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Tan0001084 (gene) of Snake gourd v1 genome

Gene IDTan0001084
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:70930102..70931140
RNA-Seq ExpressionTan0001084
SyntenyTan0001084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8384490.1 hypothetical protein BUALT_Bualt04G0123100 [Buddleja alternifolia]2.0e-0540Show/hide
Query:  MASMISKALTSNFS-ESQNLN-------SN---GVVSTHLLLKSPGK-MDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAERLWLQQHD
        MA MISK    +FS ES+ L+       SN   G VS+ L LKS  + +D+D+VLRR+R +K  +++K TF+ L+       +P++  +  E  WLQ  D
Subjt:  MASMISKALTSNFS-ESQNLN-------SN---GVVSTHLLLKSPGK-MDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAERLWLQQHD

Query:  VFSSP
        VF+SP
Subjt:  VFSSP

KGN48470.1 hypothetical protein Csa_003921 [Cucumis sativus]3.4e-2166.67Show/hide
Query:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF
        MA MISKA TS F E++N     L+ N  VS+H+ LKS GKMDRD+VLRRIRFYKR NK+KRT E LVG+G GGSE  NA ADE E+ WLQQHDVF
Subjt:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF

TXG59534.1 hypothetical protein EZV62_014107 [Acer yangbiense]7.0e-0638.05Show/hide
Query:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE
        MA +ISKA TS+FS S +   N                      VST LLL+S    D+  VLRRIR +K   K+K  FEGLV +   +          E
Subjt:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE

Query:  RLWLQQHDVFSSP
        + WL+Q+D FSSP
Subjt:  RLWLQQHDVFSSP

TXG59537.1 hypothetical protein EZV62_014110 [Acer yangbiense]7.0e-0638.05Show/hide
Query:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE
        MA +ISKA TS+FS S +   N                      VST LLL+S  + D++ VLRRIR  K   K+K  FEGLV +   +          E
Subjt:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE

Query:  RLWLQQHDVFSSP
        + WL+Q+D FSSP
Subjt:  RLWLQQHDVFSSP

TYK12932.1 hypothetical protein E5676_scaffold255G005270 [Cucumis melo var. makuwa]2.4e-2267.71Show/hide
Query:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF
        MA +ISKA +S+FSE++N     L+ N  VS+H+LLKS GKMDRD+VLRRIRFYKR NK+KRT E LVG+G GGSE  NA ADEAE+ WLQQHDVF
Subjt:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF

TrEMBL top hitse value%identityAlignment
A0A0A0KFI9 Uncharacterized protein1.7e-2166.67Show/hide
Query:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF
        MA MISKA TS F E++N     L+ N  VS+H+ LKS GKMDRD+VLRRIRFYKR NK+KRT E LVG+G GGSE  NA ADE E+ WLQQHDVF
Subjt:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF

A0A392PKY3 Uncharacterized protein3.7e-0536.79Show/hide
Query:  MASMISKA------LTSNFSESQNLNSNGVVSTHLLLK-------SPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAERLWLQQH
        MA MIS+A      ++ +  E +N  ++  +S+ L LK       S   +D+++VL+RIR +K  N++K  FEGL G          +A   E+ WLQQ 
Subjt:  MASMISKA------LTSNFSESQNLNSNGVVSTHLLLK-------SPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAERLWLQQH

Query:  DVFSSP
        DVFSSP
Subjt:  DVFSSP

A0A5C7HR70 Uncharacterized protein3.4e-0638.05Show/hide
Query:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE
        MA +ISKA TS+FS S +   N                      VST LLL+S  + D++ VLRRIR  K   K+K  FEGLV +   +          E
Subjt:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE

Query:  RLWLQQHDVFSSP
        + WL+Q+D FSSP
Subjt:  RLWLQQHDVFSSP

A0A5C7HRL8 Uncharacterized protein3.4e-0638.05Show/hide
Query:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE
        MA +ISKA TS+FS S +   N                      VST LLL+S    D+  VLRRIR +K   K+K  FEGLV +   +          E
Subjt:  MASMISKALTSNFSESQNLNSN--------------------GVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAE

