| GenBank top hits | e value | %identity | Alignment |
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| KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 9.4e-29 | 42.5 | Show/hide |
Query: SQIENQDVAESSQTPGVVTHLKNQMRNLALCDSCQFRGHKR-----KDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKFSFTSY--------------
SQ + + + + + VV H K + + S + H + K K + K + KP++ + QPRQ +T +F S+
Subjt: SQIENQDVAESSQTPGVVTHLKNQMRNLALCDSCQFRGHKR-----KDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKFSFTSY--------------
Query: -----------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESM
Y + EEVD+S E+KQRTSVFDRIKP TTR SVFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRLK+T+ Q +
Subjt: -----------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESM
Query: MNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
M + KA+ F +E +K+ S VPSRMKRK SV INTEG L
Subjt: MNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa] | 1.2e-28 | 62.02 | Show/hide |
Query: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Y + EEVD+S E+KQRTS+FDRIKP TTR VFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRLK+T+ Q + M + KA+ F +
Subjt: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Query: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
E +K+ S VPSRMKRK SV INTEG L
Subjt: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| KAA0062746.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 2.7e-28 | 58.46 | Show/hide |
Query: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDE
Y++++EVD+S E+K+RTS+FDRIKPSTTR SVF+R+SMA EEEN LTS+S +TS F+RL++STSKK RPS S FDRLK+T+ Q + + T K + F E
Subjt: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDE
Query: VSHN--KVQSTVPSRMKRKFSVLINTEGFL
+++ K+ + VPSRMKRK SV I+TEG L
Subjt: VSHN--KVQSTVPSRMKRKFSVLINTEGFL
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| KAA0063719.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.1e-28 | 56.67 | Show/hide |
Query: PRQLVTSTKFSFTSY------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRL
P++++ T TS Y + +EVD+S E+KQRTSVFDRIKP TTR SVFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRL
Subjt: PRQLVTSTKFSFTSY------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRL
Query: KVTSGQDESMMNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
K+T+ Q + M KA+ F +E +K+ S VPSRMKRK SV INTEG L
Subjt: KVTSGQDESMMNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| TYK14888.1 gag protease polyprotein [Cucumis melo var. makuwa] | 3.6e-28 | 62.02 | Show/hide |
Query: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Y +++EV++S E+ QRTSVFDRIKPSTTR SVFQR+SMA EEEN T RTS F+RL++STSKK RPSTS FDRLK+T+ Q + M +SKA+ F +
Subjt: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Query: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
E +K+ S VPSRMKRK SV INTEG L
Subjt: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TQ06 Retrotransposon gag protein | 4.5e-29 | 42.5 | Show/hide |
Query: SQIENQDVAESSQTPGVVTHLKNQMRNLALCDSCQFRGHKR-----KDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKFSFTSY--------------
SQ + + + + + VV H K + + S + H + K K + K + KP++ + QPRQ +T +F S+
Subjt: SQIENQDVAESSQTPGVVTHLKNQMRNLALCDSCQFRGHKR-----KDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKFSFTSY--------------
Query: -----------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESM
Y + EEVD+S E+KQRTSVFDRIKP TTR SVFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRLK+T+ Q +
Subjt: -----------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESM
Query: MNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
M + KA+ F +E +K+ S VPSRMKRK SV INTEG L
Subjt: MNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| A0A5A7V8H3 Retrotransposon gag protein | 1.3e-28 | 58.46 | Show/hide |
Query: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDE
Y++++EVD+S E+K+RTS+FDRIKPSTTR SVF+R+SMA EEEN LTS+S +TS F+RL++STSKK RPS S FDRLK+T+ Q + + T K + F E
Subjt: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDE
Query: VSHN--KVQSTVPSRMKRKFSVLINTEGFL
+++ K+ + VPSRMKRK SV I+TEG L
Subjt: VSHN--KVQSTVPSRMKRKFSVLINTEGFL
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| A0A5A7VDY3 Ty3-gypsy retrotransposon protein | 1.0e-28 | 56.67 | Show/hide |
Query: PRQLVTSTKFSFTSY------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRL
P++++ T TS Y + +EVD+S E+KQRTSVFDRIKP TTR SVFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRL
Subjt: PRQLVTSTKFSFTSY------YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRL
Query: KVTSGQDESMMNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
K+T+ Q + M KA+ F +E +K+ S VPSRMKRK SV INTEG L
Subjt: KVTSGQDESMMNTSKAELF-DEVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| A0A5D3BBF9 Gag protease polyprotein | 5.9e-29 | 62.02 | Show/hide |
Query: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Y + EEVD+S E+KQRTS+FDRIKP TTR VFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRLK+T+ Q + M + KA+ F +
Subjt: YINTEEVDDSKEVKQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELF-D
Query: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
E +K+ S VPSRMKRK SV INTEG L
Subjt: EVSHNKVQSTVPSRMKRKFSVLINTEGFL
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| A0A5D3D209 Retrotransposon gag protein | 3.8e-28 | 46.3 | Show/hide |
Query: HLKNQMRNLALCDSCQFRGHKRKDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKF-------------------------SFTSYYINTEEVDDSKEV
H KN N++ HK+K +R NKK + KP++ + QPR+ +T +F + Y + EEVD+S E+
Subjt: HLKNQMRNLALCDSCQFRGHKRKDKRQNKKDSRRSKPMRKGNTKSSQPRQLVTSTKF-------------------------SFTSYYINTEEVDDSKEV
Query: KQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDEVS-HNKVQSTVPS
KQRTSVFDRIKP TTR VFQR+SMA EEEN TS+ RTS F+RL++STSKK RPSTS FDRLK+T+ Q + M + KA+ F E + NK+ S VPS
Subjt: KQRTSVFDRIKPSTTRPSVFQRMSMAATEEENLDLTSSSIRTSVFQRLNVSTSKKRRPSTSVFDRLKVTSGQDESMMNTSKAELFDEVS-HNKVQSTVPS
Query: RMKRKFSVLINTEGFL
RMKRK SV INTEG L
Subjt: RMKRKFSVLINTEGFL
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