; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001103 (gene) of Snake gourd v1 genome

Gene IDTan0001103
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG05:7374953..7376755
RNA-Seq ExpressionTan0001103
SyntenyTan0001103
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.8e-16689.8Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLRQ SS+ SI+P+Q+LQESI+AAVESKSY++LPDLFPSLQEACQNPNPFSFLST PVNFRT VVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGCVP PQT LLLSS WL+QRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPRQGT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+L EGCLEC EYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]7.4e-16289.5Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK GT   SAFLL FHQFLRQYSSIH+ISPSQTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLSTLPVNF TQVVDEILQSLIPLRPRSRP  
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRIL SGCVPAPQT LLLSSAWL+QR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GC+PDLESYGTLI ASTAVRRT EAVELLKEMV+KV+LTPRQGTIINVVAALRANRE+RRAVEIIELLEKESHNVGFESYELL EGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMT++GFIPYIRVRQKVVEGLA +GE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]4.5e-16790.38Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLRQ SS+ SI+P+Q+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLST PVNFRT VVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGCVP PQT LLLSS WL+QRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPRQGT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+L EGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]3.1e-16891.25Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLR  SS+ SI+P+QTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLST PVNFRTQVVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGC P PQT LLLSSAWL+QRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+L EGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]7.6e-16790.38Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLRQ SS+ SI+P+Q+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLST PVNFRT VVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGCVP PQT LLLSS WL+QRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPRQGT+INVVAALRAN E+RRAVEIIELLEKES+NVGFESYE+L EGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein4.0e-15383.09Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        M +G  KTSAFLL FH FL QYSSIHSISPSQTLQ+SIKAAVESKSYKKLPDLFPSLQEAC NPN F FLST P+N RTQVVDEILQSLI +RPRS+  F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRIL SGCVP+PQT  LLSSAWL+QR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GC+PDLESYGTLI A+TAVRRT +AVELLKEMV+KV+L PRQGTI NVVAALR NRE+RRAVEIIELLE++SH+VGFESYELL EGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMT++GFIPYI+VRQ+VVEGLAGIGE ELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein1.4e-15082.8Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        M +G  KTSAFLL FH FL Q SSIHSISPSQTLQ+SIKAAVESKSYKKLP LFPSLQEAC NPN F FLST P+N RTQVVDEILQSLI +RPRS+  F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRIL SGCVP+PQT  LLSSAWL+QR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLI A+TAVRRT +AVELLKEMV+KV+L PRQ TIINVVAALRANRE+RRAVEIIELLE++SH+VGFESYELL EGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        M MT++GFIPYI+VRQKVVEGL GIGE ELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062703.6e-16289.5Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK GT   SAFLL FHQFLRQYSSIH+ISPSQTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLSTLPVNF TQVVDEILQSLIPLRPRSRP  
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRIL SGCVPAPQT LLLSSAWL+QR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GC+PDLESYGTLI ASTAVRRT EAVELLKEMV+KV+LTPRQGTIINVVAALRANRE+RRAVEIIELLEKESHNVGFESYELL EGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMT++GFIPYIRVRQKVVEGLA +GE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062702.2e-16790.38Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLRQ SS+ SI+P+Q+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLST PVNFRT VVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGCVP PQT LLLSS WL+QRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPRQGT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+L EGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062701.5e-16891.25Show/hide
Query:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF
        MK+GTA+TS+FLL+FHQFLR  SS+ SI+P+QTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLST PVNFRTQVVDEILQSLIPLRPRSRP F
Subjt:  MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRIL SGC P PQT LLLSSAWL+QRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV
        GCVPDLESYGTLIS+STAVRRTAEAVELLKEMV+KV+LTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+L EGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVV

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAEL+S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGEPELASAVRRRFAELKS

SwissProt top hitse value%identityAlignment
Q3EDF8 Pentatricopeptide repeat-containing protein At1g099006.4e-0723.28Show/hide
Query:  LRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   +   L   + ++++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  +  G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECR

Query:  EYILAGKVVMGMTEKGFIPYIRVRQKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGFIPYIRVRQKVVEGLA

Q940A6 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic7.0e-0623.96Show/hide
Query:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA
        +L  +  +LL    P       L S   +  + SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS    
Subjt:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA

Query:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV
         ++  EA   L EMV K  L P   T   ++  L    ++  A++  +  ++        +Y ++ +GC +        +    M  K   P   V   +
Subjt:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV

Query:  VEGLAGIGEPELASAVR
        +      G   +A  +R
Subjt:  VEGLAGIGEPELASAVR

Q9FH87 Putative pentatricopeptide repeat-containing protein At5g658201.1e-0624.26Show/hide
Query:  ILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANRE
        +L DMR  G+EP+++    LI +LC +D + EA +V   M    C  D+ +Y  L+S      +  +   +L +M+ K  L P + T ++++ A      
Subjt:  ILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANRE

Query:  MRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG
            +E++E + +  ++     Y ++     +  E   A ++   M E G  P +     ++ GLA  G
Subjt:  MRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062708.1e-9556.47Show/hide
Query:  SISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRI
        SIS  + ++++IK AVE+K Y ++P+L  SL+E  QN   FSFLS    + R +V+DEILQS +P+RPRS P  V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAV
        L SGC+P PQT LLLS AWL +RR S+SVA I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T + V
Subjt:  LLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAV

Query:  ELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++ EGCLE REYILAGKVVM MT++GFIPYI+VRQKVVE L  IG
Subjt:  ELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG

Query:  EPELASAVRRRFAELKS
        E +LA  VR+R +EL+S
Subjt:  EPELASAVRRRFAELKS

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic1.2e-0825Show/hide
Query:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA
        ++ V +R++L G  P+ QT   L    L +RR   SV  +L +M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA

Query:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV
         R+   A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +L +   +   +  A   +  M ++G +P +     +
Subjt:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein5.7e-9656.47Show/hide
Query:  SISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRI
        SIS  + ++++IK AVE+K Y ++P+L  SL+E  QN   FSFLS    + R +V+DEILQS +P+RPRS P  V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAV
        L SGC+P PQT LLLS AWL +RR S+SVA I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T + V
Subjt:  LLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAV

Query:  ELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++ EGCLE REYILAGKVVM MT++GFIPYI+VRQKVVE L  IG
Subjt:  ELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG

Query:  EPELASAVRRRFAELKS
        E +LA  VR+R +EL+S
Subjt:  EPELASAVRRRFAELKS

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.5e-0823.28Show/hide
Query:  LRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   +   L   + ++++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPHFVHASLLFYTLQSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  +  G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECR

Query:  EYILAGKVVMGMTEKGFIPYIRVRQKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGFIPYIRVRQKVVEGLA

AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.0e-0723.96Show/hide
Query:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA
        +L  +  +LL    P       L S   +  + SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS    
Subjt:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA

Query:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV
         ++  EA   L EMV K  L P   T   ++  L    ++  A++  +  ++        +Y ++ +GC +        +    M  K   P   V   +
Subjt:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV

Query:  VEGLAGIGEPELASAVR
        +      G   +A  +R
Subjt:  VEGLAGIGEPELASAVR

AT4G31850.1 proton gradient regulation 38.2e-1025Show/hide
Query:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA
        ++ V +R++L G  P+ QT   L    L +RR   SV  +L +M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTA

Query:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV
         R+   A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +L +   +   +  A   +  M ++G +P +     +
Subjt:  VRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein7.7e-0824.26Show/hide
Query:  ILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANRE
        +L DMR  G+EP+++    LI +LC +D + EA +V   M    C  D+ +Y  L+S      +  +   +L +M+ K  L P + T ++++ A      
Subjt:  ILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVRRTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANRE

Query:  MRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG
            +E++E + +  ++     Y ++     +  E   A ++   M E G  P +     ++ GLA  G
Subjt:  MRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTGGAACAGCAAAGACTTCTGCGTTCTTACTCTATTTCCATCAATTTTTGCGGCAATATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAAAG
CATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTCTCTACTTTGC
CTGTTAACTTCAGAACACAAGTTGTGGATGAGATATTGCAGTCTTTAATCCCTCTCAGACCTCGCTCAAGGCCCCATTTTGTCCATGCCTCTCTGCTTTTCTACACTCTT
CAAAGCCCTTCACCACTTCCCCTCTCTCTTCCAGTCCTCCAGCGCATTCTCCTCTCTGGTTGTGTCCCTGCCCCGCAGACCCGCCTTCTCCTCTCTTCTGCATGGCTAAG
ACAACGTCGCCAGTCTAAGTCTGTTGCTAGCATCTTGTTGGACATGCGGTCAATTGGATATGAGCCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGAGGAGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACCTTAATTAGTGCATCAACAGCAGTTAGA
CGGACAGCTGAGGCAGTGGAATTGCTGAAAGAAATGGTCCTAAAAGTTCAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGA
GATGAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTCGAGAGCTATGAGCTTCTCGCTGAAGGTTGTCTGGAGTGTCGTGAGTATA
TTTTGGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGATTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGGTTGGCTGGTATTGGAGAACCGGAACTT
GCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAAGTCTTAA
mRNA sequenceShow/hide mRNA sequence
CGTCAAAGGCGGCAAAAGCTCTCAATCTTTTTCGTTATAAAATCGAAGAGGCATGAAAGTTGGAACAGCAAAGACTTCTGCGTTCTTACTCTATTTCCATCAATTTTTGC
GGCAATATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAAAGCATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCT
TTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTCTCTACTTTGCCTGTTAACTTCAGAACACAAGTTGTGGATGAGATATTGCAGTCTTTAATCCCTCTCAG
ACCTCGCTCAAGGCCCCATTTTGTCCATGCCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCACTTCCCCTCTCTCTTCCAGTCCTCCAGCGCATTCTCCTCTCTG
GTTGTGTCCCTGCCCCGCAGACCCGCCTTCTCCTCTCTTCTGCATGGCTAAGACAACGTCGCCAGTCTAAGTCTGTTGCTAGCATCTTGTTGGACATGCGGTCAATTGGA
TATGAGCCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGAGGAGCAGGATGCGT
TCCTGACTTGGAGAGTTATGGCACCTTAATTAGTGCATCAACAGCAGTTAGACGGACAGCTGAGGCAGTGGAATTGCTGAAAGAAATGGTCCTAAAAGTTCAATTGACAC
CAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGAGATGAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGA
TTCGAGAGCTATGAGCTTCTCGCTGAAGGTTGTCTGGAGTGTCGTGAGTATATTTTGGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGATTTATACCATATATCAG
GGTCAGGCAAAAGGTTGTTGAGGGGTTGGCTGGTATTGGAGAACCGGAACTTGCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAAGTCTTAAGATACTTTAAATTCTT
TATATCTTTATTTTCAAATATATATTTTGCATCAAAATGGCCTGTGG
Protein sequenceShow/hide protein sequence
MKVGTAKTSAFLLYFHQFLRQYSSIHSISPSQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTLPVNFRTQVVDEILQSLIPLRPRSRPHFVHASLLFYTL
QSPSPLPLSLPVLQRILLSGCVPAPQTRLLLSSAWLRQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISASTAVR
RTAEAVELLKEMVLKVQLTPRQGTIINVVAALRANREMRRAVEIIELLEKESHNVGFESYELLAEGCLECREYILAGKVVMGMTEKGFIPYIRVRQKVVEGLAGIGEPEL
ASAVRRRFAELKS