; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001370 (gene) of Snake gourd v1 genome

Gene IDTan0001370
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationLG07:15588674..15589393
RNA-Seq ExpressionTan0001370
SyntenyTan0001370
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035265.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-8179.19Show/hide
Query:  LNKLSFTAAPPSAVHDPPESYSGSG---DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI--PAGVHKKAIKSFTVVQFSP
        +++  FTAA PSA+H+P +S SG G   D+SFDTNVVMVLSVLLCALICSLGLNSIIRCA KCSRIVVS DHR P+     P GVHKKAIKSFTVVQFSP
Subjt:  LNKLSFTAAPPSAVHDPPESYSGSG---DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI--PAGVHKKAIKSFTVVQFSP

Query:  ELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPEGPVR
        ELN PG+D+ECIICLSDFAAGDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTCQKIAGVG+S S+S QPPS PPP V+NL P+D EGPVR
Subjt:  ELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPEGPVR

XP_004147380.1 RING-H2 finger protein ATL78 [Cucumis sativus]6.2e-8273.13Show/hide
Query:  VYTSTHGEELYYSRKLFL---LNKLSFT---AAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI
        +Y   H +  +YSRKL L   L+KLSFT   AAPPSAVHD  E YSG   ++FDTNVVMVLSVLLCALICSL LNSIIRCALKCSR++VS+DHR      
Subjt:  VYTSTHGEELYYSRKLFL---LNKLSFT---AAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI

Query:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGT-----SASSSVQP
          GVHKKAIKSFTVVQFS +LNLPGLD EC+ICLS+FA GDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTC+KIAGV +     S+SSS   
Subjt:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGT-----SASSSVQP

Query:  PSPPPP--VVVNLAPLDPEGPVRNLRV
        PSPPPP  VVV+LAPL+PE PVRNLR+
Subjt:  PSPPPP--VVVNLAPLDPEGPVRNLRV

XP_008460910.1 PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo]5.5e-8673.25Show/hide
Query:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI
        ++ + T+ H E   YSRKL L   L+KLSFTAA PSAVHD  E YSG   ++FDTNVVMVLSVLLCALICSL LNS+IRCALKCSR +VS+DHRR  A  
Subjt:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI

Query:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------
          GVHKKAIKSFTVVQFSP+LNLPGLD+EC+ICLS+F  GDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTC+KIAGV  SAS+S        
Subjt:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------

Query:  --PPSPPPPVVVNLAPLDPEGPVRNLRV
          PP PPP VVVNLAPL+PE PVRNLR+
Subjt:  --PPSPPPPVVVNLAPLDPEGPVRNLRV

XP_023007244.1 RING-H2 finger protein ATL78-like [Cucurbita maxima]3.7e-9079.37Show/hide
Query:  MSIVYTSTHG-EELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSG-DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSA--A
        MSI++TS HG +E +YSRKL       FTAA PSA+H+P +S SG G D+SFDTNVVMVLSVLLCALICSLGLNSIIRCA KCSRIVVS DHR PSA  A
Subjt:  MSIVYTSTHG-EELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSG-DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSA--A

Query:  IPAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSV--QPPS
        +P GVHKKAIKSFTVVQFSPELN PG+D+ECIICLSDFAAGDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTCQKIAGVGTS S+S   QPPS
Subjt:  IPAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSV--QPPS

Query:  PPPPVVVNLAPLDPEGPVRNLRV
         PPP V+NL P+D EGPVRNLRV
Subjt:  PPPPVVVNLAPLDPEGPVRNLRV

XP_038901957.1 RING-H2 finger protein ATL78-like [Benincasa hispida]9.3e-8676.71Show/hide
Query:  TSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSG--SGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAIPA-
        +++H EE +YSRKL L   L+KLSFTAA PS +HD  E YSG  SGD++FDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR V+SDD RR S+  PA 
Subjt:  TSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSG--SGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAIPA-

Query:  -GVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPP
         GVHKKAIKSFTVVQFSP LNLPGLD+EC+ICLSDFAAG+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLV TCQKIAGV T++       SPPPP
Subjt:  -GVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPP

Query:  VVVNLAPLDPEGPVRNLRV
         VV +APLD E PVRNLR+
Subjt:  VVVNLAPLDPEGPVRNLRV

TrEMBL top hitse value%identityAlignment
A0A0A0LQ73 RING-type E3 ubiquitin transferase3.0e-8273.13Show/hide
Query:  VYTSTHGEELYYSRKLFL---LNKLSFT---AAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI
        +Y   H +  +YSRKL L   L+KLSFT   AAPPSAVHD  E YSG   ++FDTNVVMVLSVLLCALICSL LNSIIRCALKCSR++VS+DHR      
Subjt:  VYTSTHGEELYYSRKLFL---LNKLSFT---AAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI

Query:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGT-----SASSSVQP
          GVHKKAIKSFTVVQFS +LNLPGLD EC+ICLS+FA GDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTC+KIAGV +     S+SSS   
Subjt:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGT-----SASSSVQP

Query:  PSPPPP--VVVNLAPLDPEGPVRNLRV
        PSPPPP  VVV+LAPL+PE PVRNLR+
Subjt:  PSPPPP--VVVNLAPLDPEGPVRNLRV

A0A1S3CDJ3 RING-type E3 ubiquitin transferase2.6e-8673.25Show/hide
Query:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI
        ++ + T+ H E   YSRKL L   L+KLSFTAA PSAVHD  E YSG   ++FDTNVVMVLSVLLCALICSL LNS+IRCALKCSR +VS+DHRR  A  
Subjt:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI

Query:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------
          GVHKKAIKSFTVVQFSP+LNLPGLD+EC+ICLS+F  GDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTC+KIAGV  SAS+S        
Subjt:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------

Query:  --PPSPPPPVVVNLAPLDPEGPVRNLRV
          PP PPP VVVNLAPL+PE PVRNLR+
Subjt:  --PPSPPPPVVVNLAPLDPEGPVRNLRV

A0A5A7TCX2 RING-type E3 ubiquitin transferase2.6e-8673.25Show/hide
Query:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI
        ++ + T+ H E   YSRKL L   L+KLSFTAA PSAVHD  E YSG   ++FDTNVVMVLSVLLCALICSL LNS+IRCALKCSR +VS+DHRR  A  
Subjt:  MSIVYTSTHGEELYYSRKLFL---LNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAI

Query:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------
          GVHKKAIKSFTVVQFSP+LNLPGLD+EC+ICLS+F  GDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTC+KIAGV  SAS+S        
Subjt:  PAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQ------

Query:  --PPSPPPPVVVNLAPLDPEGPVRNLRV
          PP PPP VVVNLAPL+PE PVRNLR+
Subjt:  --PPSPPPPVVVNLAPLDPEGPVRNLRV

A0A6J1G7G9 RING-type E3 ubiquitin transferase4.5e-7877.16Show/hide
Query:  LNKLSFTAAPPSAVHDPPESYSGSG---DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHR--RPSAAIPAGVHKKAIKSFTVVQFSP
        +++  FTAA PSA+H+P +S SG G   D+SFDTNVVMVLSVLLCALICSLGLNSIIRCA KCSRIVVS DHR    + A P GVHKKAIKSFTVVQFSP
Subjt:  LNKLSFTAAPPSAVHDPPESYSGSG---DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHR--RPSAAIPAGVHKKAIKSFTVVQFSP

Query:  ELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPEGPVR
        ELN PG+D+ECIICLSDFAAGDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTCQKIAGVG+S S+S QPP P    ++NL P+D EGPVR
Subjt:  ELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPEGPVR

A0A6J1L4E9 RING-type E3 ubiquitin transferase1.8e-9079.37Show/hide
Query:  MSIVYTSTHG-EELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSG-DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSA--A
        MSI++TS HG +E +YSRKL       FTAA PSA+H+P +S SG G D+SFDTNVVMVLSVLLCALICSLGLNSIIRCA KCSRIVVS DHR PSA  A
Subjt:  MSIVYTSTHG-EELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSG-DSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSA--A

Query:  IPAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSV--QPPS
        +P GVHKKAIKSFTVVQFSPELN PG+D+ECIICLSDFAAGDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTCQKIAGVGTS S+S   QPPS
Subjt:  IPAGVHKKAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSV--QPPS

Query:  PPPPVVVNLAPLDPEGPVRNLRV
         PPP V+NL P+D EGPVRNLRV
Subjt:  PPPPVVVNLAPLDPEGPVRNLRV

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL102.0e-4645.02Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RIVVSDDHRRPSA---AIPAGVHKKAIKSF
        + SRKL L N          AV   P     + +++   NV+M+LS+L+C +IC LGL+ IIRCAL+ S R ++S+     S+   +   G+ KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RIVVSDDHRRPSA---AIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASS---------------------
         VV +SPE+NLPGLD EC+ICLSDF +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A S                     
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASS---------------------

