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Tan0001146 (gene) of Snake gourd v1 genome

Gene IDTan0001146
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF126-like
Genome locationLG01:97726869..97729976
RNA-Seq ExpressionTan0001146
SyntenyTan0001146
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605221.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]9.5e-3866.67Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  LAAGN+D NFHI V +D I+ +WVDLDP    E SPA  NGAPASAIERL+ Q+FDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQM NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

XP_022947840.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]1.2e-3764.57Show/hide
Query:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG
        CN +   I+ FA HLAAGN+D NFHI V +D I+ +WVDLDP    E SP   NGAPASAIERL+ Q+FDG   EE G +CSVCC+ L  E+EV+RIPCG
Subjt:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG

Query:  HVYHKSCILTWLQMRNSCPLCRAKLEE
        HVYHK CIL WLQM NSCPLCR KLE+
Subjt:  HVYHKSCILTWLQMRNSCPLCRAKLEE

XP_022947933.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita moschata]7.3e-3866.67Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  LAAGN+D NFHI V +D I+ +WVDLDP    E SPA  NGAPASAIERL+ Q+FDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQM NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

XP_023006826.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita maxima]1.6e-3766.67Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  LAAGN+D NFHI V +D  + +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQM NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

XP_023533113.1 RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo]1.5e-3864.57Show/hide
Query:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG
        CN +   I+ FA HLAAGN+D NFHI V +D I+ +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIPCG
Subjt:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG

Query:  HVYHKSCILTWLQMRNSCPLCRAKLEE
        HVYHK CIL WL+M NSCPLCR +LE+
Subjt:  HVYHKSCILTWLQMRNSCPLCRAKLEE

TrEMBL top hitse value%identityAlignment
A0A6J1ES83 uncharacterized protein LOC1114355048.1e-3563.03Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDPE---DSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCI
        IA FA  LAAG+LDRNFHI V +D +Q +WVDLD +   + P     APAS +ERL  ++FDGF  EE   DCSVCCDEL  E EV R+PCGHV+HKSCI
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDPE---DSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCI

Query:  LTWLQMRNSCPLCRAKLEE
        L WLQ+ NSCPLCRAKLE+
Subjt:  LTWLQMRNSCPLCRAKLEE

A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like3.5e-3866.67Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  LAAGN+D NFHI V +D I+ +WVDLDP    E SPA  NGAPASAIERL+ Q+FDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQM NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

A0A6J1G809 probable E3 ubiquitin-protein ligase RHA4A6.0e-3864.57Show/hide
Query:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG
        CN +   I+ FA HLAAGN+D NFHI V +D I+ +WVDLDP    E SP   NGAPASAIERL+ Q+FDG   EE G +CSVCC+ L  E+EV+RIPCG
Subjt:  CNSL---IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCG

Query:  HVYHKSCILTWLQMRNSCPLCRAKLEE
        HVYHK CIL WLQM NSCPLCR KLE+
Subjt:  HVYHKSCILTWLQMRNSCPLCRAKLEE

A0A6J1KYV1 E3 ubiquitin-protein ligase RNF126-like7.8e-3866.67Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  LAAGN+D NFHI V +D  + +WVDLDP    E SPA  NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQM NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

A0A6J1L387 RING-H2 finger protein ATL16-like2.5e-3664.17Show/hide
Query:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC
        I+ FA  L A N+D NFHI V +D I+ +WVDLDP    E SP   NGAPASAIERL+ QKFDG   EE   DCSVCC+ L  E+EV+RIPCGHVYHK C
Subjt:  IAFFAHHLAAGNLDRNFHINVAIDFIQNLWVDLDP----EDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSC

Query:  ILTWLQMRNSCPLCRAKLEE
        IL WLQ+ NSCPLCR KLE+
Subjt:  ILTWLQMRNSCPLCRAKLEE

SwissProt top hitse value%identityAlignment
O22197 Probable E3 ubiquitin-protein ligase RHC1A2.1e-1142.86Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP SAI+ L   K     L     +C VC DE     E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

P0CH30 E3 ubiquitin-protein ligase RING12.7e-1141.1Show/hide
Query:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        T  A  SAIE L         L    + C+VC D+     E  ++PC H+YHK C+L WL++ NSCP+CR +L
Subjt:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.7e-1141.1Show/hide
Query:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        T  A  SAI+ L   K     L+   + C+VC DE     +V ++PC HV+H+ C+L WL++ NSCP+CR +L
Subjt:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

Q94AK4 E3 ubiquitin-protein ligase RZF13.5e-1141.43Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP S+I+ L   K     L+     C VC DE   + E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

