   ++  I++      +    +K F P+ + G +  +++       W
Subjt:  IGRKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------W

Query:  TLKADAAWSNRLERGGLGWIVKDGDDQPLIGGCK
         L  DAAW       G+GWI++D   + +  GC+
Subjt:  TLKADAAWSNRLERGGLGWIVKDGDDQPLIGGCK

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]3.9e-0622.73Show/hide
Query:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------WTL
        R  W   +YW+++  K   E+ +R +++   +W  RN   F+ +     D+   ++  I++      +    +K F P+ + G +  +++       W L
Subjt:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------WTL

Query:  KADAAWSNRLERGGLGWIVKDGDDQPLIGGCK
          DAAW       G+GWI++D   + +  GC+
Subjt:  KADAAWSNRLERGGLGWIVKDGDDQPLIGGCK

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]4.3e-0530.43Show/hide
Query:  KVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQEDHNNKTFLPLSKRGKSINSK---------YWTLKADAAWSNRLERGGL
        K + EDL  +L+  W +W  RN + FR    S   ++++     L++   +  + ++T   LS   K++N+K          WTL ADA+WS+   RGG+
Subjt:  KVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQEDHNNKTFLPLSKRGKSINSK---------YWTLKADAAWSNRLERGGL

Query:  GWIVKDGDDQPLIGG
        GWI++  D   ++ G
Subjt:  GWIVKDGDDQPLIGG

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132163.6e-0527.34Show/hide
Query:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQM-------SNQEDHNNKTFLP--------LSKRGKSIN
        R  W   D W+++   ++ E++   +++ W +W  RN   FR   +  + L R + L I S +         +    N  +LP        L  R  +  
Subjt:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQM-------SNQEDHNNKTFLP--------LSKRGKSIN

Query:  SKYWTLKADAAWSNRLERGGLGWIVKD-GDDQPLIGGCK
        +  W L  DA+WS   E GG+GWI+ D   +  L G CK
Subjt:  SKYWTLKADAAWSNRLERGGLGWIVKD-GDDQPLIGGCK

A0A6J1D4B6 uncharacterized protein LOC1110171814.0e-0426.83Show/hide
Query:  IDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMS-------NQEDHNNKTFLPLSKRGKSINSKYWTLKADAAWSN
        +DY+D+I +  ++   +  L+++WS+WT RN +    ++      +R    + + + +       N ED N    LP +          W L  DA W +
Subjt:  IDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMS-------NQEDHNNKTFLPLSKRGKSINSKYWTLKADAAWSN

Query:  RLERGGLGWIVKDGDDQPLIGGC
         L  GGLGWIV+D + + ++  C
Subjt:  RLERGGLGWIVKDGDDQPLIGGC

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X16.5e-0723.13Show/hide
Query:  IGRKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------W
        I R  W   +YW+++  K   E+ +R +++   +W  RN   F+ +     D+   ++  I++      +    +K F P+ + G +  +++       W
Subjt:  IGRKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------W

Query:  TLKADAAWSNRLERGGLGWIVKDGDDQPLIGGCK
         L  DAAW       G+GWI++D   + +  GC+
Subjt:  TLKADAAWSNRLERGGLGWIVKDGDDQPLIGGCK

A0A6J1DNV9 uncharacterized protein LOC1110224032.1e-0530.43Show/hide
Query:  KVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQEDHNNKTFLPLSKRGKSINSK---------YWTLKADAAWSNRLERGGL
        K + EDL  +L+  W +W  RN + FR    S   ++++     L++   +  + ++T   LS   K++N+K          WTL ADA+WS+   RGG+
Subjt:  KVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQEDHNNKTFLPLSKRGKSINSK---------YWTLKADAAWSNRLERGGL

Query:  GWIVKDGDDQPLIGG
        GWI++  D   ++ G
Subjt:  GWIVKDGDDQPLIGG

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.9e-0622.73Show/hide
Query:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------WTL
        R  W   +YW+++  K   E+ +R +++   +W  RN   F+ +     D+   ++  I++      +    +K F P+ + G +  +++       W L
Subjt:  RKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQED--HNNKTFLPLSKRGKSINSKY-------WTL

Query:  KADAAWSNRLERGGLGWIVKDGDDQPLIGGCK
          DAAW       G+GWI++D   + +  GC+
Subjt:  KADAAWSNRLERGGLGWIVKDGDDQPLIGGCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGGTCCCAGTCGTTCTCCGATTTCTCAAAAGTTTCGACAATCTCTAATGGCGGCTCCTGGATTGACCAAGTCCAAATCGGAAGGAAAAAATGGTGTCCGATCGA
TTATTGGGACTACATCAGGAAGAAAGTAAACAGAGAAGATTTAAAGAGAATCCTGCTAGTGATGTGGAGTATGTGGACTCAAAGAAATAACATGCGCTTCAGAAGGATGC
AGTTGTCAGTAGAAGACTTGGTTAGGAAGGTGGAGCTAAATATTCTTTCTCAAATGTCGAACCAAGAAGATCACAACAACAAGACTTTTCTTCCTCTTTCGAAAAGAGGA
AAGTCCATTAATTCAAAGTATTGGACTCTCAAAGCAGATGCAGCATGGTCCAACAGGTTGGAGCGTGGTGGGCTAGGTTGGATCGTTAAAGATGGAGATGACCAACCTCT
GATTGGTGGATGCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGGTCCCAGTCGTTCTCCGATTTCTCAAAAGTTTCGACAATCTCTAATGGCGGCTCCTGGATTGACCAAGTCCAAATCGGAAGGAAAAAATGGTGTCCGATCGA
TTATTGGGACTACATCAGGAAGAAAGTAAACAGAGAAGATTTAAAGAGAATCCTGCTAGTGATGTGGAGTATGTGGACTCAAAGAAATAACATGCGCTTCAGAAGGATGC
AGTTGTCAGTAGAAGACTTGGTTAGGAAGGTGGAGCTAAATATTCTTTCTCAAATGTCGAACCAAGAAGATCACAACAACAAGACTTTTCTTCCTCTTTCGAAAAGAGGA
AAGTCCATTAATTCAAAGTATTGGACTCTCAAAGCAGATGCAGCATGGTCCAACAGGTTGGAGCGTGGTGGGCTAGGTTGGATCGTTAAAGATGGAGATGACCAACCTCT
GATTGGTGGATGCAAGTAA
Protein sequenceShow/hide protein sequence
MRRSQSFSDFSKVSTISNGGSWIDQVQIGRKKWCPIDYWDYIRKKVNREDLKRILLVMWSMWTQRNNMRFRRMQLSVEDLVRKVELNILSQMSNQEDHNNKTFLPLSKRG
KSINSKYWTLKADAAWSNRLERGGLGWIVKDGDDQPLIGGCK