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Tan0001265 (gene) of Snake gourd v1 genome

Gene IDTan0001265
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:75295946..75296215
RNA-Seq ExpressionTan0001265
SyntenyTan0001265
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]6.2e-0443.64Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV
        +TDASWS ++E GGIGWI+ D    ++  G+  IR    I  LEL  I++GL+ +
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.1e-0436.36Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV
        + DASWS     GGIGWI+R W+  ++  G++ + +   + +LE   I++GLR++
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132163.0e-0443.64Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV
        +TDASWS ++E GGIGWI+ D    ++  G+  IR    I  LEL  I++GL+ +
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X15.2e-0442.11Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSVRK
        +TDA+W +     GIGWI+RD +  +I TG + IR+   I  LE+  I +GLR++R+
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSVRK

A0A6J1DNV9 uncharacterized protein LOC1110224031.0e-0436.36Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV
        + DASWS     GGIGWI+R W+  ++  G++ + +   + +LE   I++GLR++
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSV

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X25.2e-0442.11Show/hide
Query:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSVRK
        +TDA+W +     GIGWI+RD +  +I TG + IR+   I  LE+  I +GLR++R+
Subjt:  STDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSVRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCCAAAACCCTCCCCAACATAGGAACCCTCCGACTCAGGGTTGGTGGAGTCTTTAGCACGGATGCTTCTTGGAGCTCAAAGAAGGAAAATGGAGGTATTGGTTG
GATTGTACGAGACTGGGAAAGTCGTTTGATCTGCACAGGTCATAAGCATATCAGATCACATTGGCCTATTTTGGTGTTGGAACTGGAGGGGATAGTTAAGGGGTTGAGAT
CAGTACGGAAATCACGATTTTCCTTTATTGGTCGAATCAGATTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCCAAAACCCTCCCCAACATAGGAACCCTCCGACTCAGGGTTGGTGGAGTCTTTAGCACGGATGCTTCTTGGAGCTCAAAGAAGGAAAATGGAGGTATTGGTTG
GATTGTACGAGACTGGGAAAGTCGTTTGATCTGCACAGGTCATAAGCATATCAGATCACATTGGCCTATTTTGGTGTTGGAACTGGAGGGGATAGTTAAGGGGTTGAGAT
CAGTACGGAAATCACGATTTTCCTTTATTGGTCGAATCAGATTCTCTTGA
Protein sequenceShow/hide protein sequence
MRAKTLPNIGTLRLRVGGVFSTDASWSSKKENGGIGWIVRDWESRLICTGHKHIRSHWPILVLELEGIVKGLRSVRKSRFSFIGRIRFS