CuGenDBv2

Gene ID	Tan0001238
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Genome location	LG07:65484305..65486342
RNA-Seq Expression	Tan0001238
Synteny	Tan0001238
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3444518.1 hypothetical protein FNV43_RR14210 [Rhamnella rubrinervis]

5.4e-50

53.99

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRTY ILPSP+NP  P   F+ + DSPPTAGLF KV  +PTNHSKFTGKCGRPRC+GCHMHP CK+K+KTKGT K++S DV  N RLV+W
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLW-------DD---------------YGDCDEDDHSDLEDLQIKN---NREGSG-----DDDEMGFCHVEFILDPV
        RVV+   + GLN    SA+GI++ L        DD               YGD D D     + ++ K    N +G G     DDD M FC+V F LD V
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLW-------DD---------------YGDCDEDDHSDLEDLQIKN---NREGSG-----DDDEMGFCHVEFILDPV

Query:  AEDDQEWCLVGEM
         E+D++WCLVGEM
Subjt:  AEDDQEWCLVGEM

KAF3957464.1 hypothetical protein CMV_017528 [Castanea mollissima]

1.4e-50

53.59

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        M+REGRQHGMVRTY ILPS +NP  P+   +N+ DSPPTAGLF KVP +PTNHSKFTGKCG P C+GCH HP  K+KNK KGTHKL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDD------------YGDCDEDDH-----------SDLEDLQIKNNREGSG---DDDEMGFCHVEFILDPVAEDD
        RV+D  P  GLN    SA+GI+DHL++D            Y D +E+DH            +  +++IK + +  G   DDD+M FC V F+LD  AE D
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDD------------YGDCDEDDH-----------SDLEDLQIKNNREGSG---DDDEMGFCHVEFILDPVAEDD

Query:  QEWCLVGEM
        + WCLV EM
Subjt:  QEWCLVGEM

XP_002526938.1 uncharacterized protein LOC8260322 [Ricinus communis]

2.6e-52

60.33

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRT RILPSP NP  P + FIN  DSPPTAGLF KV P PTNHSKFTGKCG+PRC+GCHMHP CK+K+KTKGT KL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLEDLQIKNNREGSGDD-DEMGFCHVEFILDPVAEDDQEWCLVGEM
        RVVD  P  GLN    SAS I+DH+ DD    D+DD+ +     + +  +   DD D+  +C V F+LD V E D++WCLV E+
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLEDLQIKNNREGSGDD-DEMGFCHVEFILDPVAEDDQEWCLVGEM

XP_021669156.1 uncharacterized protein LOC110656602 [Hevea brasiliensis]

3.2e-50

56.19

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        M+REGRQHGMVRTYRILPSP NP  P + F N  DSPPTAGLFAKV P PTNHSKFTGKC RPRC+GCH+HP CK+K+KTKGT KL+S DV+ N RL++W
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHL--WDDYGDCDEDDHSDL-------------EDLQI-----------KNNREG-SGDDDEMGFCHVEFILDPVAED
        R+VD  P  GLN   +SA+GI++HL   DDY D D D   D              E +QI           K+NRE   GDDD + FC V F++D + E 
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHL--WDDYGDCDEDDHSDL-------------EDLQI-----------KNNREG-SGDDDEMGFCHVEFILDPVAED

Query:  DQEWCLVGEM
        D  WCLV EM
Subjt:  DQEWCLVGEM

XP_030956122.1 uncharacterized protein LOC115978242 [Quercus lobata]

1.7e-51

54.07

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRTYRILPS +NP  P+   +N+ DSP TAGLF KVP +PTNHSKFTGKCG P C+GCH HP CK+KNKTKGT KL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDD----HSDLE-------------------DLQIK---NNREGSGDDDEMGFCHVEFILDPVAEDD
        RV+D  P  GLN    SA+GI+DHL++D+ + D+DD    +SD+                    +++IK   + +    DDD+M FC V F+LD  AE D
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDD----HSDLE-------------------DLQIK---NNREGSGDDDEMGFCHVEFILDPVAEDD

Query:  QEWCLVGEM
        + WCLV EM
Subjt:  QEWCLVGEM

TrEMBL top hits

e value

%identity

Alignment

A0A067LND4 Uncharacterized protein

1.7e-49

56.04

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRTYRILPSP NP  P++ FIN  +SPPTAG F KV   PTNHSKFTGKCG+PRC+ CHM+P CK+K+KTKG HKL+S+D + NCRL++W
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLW----DDYGDCDEDDHSD------LEDLQ-------IKNNRE-------GSGD-DDEMGFCHVEFILDPVAEDDQ
        RVVD  P  GLN    SAS I++ L     DDY D D DD  D      LED         + NN +       G GD DD M FC V F+LD V  +D+
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLW----DDYGDCDEDDHSD------LEDLQ-------IKNNRE-------GSGD-DDEMGFCHVEFILDPVAEDDQ

Query:  EWCLVGE
         WCLV E
Subjt:  EWCLVGE

A0A2N9F7S7 Uncharacterized protein

4.9e-49

51.43

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRTYRILPSP+NP  P+   IN+ + P TAGLF KVP +PTNHSKFTGKCG   C+GCH+HP CK+KNKTKGTHKL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLE---------------------------DLQIKNNREGSGDDDEMGFCHVEFILDPVAED
        RV+D  P  GLNL   SA+ I+  L+ D+ + D+D+  + E                           +++  ++ +  GDDD+M FC V F+LD V E 
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLE---------------------------DLQIKNNREGSGDDDEMGFCHVEFILDPVAED

Query:  DQEWCLVGEM
        D+ WCLV EM
Subjt:  DQEWCLVGEM

A0A6P3ZZJ3 uncharacterized protein LOC107415209

7.6e-50

55.45

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRT+RILPS +NP  P   F+NE D PPTAGLF KV  +PTNHSKFTGKC + RC+GCHMHPVCKAK+KTKGT KLRS DV  N RLVSW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLW-DDYGDCDEDDH---------------------------SDLEDLQIKNNREGSGDDDEMGFCHVEFILDPVAE
        RVV+   R GLN    SASGI+D L  DD GD D D+H                           SD +D +  N+     DDD + +C+V F++D  AE
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLW-DDYGDCDEDDH---------------------------SDLEDLQIKNNREGSGDDDEMGFCHVEFILDPVAE

Query:  DDQEWCLVGEM
         D++WCLVGEM
Subjt:  DDQEWCLVGEM

A0A7N2KZQ0 Uncharacterized protein

8.1e-52

54.07

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRTYRILPS +NP  P+   +N+ DSP TAGLF KVP +PTNHSKFTGKCG P C+GCH HP CK+KNKTKGT KL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDD----HSDLE-------------------DLQIK---NNREGSGDDDEMGFCHVEFILDPVAEDD
        RV+D  P  GLN    SA+GI+DHL++D+ + D+DD    +SD+                    +++IK   + +    DDD+M FC V F+LD  AE D
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDD----HSDLE-------------------DLQIK---NNREGSGDDDEMGFCHVEFILDPVAEDD

Query:  QEWCLVGEM
        + WCLV EM
Subjt:  QEWCLVGEM

B9SLR9 Uncharacterized protein

1.3e-52

60.33

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREGRQHGMVRT RILPSP NP  P + FIN  DSPPTAGLF KV P PTNHSKFTGKCG+PRC+GCHMHP CK+K+KTKGT KL+S+DV  N RL+SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLEDLQIKNNREGSGDD-DEMGFCHVEFILDPVAEDDQEWCLVGEM
        RVVD  P  GLN    SAS I+DH+ DD    D+DD+ +     + +  +   DD D+  +C V F+LD V E D++WCLV E+
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDHSDLEDLQIKNNREGSGDD-DEMGFCHVEFILDPVAEDDQEWCLVGEM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G41730.1 unknown protein

3.3e-13

38.69

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MK EGR  G+VRT  I P   NP        N  DSPP  G F KVP + TNHS  TG+  R + S CH+ P  K+ +K+KG  KL+           SW
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDH
           D   RL +     SA  I+D L  +    D D+H
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYGDCDEDDH

AT5G24640.1 unknown protein

2.5e-13

37.98

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MK EGR  G+VRT  I P   NP        N  DSPP  G F K+ P+ TNHS   G+  R + S CH+ P  K+ +K+KG  KL+        +L   
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDY
        R++ SD     ++ DM  S   DH  D+Y
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDY

AT5G40690.1 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247)

2.6e-42

47.39

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Query:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW
        MKREG+QHGMVRTYRILP  +NP  P++  +N   S PTAGLF KV  +PTNHSKFTGKCG+ RC  CHMHPV K+K KTKG+ K+R+ DV+   ++++W
Subjt:  MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSW

Query:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYG---DCDEDDHSDLED---------LQIKNN-------REGSGDDDE-------MGFCHV--EFILDPVAE
        +V    PR GL L   SA+GI+D + DDYG   D D D+ ++ E+         + I+++        EGS DDD+       M FC V    ++D V E
Subjt:  RVVDSDPRLGLNLFDMSASGIVDHLWDDYG---DCDEDDHSDLED---------LQIKNN-------REGSGDDDE-------MGFCHV--EFILDPVAE

Query:  DDQEWCLVGEM
         D+ W LV EM
Subjt:  DDQEWCLVGEM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGAGAGAAGGCCGGCAACACGGCATGGTCAGAACCTACCGGATTCTCCCGTCGCCGGTCAACCCTGGCGGCCCCAAGAACTGGTTCATCAATGAGTCCGATTCGCC
TCCGACGGCTGGATTGTTCGCCAAAGTCCCGCCCGAGCCGACCAACCACTCCAAGTTCACCGGAAAGTGCGGTCGCCCGCGCTGCTCCGGCTGCCACATGCATCCGGTTT
GTAAGGCTAAGAACAAGACCAAAGGCACTCACAAACTCCGATCGTACGACGTGAGTGTCAATTGTCGACTAGTCAGCTGGCGAGTCGTAGATTCGGACCCGCGGCTCGGG
TTGAATCTGTTCGACATGTCGGCCTCCGGGATCGTGGATCACCTGTGGGATGATTATGGGGATTGCGATGAGGACGACCATTCTGATTTGGAAGATTTGCAAATCAAGAA
TAATAGGGAGGGAAGTGGTGATGACGATGAAATGGGCTTCTGCCACGTGGAGTTTATTCTGGACCCTGTTGCAGAGGATGACCAAGAATGGTGTTTAGTGGGTGAAATGC
ATAAATTATAA

mRNA sequence

Show/hide mRNA sequence

TTCTTGGGCAACAAGTTACCCAATTCATTCCCTTCCTTCTTAAGCTTAATTCTTCCTTTTTCATTTTCTTTATATATTCAATCTGAGAGAGAGATCTGACCCACTCGCCG
GAAAATTAAAAAATGAAGAGAGAAGGCCGGCAACACGGCATGGTCAGAACCTACCGGATTCTCCCGTCGCCGGTCAACCCTGGCGGCCCCAAGAACTGGTTCATCAATGA
GTCCGATTCGCCTCCGACGGCTGGATTGTTCGCCAAAGTCCCGCCCGAGCCGACCAACCACTCCAAGTTCACCGGAAAGTGCGGTCGCCCGCGCTGCTCCGGCTGCCACA
TGCATCCGGTTTGTAAGGCTAAGAACAAGACCAAAGGCACTCACAAACTCCGATCGTACGACGTGAGTGTCAATTGTCGACTAGTCAGCTGGCGAGTCGTAGATTCGGAC
CCGCGGCTCGGGTTGAATCTGTTCGACATGTCGGCCTCCGGGATCGTGGATCACCTGTGGGATGATTATGGGGATTGCGATGAGGACGACCATTCTGATTTGGAAGATTT
GCAAATCAAGAATAATAGGGAGGGAAGTGGTGATGACGATGAAATGGGCTTCTGCCACGTGGAGTTTATTCTGGACCCTGTTGCAGAGGATGACCAAGAATGGTGTTTAG
TGGGTGAAATGCATAAATTATAATAATCTGTATTATAATAACCTGTGAACTACACTCTAGATACAAATTATTATAACCTCATATTAAATCAATCTGCATTTTAAATAATA
TTATATAATTTCACAGAC

Protein sequence

Show/hide protein sequence

MKREGRQHGMVRTYRILPSPVNPGGPKNWFINESDSPPTAGLFAKVPPEPTNHSKFTGKCGRPRCSGCHMHPVCKAKNKTKGTHKLRSYDVSVNCRLVSWRVVDSDPRLG
LNLFDMSASGIVDHLWDDYGDCDEDDHSDLEDLQIKNNREGSGDDDEMGFCHVEFILDPVAEDDQEWCLVGEMHKL

Tan0001238 (gene) of Snake gourd v1 genome