Query:  ---SVQPPSPPPPVVVNLAPLDPEGPVRNLR
           ++ P  P   V+V +APL+PEG V  +R
Subjt:  ---SVQPPSPPPPVVVNLAPLDPEGPVRNLR

Q6NML0 E3 ubiquitin-protein ligase ATL761.7e-4546.86Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF
        + +RKL L +     +    AV   P     + +++   NV+M+LSVL+C +IC LGL+ IIRCA  + SR ++S+       P ++   G+ KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE
         VV +S E+NLPG+  EC+ICLSDF +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A S     +P   V+V + PL+PE
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE

Query:  GPVRNLR
        G V   R
Subjt:  GPVRNLR

Q6NQG7 RING-H2 finger protein ATL782.0e-5456.31Show/hide
Query:  YSRK-LFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSD--DHRRPSAAIPAGVHKKAIKSFTV
        YSRK LF  +  S T AP   V          GD++FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS +V S+      P      GV +KA+KSF  
Subjt:  YSRK-LFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSD--DHRRPSAAIPAGVHKKAIKSFTV

Query:  VQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVG-TSASSSVQPPSPPPPVVVNLAPLDPEG
        V +S ELNLPGLD EC ICLS+F A ++++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QTC+KIA    TS+ +S QPP     +++ +APL+PE 
Subjt:  VQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVG-TSASSSVQPPSPPPPVVVNLAPLDPEG

Query:  PVRNLR
         +R  R
Subjt:  PVRNLR

Q94BY6 RING-H2 finger protein ATL754.4e-4647.34Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF
        + SRKL L N          AV   P     + +++   NV+M+LSVL+C +IC LGL+ IIRCA  + S  ++S+       P  +   G++KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE
         VV +SPE+NLPGL  EC+ICLSDF +G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A       +P   V+V +APL+PE
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE

Query:  GPVRNLR
        G V  LR
Subjt:  GPVRNLR

Q9LS99 RING-H2 finger protein ATL771.0e-4245.07Show/hide
Query:  HGEELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-IVVSDDHRRPS----AAIPAGVHK
        H  + + SRK  LL ++ F A      H P +       ++   NV+M+LS+LLC +ICSLGL+ IIRCA   SR  ++SD    PS    +++  G+ K
Subjt:  HGEELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-IVVSDDHRRPS----AAIPAGVHK

Query:  KAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNL
        KA+K   VV +SPE+NLPG+  EC+ICLSDF AG++LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV TCQK+     +A       +    + + +
Subjt:  KAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNL

Query:  APLDPEGPVRNLR
        +PL+PE  V   R
Subjt:  APLDPEGPVRNLR

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein3.1e-4747.34Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF
        + SRKL L N          AV   P     + +++   NV+M+LSVL+C +IC LGL+ IIRCA  + S  ++S+       P  +   G++KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE
         VV +SPE+NLPGL  EC+ICLSDF +G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A       +P   V+V +APL+PE
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE

Query:  GPVRNLR
        G V  LR
Subjt:  GPVRNLR

AT1G49210.1 RING/U-box superfamily protein1.2e-4646.86Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF
        + +RKL L +     +    AV   P     + +++   NV+M+LSVL+C +IC LGL+ IIRCA  + SR ++S+       P ++   G+ KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRIVVSD---DHRRPSAAIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE
         VV +S E+NLPG+  EC+ICLSDF +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A S     +P   V+V + PL+PE
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPE

Query:  GPVRNLR
        G V   R
Subjt:  GPVRNLR

AT1G49220.1 RING/U-box superfamily protein1.4e-4745.02Show/hide
Query:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RIVVSDDHRRPSA---AIPAGVHKKAIKSF
        + SRKL L N          AV   P     + +++   NV+M+LS+L+C +IC LGL+ IIRCAL+ S R ++S+     S+   +   G+ KKA++ F
Subjt:  YYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RIVVSDDHRRPSA---AIPAGVHKKAIKSF

Query:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASS---------------------
         VV +SPE+NLPGLD EC+ICLSDF +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  + A S                     
Subjt:  TVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASS---------------------

Query:  ---SVQPPSPPPPVVVNLAPLDPEGPVRNLR
           ++ P  P   V+V +APL+PEG V  +R
Subjt:  ---SVQPPSPPPPVVVNLAPLDPEGPVRNLR

AT1G49230.1 RING/U-box superfamily protein1.4e-5556.31Show/hide
Query:  YSRK-LFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSD--DHRRPSAAIPAGVHKKAIKSFTV
        YSRK LF  +  S T AP   V          GD++FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS +V S+      P      GV +KA+KSF  
Subjt:  YSRK-LFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSD--DHRRPSAAIPAGVHKKAIKSFTV

