; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001206 (gene) of Snake gourd v1 genome

Gene IDTan0001206
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionIntraflagellar transport protein
Genome locationLG01:113984577..113985806
RNA-Seq ExpressionTan0001206
SyntenyTan0001206
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]9.9e-6687.58Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        MP+RDWHKN + +E NMS GGGIAAWNVFDNVKTTTKTPEALI EIN AI+NLEYAR+ A+LESPISP PQDRSSG S  TQYD R+ADEAYKAGCAALA
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

KAG7037814.1 hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-5786.23Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        MP+RDWHKN + +E NMS GGGIAAWNVFDNVKTTTKTPEALI EIN AI+NLEYAR+ A+LESPISP PQDRSSG S  TQYD R+ADEAYKAGCAALA
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

XP_011654103.1 uncharacterized protein LOC101212714 [Cucumis sativus]1.7e-5479.22Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL
        MP+R+ HK S+ERE +++  GGIAAWNVFD+VKTTTKTPEAL+ EI AAISNLEYART AYLESPISP  P+D     + R+QYDVRMAD AYKAGC AL
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
         VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]2.9e-6586.93Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        MP+RDWHKN + +E NMS GGGIAAWNVFDNVKTTTKTPEALI EIN AI+NLEYAR+ A+LESPISP PQDRSSG S  TQYD R+ADEAYKAGCAALA
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]1.6e-5580.52Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL
        MP+RDWHKN +E E NM+ G GIAAWNVFDNVKTTTKTPEAL+ EINAAISN EYART A L+SPISP   +D  S  SLRTQY VRMAD +YKAGCAA 
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
         VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS QLQIRSSN  EISED
Subjt:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein8.4e-5579.22Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL
        MP+R+ HK S+ERE +++  GGIAAWNVFD+VKTTTKTPEAL+ EI AAISNLEYART AYLESPISP  P+D     + R+QYDVRMAD AYKAGC AL
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISP-APQDRSSGTSLRTQYDVRMADEAYKAGCAAL

Query:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
         VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  AVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A1S3BU07 uncharacterized protein LOC1034935312.7e-5376.47Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        M +R+WHK S+ RE +++  GGI  WNVFDNVKTTTKTPEAL+ EINAAISNLEY RTAAYLESPIS  P+D     + R+QYDVR+AD AYKAGC AL 
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A5A7VF87 Uncharacterized protein2.7e-5376.47Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        M +R+WHK S+ RE +++  GGI  WNVFDNVKTTTKTPEAL+ EINAAISNLEY RTAAYLESPIS  P+D     + R+QYDVR+AD AYKAGC AL 
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1BP49 uncharacterized protein LOC1110261681.6e-5075.82Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        MP RD  KN +ERE N+   GGI AWN FDNV  TTKTPEAL+ EINAAIS +EYART A LES   PA QD  SG SL  QYD RMADEAYKAGCAALA
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLD+ALHSLNVSLSKCPPEK+SAVAKL SLI+LTSQQL  RSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1FLM9 uncharacterized protein LOC1114463521.4e-6586.93Show/hide
Query:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA
        MP+RDWHKN + +E NMS GGGIAAWNVFDNVKTTTKTPEALI EIN AI+NLEYAR+ A+LESPISP PQDRSSG S  TQYD R+ADEAYKAGCAALA
Subjt:  MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAACGAGATTGGCATAAGAATTCGGAAGAAAGGGAGAAGAATATGAGTTGCGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAAACCACAACGAA
GACGCCTGAAGCTCTTATCACGGAGATCAATGCTGCAATTTCAAATCTCGAATATGCTCGAACCGCGGCTTACTTAGAATCTCCAATTTCTCCAGCTCCACAAGATAGGA
GCTCTGGTACGAGTTTAAGAACTCAGTATGATGTTCGAATGGCGGATGAAGCGTACAAGGCAGGCTGTGCGGCATTGGCTGTTGGTAAACTTGATGAAGCTCTTCATTCG
TTGAATGTTTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAGCAACTCCAGATCAGATCTTCCAATTG
CCATGAAATTTCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
CAGTCGTTCTTTCTTGTTAGTGTGGTTTTTTCATTTTTCTTTTTTAATCGTGCAGTTTTCTCAAAGCTCAAAATCCTCGCAAGGGATACAATTCAGAAAATTCCTCTTCA
AAGAAGTAGTTGATTGGATTCAGATTCAAGTTCGAGATGTTGACGAAAGCAATTGCTCTCCGTTGAACCCGTGAGGATCGGAGAATCGGATTCGACGTATCGTTTTCAAA
GAAATATCTGATTTGTATTTGAATTTCGGCGCCATGGACTTGTTTTAAGCTATCGATCCAATTTGTTATCAGTTTGAGCGGCAAGGTGTTTGTGAAAATGCCTGAACGAG
ATTGGCATAAGAATTCGGAAGAAAGGGAGAAGAATATGAGTTGCGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAAACCACAACGAAGACGCCTGAAGCT
CTTATCACGGAGATCAATGCTGCAATTTCAAATCTCGAATATGCTCGAACCGCGGCTTACTTAGAATCTCCAATTTCTCCAGCTCCACAAGATAGGAGCTCTGGTACGAG
TTTAAGAACTCAGTATGATGTTCGAATGGCGGATGAAGCGTACAAGGCAGGCTGTGCGGCATTGGCTGTTGGTAAACTTGATGAAGCTCTTCATTCGTTGAATGTTTCTC
TTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAGCAACTCCAGATCAGATCTTCCAATTGCCATGAAATTTCA
GAAGATTGAACGCCTTTTAATTTCGTTGTGAAAGTTAAAGATTGCCTGGTTTCAATATGTTCTCTTAATCTCTTCCCCTCAAATTTTTCTTCTCGGAATTGAATCCCTCG
CGTTGTCCCTAGTTTGACCGTGTGAATACTTTTTTTTTTGTTTGAATAATGGTCTTTTTGTTTCCC
Protein sequenceShow/hide protein sequence
MPERDWHKNSEEREKNMSCGGGIAAWNVFDNVKTTTKTPEALITEINAAISNLEYARTAAYLESPISPAPQDRSSGTSLRTQYDVRMADEAYKAGCAALAVGKLDEALHS
LNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED