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Tan0001353 (gene) of Snake gourd v1 genome

Gene IDTan0001353
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:98250172..98251097
RNA-Seq ExpressionTan0001353
SyntenyTan0001353
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605668.1 hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2161.24Show/hide
Query:  MVDSFILKFAAEATSSTLFIFCFFNFIILIILF-------SNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQ---LTETLNEPDRCVSFNCSDN
        M DS IL+ AAEA SSTLFIFC FN I+LIILF       S+ HQ +D   DVPLSIVIH+NTN QQNFML KN  V    +TETLNEPD   S   S +
Subjt:  MVDSFILKFAAEATSSTLFIFCFFNFIILIILF-------SNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQ---LTETLNEPDRCVSFNCSDN

Query:  NVEESDEDHEEEDEDKDDFKRRVEDFIEK
        + E+ DED E+E ED++DFKRRVE+FIEK
Subjt:  NVEESDEDHEEEDEDKDDFKRRVEDFIEK

XP_024928006.1 uncharacterized protein LOC112491100 [Ziziphus jujuba]4.1e-0437.17Show/hide
Query:  EATSSTLFIFCFFNFIILIIL-----FSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDK
        +  S++LF+FCF N II+IIL      +NF Q+N     +PLS+    +T+ +Q  +  K    ++ E  N      + N   N   E++ D EEE+ED 
Subjt:  EATSSTLFIFCFFNFIILIIL-----FSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDK

Query:  DDFKRRVEDFIEK
        D+ +RRVE+FIEK
Subjt:  DDFKRRVEDFIEK

XP_031742158.1 probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]3.3e-2256.06Show/hide
Query:  MVDSFILKFAAEATSSTLFIFCFFNFIILIILF------SNFHQQNDDDYDVPLSIVIHNNTN-TQQNFMLHKNFTV---QLTETLNEPDRCVSFNCS--
        M DS IL+ AA+ATSSTLFIFCFFN IIL+I F      S+F QQNDD+ D+PLSIVIH+ TN T+QN ML K+  V   ++ E+ NE +RCV+FNC+  
Subjt:  MVDSFILKFAAEATSSTLFIFCFFNFIILIILF------SNFHQQNDDDYDVPLSIVIHNNTN-TQQNFMLHKNFTV---QLTETLNEPDRCVSFNCS--

Query:  -DNNVEESDEDHEEEDEDKDDFKRRVEDFIEK
         + + +++++D+E+EDED+DDF++RVE+FIEK
Subjt:  -DNNVEESDEDHEEEDEDKDDFKRRVEDFIEK

TrEMBL top hitse value%identityAlignment
A0A6P6G1P3 uncharacterized protein LOC1124911002.0e-0437.17Show/hide
Query:  EATSSTLFIFCFFNFIILIIL-----FSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDK
        +  S++LF+FCF N II+IIL      +NF Q+N     +PLS+    +T+ +Q  +  K    ++ E  N      + N   N   E++ D EEE+ED 
Subjt:  EATSSTLFIFCFFNFIILIIL-----FSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDK

Query:  DDFKRRVEDFIEK
        D+ +RRVE+FIEK
Subjt:  DDFKRRVEDFIEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTCTTTCATTTTGAAATTTGCTGCTGAGGCAACTTCCAGTACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCCAATTTTCA
TCAGCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTCACAATAACACAAATACACAACAAAACTTCATGCTTCACAAAAATTTCACTGTTCAACTAACAG
AGACTCTAAATGAACCAGACAGATGCGTGAGTTTCAACTGCAGTGATAATAATGTTGAAGAGAGTGATGAAGATCATGAGGAAGAGGATGAGGACAAGGATGATTTCAAA
CGAAGAGTGGAAGACTTTATTGAAAAGGGTCGATTGACTGCGATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGTCAAACAACATCAAAT
TCATTATTTCCAAATAAGAACACTTCAGGGCAATGAATCAAATCCTCTTGCAGATCTTAGTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTCTTTCATTTTGAAATTTGCTGCTGAGGCAACTTCCAGTACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCCAATTTTCA
TCAGCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTCACAATAACACAAATACACAACAAAACTTCATGCTTCACAAAAATTTCACTGTTCAACTAACAG
AGACTCTAAATGAACCAGACAGATGCGTGAGTTTCAACTGCAGTGATAATAATGTTGAAGAGAGTGATGAAGATCATGAGGAAGAGGATGAGGACAAGGATGATTTCAAA
CGAAGAGTGGAAGACTTTATTGAAAAGGGTCGATTGACTGCGATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGTCAAACAACATCAAAT
TCATTATTTCCAAATAAGAACACTTCAGGGCAATGAATCAAATCCTCTTGCAGATCTTAGTAGTTAA
Protein sequenceShow/hide protein sequence
MVDSFILKFAAEATSSTLFIFCFFNFIILIILFSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDKDDFK
RRVEDFIEKGRLTAISTWLHIFLRAILFTRGVKQHQIHYFQIRTLQGNESNPLADLSS