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Tan0001082 (gene) of Snake gourd v1 genome

Gene IDTan0001082
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationLG05:70734001..70735348
RNA-Seq ExpressionTan0001082
SyntenyTan0001082
Gene Ontology termsGO:0000380 - alternative mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]6.4e-4496.81Show/hide
Query:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP STLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022137737.1 uncharacterized protein LOC111009092 [Momordica charantia]4.5e-4597.85Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST+SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENR+AGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022924187.1 uncharacterized protein LOC111431708 [Cucurbita moschata]2.9e-4495.7Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST++RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENRAAGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_023000853.1 uncharacterized protein LOC111495175 [Cucurbita maxima]1.4e-4394.62Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST++RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENRAAGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]6.4e-4497.87Show/hide
Query:  MAPST-LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPST-LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
TrEMBL top hitse value%identityAlignment
A0A1S3AVT0 uncharacterized protein LOC1034832123.1e-4496.81Show/hide
Query:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP STLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A5A7UIX5 Uncharacterized protein3.1e-4496.81Show/hide
Query:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP STLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1C941 uncharacterized protein LOC1110090922.2e-4597.85Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST+SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENR+AGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1E888 uncharacterized protein LOC1114317081.4e-4495.7Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST++RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENRAAGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1KNV1 uncharacterized protein LOC1114951757.0e-4494.62Show/hide
Query:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPST++RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENRAAGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein1.5e-2250.6Show/hide
Query:  LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R++KE+R  G+L+N  EGEKYA+H  RK++R + P++MPS+N FF+
Subjt:  LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein6.9e-3680Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        SRWLRPEVYPLFAA GVAVGIC F L+RNI  NPEVR +KENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCACCCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCACTATTTGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTCAGTTAGTCCGTAACATCTG
CATCAATCCTGAAGTCAGAGTAAGCAAGGAGAATAGAGCCGCTGGGGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATGCCGAGCATTTCCTGAGGAAATTCGTCCGCA
ACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTCTTCACCGACCCAAGTCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTCTCATCCCCTCCTCCCCAAAACTCTCCGATTCAGTTGCGCCTCAGTCTCATCGATCCGCTTCCTCCACCGAAATTCATCAATGGCTCCTTCCACCCTTAGTCGAT
GGCTGAGGCCTGAGGTTTACCCACTATTTGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTCAGTTAGTCCGTAACATCTGCATCAATCCTGAAGTCAGAGTAAGC
AAGGAGAATAGAGCCGCTGGGGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATGCCGAGCATTTCCTGAGGAAATTCGTCCGCAACAAGTCCCCAGAAATTATGCCATC
AATCAACAACTTCTTCACCGACCCAAGTCGAAACTAAGATGATACATGAATCAACTACACATTAGTTTGGATATAGATTCAAATTTGGATTGTTGGTGAGTTGGTGGCTG
TAAACTATGCTGCTGCTGTTACGTTTGCTTTTATTGTTGATCTGAGAAAGTTTGAAAACAGTGGTTTTGATGAAATAAACTGTACTGAACCCAAATTTGATTTCAGTTAT
TGTGAAATTCTGCTGCTGGTCTTTGATGGATATGTAAATTGTCTCATCCTATATATATTTTTTTTCTGAT
Protein sequenceShow/hide protein sequence
MAPSTLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN