; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001271 (gene) of Snake gourd v1 genome

Gene IDTan0001271
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG10:46071352..46071573
RNA-Seq ExpressionTan0001271
SyntenyTan0001271
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

A0A5A7TU93 Gag/pol protein1.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

A0A5A7TWB9 Gag/pol protein1.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

A0A5A7V4M1 Gag/pol protein1.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

A0A5D3CPJ6 Gag/pol protein1.8e-2375.34Show/hide
Query:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL
        M+SL EMFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM HFN+ EMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTTGCATGAAATGTTTGGACAACGGTCCTTTCAGGTCCGACATGACTCGCTCAAATACATCTTCAATGCACGGATGAAGGAGGGGTCGTCTGTCCGTGAACA
TGTTCTAGACATGATGACCCACTTTAATCTGGTTGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGTTTCCTTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTTGCATGAAATGTTTGGACAACGGTCCTTTCAGGTCCGACATGACTCGCTCAAATACATCTTCAATGCACGGATGAAGGAGGGGTCGTCTGTCCGTGAACA
TGTTCTAGACATGATGACCCACTTTAATCTGGTTGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGTTTCCTTT
AG
Protein sequenceShow/hide protein sequence
MESLHEMFGQRSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTHFNLVEMNGASIDESSQVSFILETLPKSFL