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Tan0001328 (gene) of Snake gourd v1 genome

Gene IDTan0001328
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand
Genome locationLG02:85279832..85280327
RNA-Seq ExpressionTan0001328
SyntenyTan0001328
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060897.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.9e-2374.36Show/hide
Query:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG
        MGN YSSL EEQLA++FKKHD D+D KLTKEEL RAF+ LGSRW+  R KGALRAVD NGDG+IS++E+SKLI YVKG
Subjt:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG

KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.9e-1560Show/hide
Query:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK
        MGNS S           EEQLA VFK HD D DG LTKEELK+AFE LGSR+S  R + ALRA D NGDG+IS++E+ KLI Y K
Subjt:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK

KAE8652092.1 hypothetical protein Csa_021918 [Cucumis sativus]4.2e-2371.25Show/hide
Query:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGCQ
        MGN YSSL EEQLA++FKKHD D+D KLTKEEL RAF  LGSRW+ +R K A+RAVD N DG+ISL+E+SKLI YVKGC+
Subjt:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGCQ

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1558.14Show/hide
Query:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG
        MGN+ S+          EEQLA +FK HD D DGKL+KEELK+AF  LGSR+S+ R K ALRA D NGDG IS++E++KLI Y KG
Subjt:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1558.14Show/hide
Query:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG
        MGN+ S+          EEQLA +FK HD D DGKL+KEELK+AF  LGSR+S+ R K ALRA D NGDG IS++E++KLI Y KG
Subjt:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein2.0e-2371.25Show/hide
Query:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGCQ
        MGN YSSL EEQLA++FKKHD D+D KLTKEEL RAF  LGSRW+ +R K A+RAVD N DG+ISL+E+SKLI YVKGC+
Subjt:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGCQ

A0A0A0LRB6 Uncharacterized protein4.5e-1558.82Show/hide
Query:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK
        MGNS S           EEQLA VFK HD D DG LTKEELK+AFE LGSR+   R + ALRA D NGDG+IS++E+ KLI Y K
Subjt:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK

A0A2P6Q0F9 Putative EF-hand domain pair protein8.0e-1254.17Show/hide
Query:  LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGC
        + +EQ+   FK+ DG+ DGKL KEE+K AF  LGSRWS+ R + AL   D NGDGIIS EE+  LI Y   C
Subjt:  LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGC

A0A5A7V219 Putative calcium-binding protein CML109.1e-2474.36Show/hide
Query:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG
        MGN YSSL EEQLA++FKKHD D+D KLTKEEL RAF+ LGSRW+  R KGALRAVD NGDG+IS++E+SKLI YVKG
Subjt:  MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein9.1e-1660Show/hide
Query:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK
        MGNS S           EEQLA VFK HD D DG LTKEELK+AFE LGSR+S  R + ALRA D NGDG+IS++E+ KLI Y K
Subjt:  MGNSYSS--------LPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVK

SwissProt top hitse value%identityAlignment
P05933 Calmodulin7.0e-0539.06Show/hide
Query:  EEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        EE++   FK  D D +G +T EEL      LG R S       +R  D +GDG+I+ EE S++I
Subjt:  EEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

Q0DJV6 Probable calcium-binding protein CML188.2e-0633.85Show/hide
Query:  EEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIG
        E +L   F+ +D D +GK++  EL R    LG + S       +R+VD +GDG ++ +E  K++G
Subjt:  EEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIG

Q8RZB5 Probable calcium-binding protein CML103.7e-0635.06Show/hide
Query:  GNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG
        G S +  PEE++  VF+K D + DG++++ EL   FE LG   +       +   D +GDG ISL+E + L     G
Subjt:  GNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKG

Q9SRE6 Calcium-binding protein CML382.4e-0538.71Show/hide
Query:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        +L  VF   D ++DG+++ EEL+++F  LG + S      A+R  D +GDG++  EE S+LI
Subjt:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

Q9SRE7 Calcium-binding protein CML395.3e-0532.89Show/hide
Query:  MGNSYSSLPEEQ---LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        + +S+    EE+   L  VF   D ++DG+++ EELK++F+ LG + S    + A++  D +GDG++ + E + LI
Subjt:  MGNSYSSLPEEQ---LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein3.8e-0632.89Show/hide
Query:  MGNSYSSLPEEQ---LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        + +S+    EE+   L  VF   D ++DG+++ EELK++F+ LG + S    + A++  D +GDG++ + E + LI
Subjt:  MGNSYSSLPEEQ---LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

AT1G76650.1 calmodulin-like 381.7e-0638.71Show/hide
Query:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        +L  VF   D ++DG+++ EEL+++F  LG + S      A+R  D +GDG++  EE S+LI
Subjt:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

AT1G76650.3 calmodulin-like 381.7e-0638.71Show/hide
Query:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI
        +L  VF   D ++DG+++ EEL+++F  LG + S      A+R  D +GDG++  EE S+LI
Subjt:  QLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLI

AT2G41410.1 Calcium-binding EF-hand family protein5.5e-0533.82Show/hide
Query:  SLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTV-RTKGALRAVDGNGDGIISLEEVSKLI
        S+  E+L  VF+  D D++GK++ EEL R F  +G    T+      +  VDGNGDG +  ++  +++
Subjt:  SLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTV-RTKGALRAVDGNGDGIISLEEVSKLI

AT3G59440.1 Calcium-binding EF-hand family protein1.6e-0434.38Show/hide
Query:  LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYV
        L  VF+  D + DG++TKEEL  + E+LG           ++ +D NGDG + + E   L G +
Subjt:  LAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTCGTACAGTTCGTTGCCTGAAGAACAGCTTGCCTATGTTTTCAAGAAACACGACGGGGACAAAGATGGGAAGCTGACCAAAGAAGAATTGAAGAGAGCCTT
CGAGGATTTGGGCTCGAGGTGGAGCACCGTCAGAACCAAAGGAGCCCTTCGCGCTGTCGACGGTAACGGCGACGGCATCATCAGTTTGGAGGAGGTGAGTAAGCTGATTG
GGTATGTCAAAGGTTGTCAACGCTGA
mRNA sequenceShow/hide mRNA sequence
ACACAAAGCAGCTTTGTCTCCTTTCTTCTCTTCCGATTACATGGGAAACTCGTACAGTTCGTTGCCTGAAGAACAGCTTGCCTATGTTTTCAAGAAACACGACGGGGACA
AAGATGGGAAGCTGACCAAAGAAGAATTGAAGAGAGCCTTCGAGGATTTGGGCTCGAGGTGGAGCACCGTCAGAACCAAAGGAGCCCTTCGCGCTGTCGACGGTAACGGC
GACGGCATCATCAGTTTGGAGGAGGTGAGTAAGCTGATTGGGTATGTCAAAGGTTGTCAACGCTGAACTACACTCCTTTGCCGGCTACAACAGAGTTAAAATTATGTATT
TGAAGTGGGGGAAAAAAAAGCTCTTTTTATTGCATAAATATAACGTCTCACTATTGTCTCGAGTGTAATATCGACTTGTAGATTTGAATCGTGATTTTGTGGGTGTGGTC
TAATGTTTTAGAAAGAATCAAGGATAATGTAATTGTGTGCCTATTTTCCCTTTTTG
Protein sequenceShow/hide protein sequence
MGNSYSSLPEEQLAYVFKKHDGDKDGKLTKEELKRAFEDLGSRWSTVRTKGALRAVDGNGDGIISLEEVSKLIGYVKGCQR