Query:  VQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVG-TSASSSVQPPSPPPPVVVNLAPLDPEG
        V +S ELNLPGLD EC ICLS+F A ++++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QTC+KIA    TS+ +S QPP     +++ +APL+PE 
Subjt:  VQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVG-TSASSSVQPPSPPPPVVVNLAPLDPEG

Query:  PVRNLR
         +R  R
Subjt:  PVRNLR

AT3G18773.1 RING/U-box superfamily protein7.2e-4445.07Show/hide
Query:  HGEELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-IVVSDDHRRPS----AAIPAGVHK
        H  + + SRK  LL ++ F A      H P +       ++   NV+M+LS+LLC +ICSLGL+ IIRCA   SR  ++SD    PS    +++  G+ K
Subjt:  HGEELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-IVVSDDHRRPS----AAIPAGVHK

Query:  KAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNL
        KA+K   VV +SPE+NLPG+  EC+ICLSDF AG++LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV TCQK+     +A       +    + + +
Subjt:  KAIKSFTVVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNL

Query:  APLDPEGPVRNLR
        +PL+PE  V   R
Subjt:  APLDPEGPVRNLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATAGTTTACACTTCCACTCATGGAGAAGAGTTGTATTACTCTAGGAAACTCTTCCTCCTCAACAAGCTCTCCTTCACCGCCGCCCCTCCCTCCGCCGTCCATGA
CCCTCCAGAATCATACTCCGGCAGTGGCGACAGCAGCTTCGACACGAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGGCCTCAACTCCA
TCATCAGATGCGCTTTGAAATGCTCCCGAATCGTCGTCTCAGACGACCACCGCCGCCCCTCGGCTGCCATCCCTGCCGGAGTCCACAAGAAGGCCATCAAGAGCTTCACG
GTGGTTCAATTCTCGCCGGAGCTCAACCTCCCCGGGCTGGACGCCGAGTGCATCATTTGCCTGTCGGACTTCGCCGCCGGCGACAAGCTTCGGCTACTCCCCAAGTGTAA
CCATGGATTCCATGTTAAGTGTATAGATAAGTGGTTGAGTTCTCATTCCTCTTGCCCTAAATGTCGTCAGTGTTTAGTTCAAACTTGTCAGAAGATCGCCGGCGTTGGCA
CCTCCGCTTCCAGCTCCGTTCAACCGCCGTCTCCTCCGCCGCCTGTGGTTGTGAACTTAGCGCCGCTGGATCCCGAAGGTCCGGTACGGAATTTAAGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
TCAAAACTCCAACAATTCACAAAAACCATAAAAAAAAAATGTCAATAGTTTACACTTCCACTCATGGAGAAGAGTTGTATTACTCTAGGAAACTCTTCCTCCTCAACAAG
CTCTCCTTCACCGCCGCCCCTCCCTCCGCCGTCCATGACCCTCCAGAATCATACTCCGGCAGTGGCGACAGCAGCTTCGACACGAATGTCGTCATGGTCCTCTCCGTCCT
CCTCTGCGCCTTAATCTGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCCCGAATCGTCGTCTCAGACGACCACCGCCGCCCCTCGGCTGCCATCC
CTGCCGGAGTCCACAAGAAGGCCATCAAGAGCTTCACGGTGGTTCAATTCTCGCCGGAGCTCAACCTCCCCGGGCTGGACGCCGAGTGCATCATTTGCCTGTCGGACTTC
GCCGCCGGCGACAAGCTTCGGCTACTCCCCAAGTGTAACCATGGATTCCATGTTAAGTGTATAGATAAGTGGTTGAGTTCTCATTCCTCTTGCCCTAAATGTCGTCAGTG
TTTAGTTCAAACTTGTCAGAAGATCGCCGGCGTTGGCACCTCCGCTTCCAGCTCCGTTCAACCGCCGTCTCCTCCGCCGCCTGTGGTTGTGAACTTAGCGCCGCTGGATC
CCGAAGGTCCGGTACGGAATTTAAGGGTGTAAAGAAAAAATAATTAATACGAATTAGGAG
Protein sequenceShow/hide protein sequence
MSIVYTSTHGEELYYSRKLFLLNKLSFTAAPPSAVHDPPESYSGSGDSSFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRIVVSDDHRRPSAAIPAGVHKKAIKSFT
VVQFSPELNLPGLDAECIICLSDFAAGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCQKIAGVGTSASSSVQPPSPPPPVVVNLAPLDPEGPVRNLRV