Q9VHI7 E3 ubiquitin-protein ligase Iruka7.9e-1133.77Show/hide
Query:  TNGAPASAIERLKNQKFDGFGLEEVGD--DCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKLEE
        T+G P  + +R+          EEV     CS+C D+   ++ V ++PC H+YH++CI+ WL + ++CP+CR  L +
Subjt:  TNGAPASAIERLKNQKFDGFGLEEVGD--DCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKLEE

Arabidopsis top hitse value%identityAlignment
AT2G40830.1 RING-H2 finger C1A1.5e-1242.86Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP SAI+ L   K     L     +C VC DE     E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

AT2G40830.2 RING-H2 finger C1A1.5e-1242.86Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP SAI+ L   K     L     +C VC DE     E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

AT2G40830.3 RING-H2 finger C1A1.5e-1242.86Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP SAI+ L   K     L     +C VC DE     E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

AT3G19950.1 RING/U-box superfamily protein1.9e-1241.1Show/hide
Query:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        T  A  SAI+ L   K     L+   + C+VC DE     +V ++PC HV+H+ C+L WL++ NSCP+CR +L
Subjt:  TNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL

AT3G56580.2 RING/U-box superfamily protein2.5e-1241.43Show/hide
Query:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL
        AP S+I+ L   K     L+     C VC DE   + E  ++PC H+YH  CI+ WL   NSCP+CR +L
Subjt:  APASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATCAAGCAAGTATGTCTCTTAAAAAAATAGAAAACAAAAACATGAACCGTCTTATTTTTTTTTCTAACACTTTGTTCATCTTTTGCTTCTTCAATTTCTTCAT
ACTCATCATTCTCTTCTCCAATTTTCATCAGCAAAAGGATGATGATTTTGATGTCCCACTTTCAATTGTCATTCACAACAACACAAATACACAACAAAACTTCATGCTTC
ACAAAAATGTCACAATAAGATATAGACAAGGTCATAAGAATCAAGTAGATTCAATCATAACAATTTTACAAAGATGTAATTCTCTAATCGCCTTCTTCGCCCACCACTTG
GCTGCCGGAAACCTCGATCGGAACTTCCACATCAACGTCGCTATCGATTTCATTCAAAATCTATGGGTGGACCTGGACCCAGAAGATTCTCCGGCAGTGACGAATGGGGC
GCCCGCGTCGGCCATTGAGAGACTGAAGAACCAGAAATTCGATGGGTTTGGACTCGAAGAAGTGGGAGATGATTGCAGTGTTTGTTGCGATGAACTTAACGCTGAAAAGG
AGGTGACAAGAATCCCCTGTGGTCACGTGTATCATAAATCATGTATTCTCACTTGGCTTCAGATGAGAAATTCGTGTCCTTTGTGTAGGGCCAAATTAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTATCAAGCAAGTATGTCTCTTAAAAAAATAGAAAACAAAAACATGAACCGTCTTATTTTTTTTTCTAACACTTTGTTCATCTTTTGCTTCTTCAATTTCTTCAT
ACTCATCATTCTCTTCTCCAATTTTCATCAGCAAAAGGATGATGATTTTGATGTCCCACTTTCAATTGTCATTCACAACAACACAAATACACAACAAAACTTCATGCTTC
ACAAAAATGTCACAATAAGATATAGACAAGGTCATAAGAATCAAGTAGATTCAATCATAACAATTTTACAAAGATGTAATTCTCTAATCGCCTTCTTCGCCCACCACTTG
GCTGCCGGAAACCTCGATCGGAACTTCCACATCAACGTCGCTATCGATTTCATTCAAAATCTATGGGTGGACCTGGACCCAGAAGATTCTCCGGCAGTGACGAATGGGGC
GCCCGCGTCGGCCATTGAGAGACTGAAGAACCAGAAATTCGATGGGTTTGGACTCGAAGAAGTGGGAGATGATTGCAGTGTTTGTTGCGATGAACTTAACGCTGAAAAGG
AGGTGACAAGAATCCCCTGTGGTCACGTGTATCATAAATCATGTATTCTCACTTGGCTTCAGATGAGAAATTCGTGTCCTTTGTGTAGGGCCAAATTAGAAGAATGA
Protein sequenceShow/hide protein sequence
MVYQASMSLKKIENKNMNRLIFFSNTLFIFCFFNFFILIILFSNFHQQKDDDFDVPLSIVIHNNTNTQQNFMLHKNVTIRYRQGHKNQVDSIITILQRCNSLIAFFAHHL
AAGNLDRNFHINVAIDFIQNLWVDLDPEDSPAVTNGAPASAIERLKNQKFDGFGLEEVGDDCSVCCDELNAEKEVTRIPCGHVYHKSCILTWLQMRNSCPLCRAKLEE