Query:  RLWLQQHDVFSSP
        + WL+Q+D FSSP
Subjt:  RLWLQQHDVFSSP

A0A5D3CNJ6 Uncharacterized protein1.2e-2267.71Show/hide
Query:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF
        MA +ISKA +S+FSE++N     L+ N  VS+H+LLKS GKMDRD+VLRRIRFYKR NK+KRT E LVG+G GGSE  NA ADEAE+ WLQQHDVF
Subjt:  MASMISKALTSNFSESQN-----LNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAG-GGSESPNAAADEAERLWLQQHDVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATGATTTCCAAAGCTCTAACATCTAATTTCTCAGAATCTCAGAATCTCAACAGCAACGGCGTCGTTTCCACCCACCTCCTCTTGAAATCGCCCGGCAAGAT
GGACAGAGACCTGGTTCTTCGCCGCATTCGTTTCTATAAGCGATTCAACAAACTGAAAAGGACTTTCGAAGGTCTTGTCGGCGCCGGCGGTGGCTCCGAGTCGCCAAATG
CGGCCGCCGATGAGGCAGAGAGGTTGTGGCTGCAGCAGCACGATGTTTTTTCCTCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAACCCACAGAAAACCAAAACAAAACAAAACCCATTAAAATCCCCACACTCTCTTCATTTCATATCCAATTTCTTAAGCTCTCTCTTCTTCAATATCAATACCATCAA
AAATGGCTTCCATGATTTCCAAAGCTCTAACATCTAATTTCTCAGAATCTCAGAATCTCAACAGCAACGGCGTCGTTTCCACCCACCTCCTCTTGAAATCGCCCGGCAAG
ATGGACAGAGACCTGGTTCTTCGCCGCATTCGTTTCTATAAGCGATTCAACAAACTGAAAAGGACTTTCGAAGGTCTTGTCGGCGCCGGCGGTGGCTCCGAGTCGCCAAA
TGCGGCCGCCGATGAGGCAGAGAGGTTGTGGCTGCAGCAGCACGATGTTTTTTCCTCTCCTTAATTAGATTTAAAGGGGATGAGATTCTGGCCTCTTTGCCACTCGATCG
AGAGAATTTAAAAAAAAAAAAAAAAATAGTGATGGAATAAAGGCTGGATTTGGATCAAACTTTGAATACTCACTTCTCCTCTCCAGTTTGGGTGTAAACTATTTTCTTTT
CTTTTCTTTTCTTTTCTTTTTTTATGTAAATGAAAGGCTAAAATATCATTTTGGTCCTTTGAGAATGCCTTCATTTTGGTATTTGTTCTTTCAAATGTCTAATTTATAAT
AATAATTTATATTATTATATGTTATATATTGGGAGGTTTCTCAAAGTGGGATCCTCAACATGCCACTCTCGACAGAATGTCTGTTTGGCTTAATGGACTTTGATACTCTG
TTAGATTATATGAGGTTGTATCTCAAAATCAATGGGTAATGAAAGGAGTAGCTCATATATCTTATATATTGTGAGGTTTCTCTCCACTTCAACATAACCATTGTATAAAT
GATTATCAAACGAGATCTTAACTTTTTGTTTTTGAAAAAGATAGAGAAAAATACTTTTTTAATCTCTTATATTTGATACTTGTGTCTATTTAGTCTCTATGTTTCAAAAT
CGGACAATTAAATCTCTAAATTTAGTTAAATAGTTCTATTAGATCCTTG
Protein sequenceShow/hide protein sequence
MASMISKALTSNFSESQNLNSNGVVSTHLLLKSPGKMDRDLVLRRIRFYKRFNKLKRTFEGLVGAGGGSESPNAAADEAERLWLQQHDVFSSP