; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001143 (gene) of Snake gourd v1 genome

Gene IDTan0001143
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG06:25810119..25811050
RNA-Seq ExpressionTan0001143
SyntenyTan0001143
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5221692.1 CTV [Salix suchowensis]1.4e-0629.3Show/hide
Query:  TTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF
        +TW  + G T+ S HPP+ ++Q E  N  V A+P+KL   K++    +K    I LQNN+ N  L T+S+Q+ R+E+  +    +    +    S +   
Subjt:  TTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF

Query:  SAPYFK---VDVGSLIPQLKTKVERFLEEIEKKISHL------YIREPSTSTSQINV
          P FK   +   SL+ Q++     FL++++ ++ +L          P  STS+ NV
Subjt:  SAPYFK---VDVGSLIPQLKTKVERFLEEIEKKISHL------YIREPSTSTSQINV

KYP33784.1 hypothetical protein KK1_045344 [Cajanus cajan]1.4e-0629.53Show/hide
Query:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE
        T  TW+T     + S +PP+ +I+ +  NQ V A+P+K I++  +E +  K I+    Q N++N +L TMS+Q+ RIE++  P       VS    S  +
Subjt:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE

Query:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQIN
            P ++++      +L  + +  +EEI++ +S L + +PS +T  I+
Subjt:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQIN

KYP49055.1 hypothetical protein KK1_029259 [Cajanus cajan]1.4e-0629.66Show/hide
Query:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE
        T  TW+T     + S +PP+ +++ +  NQ V A+P+K I++  +E +  K I+ I  Q N++N +L TMS+Q+ RIE++  P       VS    S  +
Subjt:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE

Query:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST
            P ++++      +L  + +  +EEI++ +S L + +PS +T
Subjt:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST

MCI06861.1 hypothetical protein [Trifolium medium]2.9e-0935.06Show/hide
Query:  WRTARGLTVSSTHPPLESIQF--ESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF
        WRTAR   + S HPPLE+I+    + N  + A+PFK+I   +E+    K I  +  Q NY N+ILYTMSQQ+DR+ EQ+ PD     +  ++        
Subjt:  WRTARGLTVSSTHPPLESIQF--ESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF

Query:  SAPYFKVDVGSLIP----QLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLN
        + P +K ++ S        L    E+  +E+  K+  L IR PSTS   +N ++
Subjt:  SAPYFKVDVGSLIP----QLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLN

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]2.7e-1033.16Show/hide
Query:  VTQTTWRTARGLTVSSTHPPLESIQFES-FNQTVSATPFKLIDQKNEEFNPS-KGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFS
        +TQ +W+T +   V S HPPLE ++F++ + + V A+PFK I +  E+ NP+ K I+ IQ QNNY+NKIL T++ Q++ IE +          +S  + +
Subjt:  VTQTTWRTARGLTVSSTHPPLESIQFES-FNQTVSATPFKLIDQKNEEFNPS-KGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFS

Query:  FQETFSAPYFKVDVGSLIPQLK-----------TKVERFLEEIEKKISHLYIREPSTSTSQINVLNDEEINEMIEQMSSMAIREEDSENQNER
         QE  S+   KVD    IP L+           +K E  + +IE+K+  +     +   S +NV+N+++ N+  E   +   REE   N+ ER
Subjt:  FQETFSAPYFKVDVGSLIPQLK-----------TKVERFLEEIEKKISHLYIREPSTSTSQINVLNDEEINEMIEQMSSMAIREEDSENQNER

TrEMBL top hitse value%identityAlignment
A0A151QU25 Uncharacterized protein (Fragment)4.3e-0626.42Show/hide
Query:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE
        T T W T    T+   +PP   I+F   N  + A+P+K+I++  +E N  K I+ +  Q NY+N +L TMS+Q+ RIE Q      T   ++       +
Subjt:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE

Query:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLNDEEINEM
            P ++ +        ++  ++ +EEI K +  L +++     S +NV+ D  + ++
Subjt:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLNDEEINEM

A0A151QU44 Uncharacterized protein6.6e-0729.53Show/hide
Query:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE
        T  TW+T     + S +PP+ +I+ +  NQ V A+P+K I++  +E +  K I+    Q N++N +L TMS+Q+ RIE++  P       VS    S  +
Subjt:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE

Query:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQIN
            P ++++      +L  + +  +EEI++ +S L + +PS +T  I+
Subjt:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQIN

A0A151S2K0 Uncharacterized protein6.6e-0729.66Show/hide
Query:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE
        T  TW+T     + S +PP+ +++ +  NQ V A+P+K I++  +E +  K I+ I  Q N++N +L TMS+Q+ RIE++  P       VS    S  +
Subjt:  TQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQE

Query:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST
            P ++++      +L  + +  +EEI++ +S L + +PS +T
Subjt:  TFSAPYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST

A0A151TFW5 CCHC-type domain-containing protein3.3e-0628.87Show/hide
Query:  TWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETFS
        TW+T     + S +PP+ +I+ +  N+ V A+P+K I++  +E +  K I+    Q N++N +L TMS+Q+ RIE++  P        S+ N S  +   
Subjt:  TWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETFS

Query:  APYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST
         P ++++      +L  + +  +EEI++ +S L + +PS +T
Subjt:  APYFKVDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTST

A0A392P476 Uncharacterized protein (Fragment)1.4e-0935.06Show/hide
Query:  WRTARGLTVSSTHPPLESIQF--ESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF
        WRTAR   + S HPPLE+I+    + N  + A+PFK+I   +E+    K I  +  Q NY N+ILYTMSQQ+DR+ EQ+ PD     +  ++        
Subjt:  WRTARGLTVSSTHPPLESIQF--ESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETF

Query:  SAPYFKVDVGSLIP----QLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLN
        + P +K ++ S        L    E+  +E+  K+  L IR PSTS   +N ++
Subjt:  SAPYFKVDVGSLIP----QLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACTCAAACTACTTGGAGAACTGCCAGAGGCCTTACAGTAAGCTCAACTCATCCGCCGCTAGAATCAATACAGTTTGAAAGCTTTAATCAAACTGTGTCAGCAAC
TCCATTCAAACTAATTGATCAAAAGAACGAAGAGTTCAACCCCTCCAAAGGAATTAGAGGAATACAACTTCAAAACAACTATGCTAACAAGATTTTGTACACCATGTCTC
AACAAATGGACAGAATAGAAGAACAAACCAGGCCAGATGAGAAGACAAGGTTTGCTGTATCTCTAAACAATTTCTCTTTTCAAGAAACATTTTCAGCTCCATATTTCAAG
GTAGATGTCGGAAGTCTGATCCCCCAGTTGAAGACTAAAGTGGAAAGATTCCTCGAAGAAATAGAGAAAAAGATCTCTCATCTCTATATTAGAGAACCGTCAACGTCAAC
TTCTCAAATCAACGTCTTAAATGACGAAGAAATAAATGAGATGATTGAACAGATGAGTAGCATGGCGATAAGAGAAGAAGACTCTGAAAATCAAAACGAAAGGAAAAGAA
TCCTTAAGCACACTACTGAAAAGGTAGCAGCAGTGAAGGAAGGAATTCACAGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACTCAAACTACTTGGAGAACTGCCAGAGGCCTTACAGTAAGCTCAACTCATCCGCCGCTAGAATCAATACAGTTTGAAAGCTTTAATCAAACTGTGTCAGCAAC
TCCATTCAAACTAATTGATCAAAAGAACGAAGAGTTCAACCCCTCCAAAGGAATTAGAGGAATACAACTTCAAAACAACTATGCTAACAAGATTTTGTACACCATGTCTC
AACAAATGGACAGAATAGAAGAACAAACCAGGCCAGATGAGAAGACAAGGTTTGCTGTATCTCTAAACAATTTCTCTTTTCAAGAAACATTTTCAGCTCCATATTTCAAG
GTAGATGTCGGAAGTCTGATCCCCCAGTTGAAGACTAAAGTGGAAAGATTCCTCGAAGAAATAGAGAAAAAGATCTCTCATCTCTATATTAGAGAACCGTCAACGTCAAC
TTCTCAAATCAACGTCTTAAATGACGAAGAAATAAATGAGATGATTGAACAGATGAGTAGCATGGCGATAAGAGAAGAAGACTCTGAAAATCAAAACGAAAGGAAAAGAA
TCCTTAAGCACACTACTGAAAAGGTAGCAGCAGTGAAGGAAGGAATTCACAGAGGATAA
Protein sequenceShow/hide protein sequence
MVTQTTWRTARGLTVSSTHPPLESIQFESFNQTVSATPFKLIDQKNEEFNPSKGIRGIQLQNNYANKILYTMSQQMDRIEEQTRPDEKTRFAVSLNNFSFQETFSAPYFK
VDVGSLIPQLKTKVERFLEEIEKKISHLYIREPSTSTSQINVLNDEEINEMIEQMSSMAIREEDSENQNERKRILKHTTEKVAAVKEGIHRG