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Tan0001274 (gene) of Snake gourd v1 genome

Gene IDTan0001274
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationLG02:3510986..3513051
RNA-Seq ExpressionTan0001274
SyntenyTan0001274
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459321.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]2.5e-3590.53Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAIFRSSSGK ATLLSAGARAAPARSPFRIASKRPFS  S R+P+EMSFC+ESMLPFHSATSSALMTSMLSVS HSYGWLSEV+GLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

XP_022969309.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]3.3e-3590.53Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAI RSS G+AATLLS G+RAAPARS FRIASKRPFSQC+VR+PVEMSFC+ESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]3.9e-3692.63Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAI RSS GKAATLLS GARAAPARSPFRIASKRP SQC+VR+PVEMSFC+ESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.6e-3793.68Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFA RAIFRSSSGKAATLLS GARAAPARSPFRIASKRPFSQCSVR+PVEMSFC+ESMLPFHSATSSALM SMLSVSRH+YGWLSEVTGLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]2.1e-3490.32Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQ
        MASFA RAIFRSSSGKAATLLS GARAAPARSPFRIASKRPFSQCSVR+PVEMSFC+ESMLPFHSATSSALM SMLSVSRH+YGWLSE   LQ
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQ

TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.2e-3590.53Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAIFRSSSGK ATLLSAGARAAPARSPFRIASKRPFS  S R+P+EMSFC+ESMLPFHSATSSALMTSMLSVS HSYGWLSEV+GLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 65.6e-3389.13Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL
        MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFS  S R+P+EMSFC+ESMLPFHSATSSALMTSMLSVS HSYGWLSE   L
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 67.4e-3392.05Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFS  S R+P+EMSFC+ESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.3e-3489.47Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAI RSS GKAATLLS G+RAAPARS FRIA+KRPFSQC+VR+PVEMS C+ESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.6e-3590.53Show/hide
Query:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAI RSS G+AATLLS G+RAAPARS FRIASKRPFSQC+VR+PVEMSFC+ESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial5.8e-1148.84Show/hide
Query:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    FR  ++R      +R PVE+SFC+ES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.1e-1147.13Show/hide
Query:  AARAIFRSSSGKAATL---LSAGARAAP--ARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     SAG +  P  AR+ FR+  + P +    R PVE+S C+E+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSAGARAAP--ARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWL

AT1G28395.2 unknown protein2.1e-1147.13Show/hide
Query:  AARAIFRSSSGKAATL---LSAGARAAP--ARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     SAG +  P  AR+ FR+  + P +    R PVE+S C+E+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSAGARAAP--ARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWL

AT2G20585.1 nuclear fusion defective 64.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    FR  ++R      +R PVE+SFC+ES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.2 nuclear fusion defective 64.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    FR  ++R      +R PVE+SFC+ES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.3 nuclear fusion defective 64.2e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    FR  ++R      +R PVE+SFC+ES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSAGARAAPARSP---FRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCAACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCTGCTCGTTCACCATTTCGCATTGC
TTCTAAACGACCTTTCTCTCAGTGTTCTGTCAGGGTTCCAGTTGAAATGAGCTTCTGTATGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCAGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGCTGGCTTTCAGAGGTGACTGGCTTGCAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCAACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCTGCTCGTTCACCATTTCGCATTGC
TTCTAAACGACCTTTCTCTCAGTGTTCTGTCAGGGTTCCAGTTGAAATGAGCTTCTGTATGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCAGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGCTGGCTTTCAGAGGTGACTGGCTTGCAAACTTCATGA
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSQCSVRVPVEMSFCMESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS