; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001234 (gene) of Snake gourd v1 genome

Gene IDTan0001234
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 4
Genome locationLG03:60365729..60366155
RNA-Seq ExpressionTan0001234
SyntenyTan0001234
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3162.71Show/hide
Query:  KLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERV
        KLCL L ++VV   P  S            Y APD+AFFGG  PA ++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRKR R+
Subjt:  KLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERV

Query:  NPYRRGCSALTGCARFLD
        NPYRRGC+A+TGCARF D
Subjt:  NPYRRGCSALTGCARFLD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]6.7e-3363.11Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLCL L ++VV   P  S            Y APD+AFFGG  PA ++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRK
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

XP_022989015.1 protein RALF-like 4 [Cucurbita maxima]1.1e-3056.2Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        M  MK+CLFL ++  VV P S AF E++ D +       ++FFGG +   M+E  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+KR
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

XP_023531888.1 protein RALF-like 4 [Cucurbita pepo subsp. pepo]8.1e-3157.02Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKLC+FL ++ VVV P S AF E++   +       ++FFGG +   M+E  R  LFQYG+     +RK+ LSYYAL KNNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]1.3e-3159.5Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKLCLFL ++V  V+P S A+     DW  AYGAP++AF+G  TP    E  R LLFQYG+   KY R +YLSY ALRKNN+PCG RG SYYDC + 
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
        ++ NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

TrEMBL top hitse value%identityAlignment
A0A6J1EBL1 protein RALF-like 313.2e-3363.11Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLCL L ++VV   P  S            Y APD+AFFGG  PA ++E GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCRK
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

A0A6J1EI16 protein RALF-like 193.3e-3055.37Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKL +F+ ++ VV  P S A  E++   +       ++FFGG +   M+E  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

A0A6J1EIU0 protein RALF-like 43.3e-3055.74Show/hide
Query:  MGLMKLCLF-LFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        M  +KLCLF LFV+ VV  P S A+ E++ D +       ++FFGG +   M+E  R  LFQYG+   K +R+++L+YYAL KNNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCLF-LFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCSALTGCARFLD
        R R+NPYRRGC+A+TGCARF D
Subjt:  RERVNPYRRGCSALTGCARFLD

A0A6J1JL71 protein RALF-like 45.2e-3156.2Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        M  MK+CLFL ++  VV P S AF E++ D +       ++FFGG +   M+E  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+KR
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
         R+NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

A0A6J1JN66 protein RALF-like 42.0e-3056.2Show/hide
Query:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR
        MG MKL +FL ++ VVV P S A  E++   +      +++FFGG +   M+E  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+KR
Subjt:  MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKR

Query:  ERVNPYRRGCSALTGCARFLD
          +NPYRRGC+A+TGCARF D
Subjt:  ERVNPYRRGCSALTGCARFLD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 195.0e-1569.39Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGCS +T C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Q8L9P8 Protein RALF-like 331.1e-1163.04Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Q945T0 Rapid alkalinization factor3.3e-1162.22Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGC
        KKY+SY AL+KN++PC RRG+SYY+C+   + NPY RGCSA+T C
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGC

Q9FZA0 Protein RALF-like 44.2e-1466.67Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGCSA+T C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF

Q9LUS7 Rapid alkalinization factor 231.1e-1161.7Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 43.0e-1566.67Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGCSA+T C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCARF

AT2G33775.1 ralf-like 193.5e-1669.39Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGCS +T C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

AT3G05490.1 ralf-like 223.1e-1234.86Show/hide
Query:  LFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRG
        +  IV+     +  F +S  D+ RA  +  F+   G     ++E    + F         ++KKY+SY A+R+N++PC RRG+SYY+C++  + NPY RG
Subjt:  LFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRG

Query:  CSALTGCAR
        CS +T C R
Subjt:  CSALTGCAR

AT3G16570.1 rapid alkalinization factor 238.2e-1361.7Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR

AT4G15800.1 ralf-like 338.2e-1363.04Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGCSA+T C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCSALTGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGATGAAGCTCTGCCTATTTCTCTTCGTCATTGTCGTCGTTGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGATTGGGCTCGGGCCTACGGTGC
TCCAGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGGGATGAGCGAACATGGTCGACATCTACTTTTTCAATACGGATACGACACGACGAAGTACTCTCGTAAGAAGT
ATTTGAGTTACTATGCACTTAGGAAAAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTACCGTCGTGGTTGC
AGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA
mRNA sequenceShow/hide mRNA sequence
AAAATTTCTCATCCATTTTCGCAAACACTTTCACTTGAGGCAGTAGCACCACCAATCCAAAATGGGATTGATGAAGCTCTGCCTATTTCTCTTCGTCATTGTCGTCGTTG
TCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGATTGGGCTCGGGCCTACGGTGCTCCAGATTTTGCCTTCTTTGGTGGACTCACACCTGCCGGGATGAGCGAA
CATGGTCGACATCTACTTTTTCAATACGGATACGACACGACGAAGTACTCTCGTAAGAAGTATTTGAGTTACTATGCACTTAGGAAAAACAACATACCTTGTGGTCGTCG
TGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTACCGTCGTGGTTGCAGTGCCTTAACCGGTTGCGCTCGGTTCCTCGATTAA
Protein sequenceShow/hide protein sequence
MGLMKLCLFLFVIVVVVTPHSSAFPESTKDWARAYGAPDFAFFGGLTPAGMSEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGC
SALTGCARFLD