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Tan0001033 (gene) of Snake gourd v1 genome

Gene IDTan0001033
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor MYB34
Genome locationLG09:1072626..1073764
RNA-Seq ExpressionTan0001033
SyntenyTan0001033
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]2.0e-2386.36Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF
        RAIR Y +P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLG+SDSF
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]2.7e-2857.97Show/hide
Query:  MNDFPGLEFFLDPELERAFHRRRRIEKEKMADFCGGPID----PNNPQNNPGNQPHGQGGFRPPL-VEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTF
        MN   GLEF LDPE+ER F RRR  +K+KM +     I+     N    NP    + +     P+ +     RAIR Y +P VEELNP IIRPEIQ  TF
Subjt:  MNDFPGLEFFLDPELERAFHRRRRIEKEKMADFCGGPID----PNNPQNNPGNQPHGQGGFRPPL-VEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTF

Query:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF
        ELKPVMFQMLQTIGQFHGL  EDPHLHLKSFLG+SDSF
Subjt:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF

XP_022947838.1 uncharacterized protein LOC111451598 [Cucurbita moschata]5.4e-2476.32Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        RAIR Y +P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGLSS+DPHLHLKSFLG+SDSF   G  + ++
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]1.6e-2375Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        RAIR Y +P V+ELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLG+SDSF   G  + ++
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]3.1e-2448.87Show/hide
Query:  LDPELERAFHRRRRIEKEKMADFCGGPIDPNNPQNNPGNQPHGQGGFRPPLVEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQ
        +DPE+ER F +RR+ +K K         +     N             P  +     RAIR Y  P+  ELNPGI+RPEIQAP FELKPVMFQMLQT+GQ
Subjt:  LDPELERAFHRRRRIEKEKMADFCGGPIDPNNPQNNPGNQPHGQGGFRPPLVEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQ

Query:  FHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        F G  +EDPHLH++SFL +SDSF L G  E+ L
Subjt:  FHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333949.9e-2486.36Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF
        RAIR Y +P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLG+SDSF
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF

A0A6J1EQ90 uncharacterized protein LOC1114364111.3e-2857.97Show/hide
Query:  MNDFPGLEFFLDPELERAFHRRRRIEKEKMADFCGGPID----PNNPQNNPGNQPHGQGGFRPPL-VEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTF
        MN   GLEF LDPE+ER F RRR  +K+KM +     I+     N    NP    + +     P+ +     RAIR Y +P VEELNP IIRPEIQ  TF
Subjt:  MNDFPGLEFFLDPELERAFHRRRRIEKEKMADFCGGPID----PNNPQNNPGNQPHGQGGFRPPL-VEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTF

Query:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF
        ELKPVMFQMLQTIGQFHGL  EDPHLHLKSFLG+SDSF
Subjt:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSF

A0A6J1G7Q6 uncharacterized protein LOC1114515982.6e-2476.32Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        RAIR Y +P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGLSS+DPHLHLKSFLG+SDSF   G  + ++
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

A0A6J1H7E4 uncharacterized protein LOC1114611687.6e-2475Show/hide
Query:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        RAIR Y +P V+ELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLG+SDSF   G  + ++
Subjt:  RAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

U5CUI2 Retrotrans_gag domain-containing protein6.4e-2363.53Show/hide
Query:  PPLVEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL
        P ++     RAIR Y  P+  ELNPGI+RPEIQAP FELKPVMFQMLQT+GQF G+ +EDPHLHL+SFL +SDSF + G  E++L
Subjt:  PPLVEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGISDSFILSGALEKIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTTCCCAGGTTTAGAATTTTTCTTAGATCCTGAACTTGAGAGAGCATTTCATAGAAGAAGGAGGATTGAAAAGGAAAAAATGGCAGATTTTTGTGGAGGTCC
TATAGATCCTAATAATCCTCAGAATAACCCTGGAAACCAACCACACGGCCAAGGAGGCTTTAGACCACCTTTAGTTGAACCCCAAGCTATGAGAGCTATTAGAACTTATG
TCAATCCCTTGGTTGAAGAGCTAAACCCTGGGATTATTAGGCCAGAAATCCAAGCCCCAACGTTTGAGCTTAAACCTGTCATGTTCCAAATGCTCCAAACCATAGGACAG
TTTCATGGACTATCATCTGAAGATCCTCACTTGCATTTGAAATCCTTCCTAGGGATTAGTGATTCTTTTATACTGTCAGGAGCCTTAGAAAAGATTCTGGGATCTTTGGT
AGAGAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTTCCCAGGTTTAGAATTTTTCTTAGATCCTGAACTTGAGAGAGCATTTCATAGAAGAAGGAGGATTGAAAAGGAAAAAATGGCAGATTTTTGTGGAGGTCC
TATAGATCCTAATAATCCTCAGAATAACCCTGGAAACCAACCACACGGCCAAGGAGGCTTTAGACCACCTTTAGTTGAACCCCAAGCTATGAGAGCTATTAGAACTTATG
TCAATCCCTTGGTTGAAGAGCTAAACCCTGGGATTATTAGGCCAGAAATCCAAGCCCCAACGTTTGAGCTTAAACCTGTCATGTTCCAAATGCTCCAAACCATAGGACAG
TTTCATGGACTATCATCTGAAGATCCTCACTTGCATTTGAAATCCTTCCTAGGGATTAGTGATTCTTTTATACTGTCAGGAGCCTTAGAAAAGATTCTGGGATCTTTGGT
AGAGAGAATTTGA
Protein sequenceShow/hide protein sequence
MNDFPGLEFFLDPELERAFHRRRRIEKEKMADFCGGPIDPNNPQNNPGNQPHGQGGFRPPLVEPQAMRAIRTYVNPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQ
FHGLSSEDPHLHLKSFLGISDSFILSGALEKILGSLVERI