; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001368 (gene) of Snake gourd v1 genome

Gene IDTan0001368
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG06:76293893..76294465
RNA-Seq ExpressionTan0001368
SyntenyTan0001368
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050710.1 hypothetical protein E6C27_scaffold560G00040 [Cucumis melo var. makuwa]1.3e-5965.15Show/hide
Query:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS
        MA+F R    GT ADLHHLRPLPIPG   PLVACRICDAVFSSSQALINHIGAHV+D+G   A SRR   Q  Q  RFP GP F TP R TA+FLP+RFS
Subjt:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS

Query:  APNSLGFDAAESLWPN-QLSPFARSLFREAPPP-------VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL
        +PNS+GF+ AES+W N Q+SPF RS+FR+  PP       VGQYF   N    +E  GDCTKPYINQLEKC+PKV  G EEDD R LY  K+DLTLKL
Subjt:  APNSLGFDAAESLWPN-QLSPFARSLFREAPPP-------VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL

KAB1219262.1 hypothetical protein CJ030_MR3G001255 [Morella rubra]5.2e-0831.94Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGGAAAASRR----QNQQRNQMHRFPPGPPFSTP-PRGTAL-----FLPSRFSAPNS-----L
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++  A    R       +    M+ F P    + P P G  L      LP      +S     L
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGGAAAASRR----QNQQRNQMHRFPPGPPFSTP-PRGTAL-----FLPSRFSAPNS-----L

Query:  GFD---AAESLWPNQLSPFARSLFREAPPPVGQYFANWNAATAEEAAGDCTKPYINQLE---KCIPKVANGAEEDDGRHLYFCKLDLTLKL
        G D   A+    P Q  P AR+ F  AP    +     +   AE+   DCTKPY+NQL+     +  +   +++ + +      LDL LKL
Subjt:  GFD---AAESLWPNQLSPFARSLFREAPPPVGQYFANWNAATAEEAAGDCTKPYINQLE---KCIPKVANGAEEDDGRHLYFCKLDLTLKL

KAB8495643.1 hypothetical protein FH972_025385 [Carpinus fangiana]2.5e-1037.5Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFP---------PGPPFSTPPRGTALFLPSRFSAPN----------SL
        P  S   +ACR+CD VF S+QALINHI +H+A++   AA+  R  Q R    R P           P F+T P    L L  R S P+          S 
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFP---------PGPPFSTPPRGTALFLPSRFSAPN----------SL

Query:  GFDAAESLWPNQLSPFARSLFREAP-----PPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYF--CKLDLTLKL
              +L P Q+SP AR     AP      P GQ          EE  GDCTKPY++QLE  I  V   A+ +D     F   KLDL LKL
Subjt:  GFDAAESLWPNQLSPFARSLFREAP-----PPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYF--CKLDLTLKL

KAE8651808.1 hypothetical protein Csa_006798 [Cucumis sativus]1.0e-5965.48Show/hide
Query:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS
        MA+F R     T ADLHHLRPLPIPG   PLVACRICDAVFSSSQALINHIGAHV+D+G   A SRR  Q  +Q  RFP GP F T PR TA+FLP+R+S
Subjt:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS

Query:  APNSLGFDAAESLWPNQLSPFARSLFREA-----PPP--VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL
        +PN +GF+ AES+W NQ+SPF RS+FRE      PPP  +GQYF N   A  E   GDCTKPYINQLEKC+PKV NG EEDD R LY  K+DLTLKL
Subjt:  APNSLGFDAAESLWPNQLSPFARSLFREA-----PPP--VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL

KAG6574909.1 hypothetical protein SDJN03_25548, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7176.14Show/hide
Query:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDG-GAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRF
        MAEF R+    TAADLHHLRPLPIPG   PLVACRICDAVFSSSQALINHIGAHV+D+G  +AAASRRQ+QQR+Q HR PPG     PPR TA+FLPSR+
Subjt:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDG-GAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRF

Query:  SA-PNSLGFDAAESLWPNQLSPFARSLFREA----PPPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKV-ANGAEEDDGRHLYFCKLDLTLKL
        S  PNSLGFDAAESLWPNQLSPFARSLFRE     PPPVGQY  NWNA  AEEA GDCTKPYINQLEKC+PKV   G EEDDGR LYF KLDL+L+L
Subjt:  SA-PNSLGFDAAESLWPNQLSPFARSLFREA----PPPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKV-ANGAEEDDGRHLYFCKLDLTLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LNN3 C2H2-type domain-containing protein1.4e-5164.25Show/hide
Query:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS
        MA+F R     T ADLHHLRPLPIPG   PLVACRICDAVFSSSQALINHIGAHV+D+G   A SRR  Q  +Q  RFP GP F T PR TA+FLP+R+S
Subjt:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS

Query:  APNSLGFDAAESLWPNQLSPFARSLFREA-----PPP--VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAE
        +PN +GF+ AES+W NQ+SPF RS+FRE      PPP  +GQYF N   A  E   GDCTKPYINQLEKC+PKV  G E
Subjt:  APNSLGFDAAESLWPNQLSPFARSLFREA-----PPP--VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAE

A0A2N9E7H8 C2H2-type domain-containing protein5.5e-1132.97Show/hide
Query:  VACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHR------FPPGPPFSTPPRGTALFLPSRFSAPNSLGFDAAESLW-----------
        +ACR+CD VF S+QALINHI +H+ ++   +    R N+      R      F P      PPR T     +R      L        +           
Subjt:  VACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHR------FPPGPPFSTPPRGTALFLPSRFSAPNSLGFDAAESLW-----------

Query:  -PNQLSPFARSLFREAPPPVGQYFANWNAA---TAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLY--FCKLDLTLKL
         P  +SP AR+ F  A PP  Q+  +   A     EE +GDCTKPY+NQL+  I K+ +  + +D  +      KLDL LKL
Subjt:  -PNQLSPFARSLFREAPPPVGQYFANWNAA---TAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLY--FCKLDLTLKL

A0A5A7U6B7 C2H2-type domain-containing protein6.3e-6065.15Show/hide
Query:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS
        MA+F R    GT ADLHHLRPLPIPG   PLVACRICDAVFSSSQALINHIGAHV+D+G   A SRR   Q  Q  RFP GP F TP R TA+FLP+RFS
Subjt:  MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFS

Query:  APNSLGFDAAESLWPN-QLSPFARSLFREAPPP-------VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL
        +PNS+GF+ AES+W N Q+SPF RS+FR+  PP       VGQYF   N    +E  GDCTKPYINQLEKC+PKV  G EEDD R LY  K+DLTLKL
Subjt:  APNSLGFDAAESLWPN-QLSPFARSLFREAPPP-------VGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL

A0A5N6L1V8 C2H2-type domain-containing protein1.2e-1037.5Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFP---------PGPPFSTPPRGTALFLPSRFSAPN----------SL
        P  S   +ACR+CD VF S+QALINHI +H+A++   AA+  R  Q R    R P           P F+T P    L L  R S P+          S 
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFP---------PGPPFSTPPRGTALFLPSRFSAPN----------SL

Query:  GFDAAESLWPNQLSPFARSLFREAP-----PPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYF--CKLDLTLKL
              +L P Q+SP AR     AP      P GQ          EE  GDCTKPY++QLE  I  V   A+ +D     F   KLDL LKL
Subjt:  GFDAAESLWPNQLSPFARSLFREAP-----PPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYF--CKLDLTLKL

A0A6A1W232 C2H2-type domain-containing protein2.5e-0831.94Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGGAAAASRR----QNQQRNQMHRFPPGPPFSTP-PRGTAL-----FLPSRFSAPNS-----L
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++  A    R       +    M+ F P    + P P G  L      LP      +S     L
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGGAAAASRR----QNQQRNQMHRFPPGPPFSTP-PRGTAL-----FLPSRFSAPNS-----L

Query:  GFD---AAESLWPNQLSPFARSLFREAPPPVGQYFANWNAATAEEAAGDCTKPYINQLE---KCIPKVANGAEEDDGRHLYFCKLDLTLKL
        G D   A+    P Q  P AR+ F  AP    +     +   AE+   DCTKPY+NQL+     +  +   +++ + +      LDL LKL
Subjt:  GFD---AAESLWPNQLSPFARSLFREAPPPVGQYFANWNAATAEEAAGDCTKPYINQLE---KCIPKVANGAEEDDGRHLYFCKLDLTLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAATTCTGCCGCAGCACCGTCCAAGGAACCGCCGCCGATCTCCATCATCTACGGCCGCTTCCGATTCCCGGCGGCAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATTAACCACATCGGAGCTCACGTCGCCGACGATGGCGGCGCAGCAGCAGCTTCCAGAAGACAGAATCAACAACGAAACC
AAATGCATCGGTTCCCGCCTGGTCCGCCGTTCTCGACGCCGCCGCGAGGGACGGCGCTGTTTTTGCCGAGCAGATTTTCGGCGCCTAATTCGCTAGGTTTTGACGCGGCC
GAATCGCTTTGGCCAAATCAACTCTCTCCATTTGCTAGAAGCCTGTTCAGAGAGGCGCCGCCGCCCGTCGGCCAGTACTTTGCGAATTGGAATGCGGCGACGGCGGAGGA
GGCGGCCGGCGACTGTACGAAGCCTTATATAAATCAATTGGAGAAATGTATACCGAAAGTGGCCAATGGAGCTGAAGAAGACGACGGTCGTCATCTGTATTTCTGCAAAC
TGGATTTGACTCTGAAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAATTCTGCCGCAGCACCGTCCAAGGAACCGCCGCCGATCTCCATCATCTACGGCCGCTTCCGATTCCCGGCGGCAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATTAACCACATCGGAGCTCACGTCGCCGACGATGGCGGCGCAGCAGCAGCTTCCAGAAGACAGAATCAACAACGAAACC
AAATGCATCGGTTCCCGCCTGGTCCGCCGTTCTCGACGCCGCCGCGAGGGACGGCGCTGTTTTTGCCGAGCAGATTTTCGGCGCCTAATTCGCTAGGTTTTGACGCGGCC
GAATCGCTTTGGCCAAATCAACTCTCTCCATTTGCTAGAAGCCTGTTCAGAGAGGCGCCGCCGCCCGTCGGCCAGTACTTTGCGAATTGGAATGCGGCGACGGCGGAGGA
GGCGGCCGGCGACTGTACGAAGCCTTATATAAATCAATTGGAGAAATGTATACCGAAAGTGGCCAATGGAGCTGAAGAAGACGACGGTCGTCATCTGTATTTCTGCAAAC
TGGATTTGACTCTGAAGCTGTGA
Protein sequenceShow/hide protein sequence
MAEFCRSTVQGTAADLHHLRPLPIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGGAAAASRRQNQQRNQMHRFPPGPPFSTPPRGTALFLPSRFSAPNSLGFDAA
ESLWPNQLSPFARSLFREAPPPVGQYFANWNAATAEEAAGDCTKPYINQLEKCIPKVANGAEEDDGRHLYFCKLDLTLKL