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Tan0001066 (gene) of Snake gourd v1 genome

Gene IDTan0001066
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:34315242..34315490
RNA-Seq ExpressionTan0001066
SyntenyTan0001066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053873.1 hypothetical protein E6C27_scaffold135G002660 [Cucumis melo var. makuwa]3.7e-1158.02Show/hide
Query:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPTKTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILK
        MAGM  NFFPTDFYYPR   P  +     PL     +D+EVE+ L+K   A S  S+AI +K+V ASTSMAFLPPPSYILK
Subjt:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPTKTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILK

KAG6580888.1 hypothetical protein SDJN03_20890, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1459.77Show/hide
Query:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPT-----KTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILKN
        MAGMQYNFFPTDFYYPRP  P   PP  V + T     +T ED++ EQS+D+ KA  S  S+A+N+ VV AS S AFLPPPS+ILKN
Subjt:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPT-----KTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILKN

WP_217833416.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.8e-0663.33Show/hide
Query:  PPVIVPLPTKTAE-DQEVEQSLDKSKAASSTM--SIAINQKVVRASTSMAFLPPPSYILK
        P  +VP P KT E D+E + SLDK KA+ S +  S+AI+ KVV ASTSMAFLPPPSYILK
Subjt:  PPVIVPLPTKTAE-DQEVEQSLDKSKAASSTM--SIAINQKVVRASTSMAFLPPPSYILK

TrEMBL top hitse value%identityAlignment
A0A5A7UD60 Uncharacterized protein1.8e-1158.02Show/hide
Query:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPTKTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILK
        MAGM  NFFPTDFYYPR   P  +     PL     +D+EVE+ L+K   A S  S+AI +K+V ASTSMAFLPPPSYILK
Subjt:  MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPTKTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAATGCAATACAACTTTTTTCCTACAGATTTCTACTACCCTCGTCCGTTGTCACCGTTGTCGTCGCCGCCTGTAATTGTTCCTCTGCCAACAAAAACGGCGGA
AGATCAAGAAGTCGAGCAGTCCCTCGATAAATCGAAGGCGGCGTCGTCGACCATGTCAATAGCCATAAACCAGAAGGTGGTTAGAGCTTCCACTTCCATGGCGTTTCTTC
CTCCTCCCTCTTACATCCTCAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAATGCAATACAACTTTTTTCCTACAGATTTCTACTACCCTCGTCCGTTGTCACCGTTGTCGTCGCCGCCTGTAATTGTTCCTCTGCCAACAAAAACGGCGGA
AGATCAAGAAGTCGAGCAGTCCCTCGATAAATCGAAGGCGGCGTCGTCGACCATGTCAATAGCCATAAACCAGAAGGTGGTTAGAGCTTCCACTTCCATGGCGTTTCTTC
CTCCTCCCTCTTACATCCTCAAGAATTGA
Protein sequenceShow/hide protein sequence
MAGMQYNFFPTDFYYPRPLSPLSSPPVIVPLPTKTAEDQEVEQSLDKSKAASSTMSIAINQKVVRASTSMAFLPPPSYILKN