; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001295 (gene) of Snake gourd v1 genome

Gene IDTan0001295
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein arv1 homolog
Genome locationLG10:392112..394501
RNA-Seq ExpressionTan0001295
SyntenyTan0001295
Gene Ontology termsGO:0006665 - sphingolipid metabolic process (biological process)
GO:0016125 - sterol metabolic process (biological process)
GO:0032366 - intracellular sterol transport (biological process)
GO:0097036 - regulation of plasma membrane sterol distribution (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032541 - cortical endoplasmic reticulum (cellular component)
InterPro domainsIPR007290 - Arv1 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437752.1 PREDICTED: protein arv1 homolog isoform X1 [Cucumis melo]1.4e-4188.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

XP_008437754.1 PREDICTED: protein arv1 homolog isoform X2 [Cucumis melo]1.4e-4188.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

XP_008437755.1 PREDICTED: protein arv1 homolog isoform X3 [Cucumis melo]1.4e-4188.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

XP_008437757.1 PREDICTED: protein arv1 homolog isoform X5 [Cucumis melo]1.4e-4188.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

XP_038893484.1 protein ARV 2-like [Benincasa hispida]9.8e-4390.53Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        M RETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVAD+YIECE+MI+L+DLILHK QAYRHLLYNLLDR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

TrEMBL top hitse value%identityAlignment
A0A0A0L5K8 Uncharacterized protein1.2e-4187.37Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MGRETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECE MI+L+DLILHK QAYRHLLYN  DR+RLS +DLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

A0A1S3AUE9 protein arv1 homolog isoform X56.9e-4288.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

A0A1S3AVC0 protein arv1 homolog isoform X36.9e-4288.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

A0A1S3AVD2 protein arv1 homolog isoform X26.9e-4288.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

A0A1S4DSU3 protein arv1 homolog isoform X16.9e-4288.42Show/hide
Query:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA
        MG ETNGNRCVQCGFRT+QLFVLYSPGNMHLMKCDNCKSVAD+YIECEVMI+L+DLILHK QAYRHLLYN  DR+RLS QDLMWK GLSFLLLDA
Subjt:  MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDA

SwissProt top hitse value%identityAlignment
Q54GD9 Protein arv1 homolog8.7e-1042.19Show/hide
Query:  CVQCGFRTNQLFVLY---SPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYN
        C++CG   N ++  +     GN+ L +C +C   AD Y+E + +I+ +DL LHK QAYRHLL+N
Subjt:  CVQCGFRTNQLFVLY---SPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYN

Q5MK23 Protein ARV 22.3e-2657.65Show/hide
Query:  CVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD
        CV+CG +   LF+ YSPGN  LMKC+NC+ VAD+Y+ECE++I+ IDLILHK +AYRHLLYN+++++  + Q L+WK  L++LLLD
Subjt:  CVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD

Q5MK24 Protein ARV 12.5e-2558.62Show/hide
Query:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD
        +RCV CGFR   LF+ YSPGN+ LMKC NCK VAD+YIECE MI+ IDLILH+ + YRH+LYN ++   ++ Q L+WK   ++LLLD
Subjt:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD

Q9D0U9 Protein ARV13.7e-0841.94Show/hide
Query:  RCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYN
        RC++C     +L+  YS G + +  C +C+   D YIE + +I+LI+ IL K QAYRH+L+N
Subjt:  RCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYN

Q9HDX5 Protein arv11.0e-1046.97Show/hide
Query:  RCVQCGFRTNQLFVLYSPG--NMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLL
        +CV+CG   + L+  Y  G  N+ L +C NCK  AD YIE +V+++ +D+IL K Q YRHLL+N L
Subjt:  RCVQCGFRTNQLFVLYSPG--NMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLL

Arabidopsis top hitse value%identityAlignment
AT1G01020.1 Arv1-like protein1.8e-2658.62Show/hide
Query:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD
        +RCV CGFR   LF+ YSPGN+ LMKC NCK VAD+YIECE MI+ IDLILH+ + YRH+LYN ++   ++ Q L+WK   ++LLLD
Subjt:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD

AT1G01020.2 Arv1-like protein1.8e-2658.62Show/hide
Query:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD
        +RCV CGFR   LF+ YSPGN+ LMKC NCK VAD+YIECE MI+ IDLILH+ + YRH+LYN ++   ++ Q L+WK   ++LLLD
Subjt:  NRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD

AT4G01510.1 Arv1-like protein1.6e-2757.65Show/hide
Query:  CVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD
        CV+CG +   LF+ YSPGN  LMKC+NC+ VAD+Y+ECE++I+ IDLILHK +AYRHLLYN+++++  + Q L+WK  L++LLLD
Subjt:  CVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGAGACAAACGGGAATCGTTGTGTGCAGTGTGGATTTAGAACGAATCAACTGTTCGTTCTGTACTCACCCGGGAACATGCATCTTATGAAATGCGACAACTG
CAAATCCGTTGCGGACGATTACATTGAATGCGAAGTGATGATTCTTCTAATCGATTTGATACTGCACAAGTGCCAAGCTTACAGACATTTGCTCTACAACCTACTTGATA
GAGATCGCTTGTCTTGTCAGGATTTGATGTGGAAGTTTGGTCTAAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCGTTGGGAAGTCTCCCCTAGGGGTGTCTTGTCC
TTCTCGTACTTTACTATTGACATCATACTTTTTTCTTTTGACACATATAATCTCTAG
mRNA sequenceShow/hide mRNA sequence
GCTGGGTCGAGAAAAGAGAGCGACAGATGGCAATTGGGCAAAAAACCCTTATGAAGTATGAACTTGATTCAAAATACTAAGACCTAAATTTGGGTCAACTTCTTCGATTG
CGTCGCTGGATCACTCACTCGGATTTCGTCAATGGGAAGGGAGACAAACGGGAATCGTTGTGTGCAGTGTGGATTTAGAACGAATCAACTGTTCGTTCTGTACTCACCCG
GGAACATGCATCTTATGAAATGCGACAACTGCAAATCCGTTGCGGACGATTACATTGAATGCGAAGTGATGATTCTTCTAATCGATTTGATACTGCACAAGTGCCAAGCT
TACAGACATTTGCTCTACAACCTACTTGATAGAGATCGCTTGTCTTGTCAGGATTTGATGTGGAAGTTTGGTCTAAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCG
TTGGGAAGTCTCCCCTAGGGGTGTCTTGTCCTTCTCGTACTTTACTATTGACATCATACTTTTTTCTTTTGACACATATAATCTCTAGATTGTGTACCTTAGCAACAACC
AATTAGACAGGTACATAATTCTGAGACTAAGTGAGAAACAATCATCCATGAGCTTTTCATCAACAATTGGTATTTGTCAAAAGGTTTGCAATCGCTTATGTAACCCTTTT
TTTCGTTGCTTTAGATGTTTCATGATGATCATGTACATTTATGGAAGTTGTCGTAAAGATCTTTGTAGACTTTCATGGATGTGTCTCTCGGAAATATTGTGTTTCTTTGT
GCTCTCCATATTTTGTCGAGGGTATTTCTGAAGAGCTCAGCTGCGGTCCATAGGTAAGTTGTAAAACATTTTTAAGACTGTTGCTTTAATTTTTGAGATACACCCAGATT
GTTTTCTTCAGTTGCAACCCGCAATGGAATATGCATCCATTTGCGTGTAGGACGTCTGACTTCGATTCCTATTTGTTTGTTTCTCATTGCTTGTGCAGGTACAGGTACAA
AGACTTGTTCTTTGCCATCATTATTTCAAGTTACTTCAAGATCTTTCTTGTTAGCATGATGATCTGGGAATTTCCATCCACAGTGATCTTCATCATAGATTTATTTGTTC
TATCGTCCAATGCAGTAGCAATTAAAGTGATCACGGAGTCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGGAGCTAAGTTTTTGGCCACAAAGCTTCTT
GAGAAATGAAGTTTAAAGATGGACACTGGTACAACAGCCGACACCCTACTACATGAGGCCAGACCAGAATCCAATCATTAATTATGGAACTTCAAATTTAGAGGATGGCT
GGAGCAGGGGATCTGGCTTGTGGTTTCTTATACAGCCGGACTGATGAAAGCTATTTTCGGAATTTGAATCGGTTATTTTAAATATTGTCCATCATTTTGGTAGTTGATGT
GGTGGCTTTGAAAGGAGGTATATTTCTTGTATC
Protein sequenceShow/hide protein sequence
MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDACIQFRWEVSPRGVLS
FSYFTIDIILFSFDTYNL